RNA–Protein interactions for RNA: ENST00000486975.1

CLDN11-207, Transcript of claudin 11, humanhuman

TSL 2 BASIC

Gene CLDN11, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-207ENST00000486975 RANGRFQ9HD47 186 aaPredicted RBP11.09□□□□□ -0.63
CLDN11-207ENST00000486975 MRPS7Q9Y2R9 242 aaKnown RBP11.09□□□□□ -0.63
CLDN11-207ENST00000486975 DNAH9Q9NYC9 4486 aa11.09□□□□□ -0.63
CLDN11-207ENST00000486975 TRAV18A0A075B6X5 111 aa11.08□□□□□ -0.64
CLDN11-207ENST00000486975 IGKV1D-13A0A0B4J2D9 117 aa11.08□□□□□ -0.64
CLDN11-207ENST00000486975 C13orf42A0A1B0GVH6 325 aa11.08□□□□□ -0.64
CLDN11-207ENST00000486975 SAP30O75446 220 aa11.08□□□□□ -0.64
CLDN11-207ENST00000486975 IGKV1-13P0DP09 117 aa11.08□□□□□ -0.64
CLDN11-207ENST00000486975 EIF4EBP1Q13541 118 aaPredicted RBP11.08□□□□□ -0.64
CLDN11-207ENST00000486975 CDK10Q15131 360 aa11.08□□□□□ -0.64
CLDN11-207ENST00000486975 HOGA1Q86XE5 327 aa11.08□□□□□ -0.64
CLDN11-207ENST00000486975 CROCCP3Q8IVE0 287 aa11.08□□□□□ -0.64
CLDN11-207ENST00000486975 BEST4Q8NFU0 473 aa11.08□□□□□ -0.64
CLDN11-207ENST00000486975 OR5T1Q8NG75 326 aa11.08□□□□□ -0.64
CLDN11-207ENST00000486975 SRSF12Q8WXF0 261 aaKnown RBP11.08□□□□□ -0.64
CLDN11-207ENST00000486975 ZNF355PQ9NSJ1 428 aa11.08□□□□□ -0.64
CLDN11-207ENST00000486975 SPATA2Q9UM82 520 aa11.08□□□□□ -0.64
CLDN11-207ENST00000486975 COL7A1Q02388 2944 aa11.07□□□□□ -0.64
CLDN11-207ENST00000486975 MSGN1A6NI15 193 aa11.07□□□□□ -0.64
CLDN11-207ENST00000486975 SAA1P0DJI8 122 aaPredicted RBP11.07□□□□□ -0.64
CLDN11-207ENST00000486975 ZP3P21754 424 aa11.07□□□□□ -0.64
CLDN11-207ENST00000486975 RPL30P62888 115 aaKnown RBP11.07□□□□□ -0.64
CLDN11-207ENST00000486975 TNXAQ16473 311 aa11.07□□□□□ -0.64
CLDN11-207ENST00000486975 ZNF66Q6ZN08 573 aa11.07□□□□□ -0.64
CLDN11-207ENST00000486975 MMD2Q8IY49 270 aa11.07□□□□□ -0.64
CLDN11-207ENST00000486975 ADAD2Q8NCV1 583 aaKnown RBP11.07□□□□□ -0.64
CLDN11-207ENST00000486975 OR6Q1Q8NGQ2 317 aa11.07□□□□□ -0.64
CLDN11-207ENST00000486975 USMG5Q96IX5 58 aa11.07□□□□□ -0.64
CLDN11-207ENST00000486975 AUNIPQ9H7T9 357 aa11.07□□□□□ -0.64
CLDN11-207ENST00000486975 ZNF430Q9H8G1 570 aaPredicted RBP11.07□□□□□ -0.64
CLDN11-207ENST00000486975 DIABLOQ9NR28 239 aa11.07□□□□□ -0.64
CLDN11-207ENST00000486975 SORL1Q92673 2214 aa11.07□□□□□ -0.64
CLDN11-207ENST00000486975 A0A087WXM4 84 aa11.06□□□□□ -0.64
CLDN11-207ENST00000486975 J3QRK9 145 aa11.06□□□□□ -0.64
CLDN11-207ENST00000486975 FCGR3BO75015 233 aa11.06□□□□□ -0.64
CLDN11-207ENST00000486975 OR9G9P0C7N8 305 aa11.06□□□□□ -0.64
CLDN11-207ENST00000486975 CBX5P45973 191 aa11.06□□□□□ -0.64
CLDN11-207ENST00000486975 ARPC4P59998 168 aa11.06□□□□□ -0.64
CLDN11-207ENST00000486975 DYRK1AQ13627 763 aa11.06□□□□□ -0.64
CLDN11-207ENST00000486975 ZNF343Q6P1L6 599 aa11.06□□□□□ -0.64
CLDN11-207ENST00000486975 IDO2Q6ZQW0 420 aa11.06□□□□□ -0.64
CLDN11-207ENST00000486975 OR4S2Q8NH73 311 aa11.06□□□□□ -0.64
CLDN11-207ENST00000486975 VSTM2AQ8TAG5 236 aa11.06□□□□□ -0.64
CLDN11-207ENST00000486975 OR4C12Q96R67 309 aa11.06□□□□□ -0.64
CLDN11-207ENST00000486975 SPIN2AQ99865 258 aa11.06□□□□□ -0.64
CLDN11-207ENST00000486975 SPIN2BQ9BPZ2 258 aa11.06□□□□□ -0.64
CLDN11-207ENST00000486975 VCX3AQ9NNX9 186 aa11.06□□□□□ -0.64
CLDN11-207ENST00000486975 SMAD5-AS1Q9Y6J3 95 aa11.06□□□□□ -0.64
CLDN11-207ENST00000486975 TNCP24821 2201 aa11.06□□□□□ -0.64
CLDN11-207ENST00000486975 ACTL6BO94805 426 aa11.05□□□□□ -0.64
CLDN11-207ENST00000486975 TNFAIP8O95379 198 aa11.05□□□□□ -0.64
CLDN11-207ENST00000486975 MFSD4AQ8N468 514 aa11.05□□□□□ -0.64
CLDN11-207ENST00000486975 GVQW1Q8N7I0 195 aa11.05□□□□□ -0.64
CLDN11-207ENST00000486975 ZBTB34Q8NCN2 500 aa11.05□□□□□ -0.64
CLDN11-207ENST00000486975 TCTEX1D2Q8WW35 142 aa11.05□□□□□ -0.64
CLDN11-207ENST00000486975 ACOT12Q8WYK0 555 aa11.05□□□□□ -0.64
CLDN11-207ENST00000486975 YIPF6Q96EC8 236 aa11.05□□□□□ -0.64
CLDN11-207ENST00000486975 PHB2Q99623 299 aa11.05□□□□□ -0.64
CLDN11-207ENST00000486975 DCUN1D5Q9BTE7 237 aa11.05□□□□□ -0.64
CLDN11-207ENST00000486975 ELOVL1Q9BW60 279 aa11.05□□□□□ -0.64
CLDN11-207ENST00000486975 COA4Q9NYJ1 87 aa11.05□□□□□ -0.64
CLDN11-207ENST00000486975 TRBV9A0A0B4J1U6 114 aa11.04□□□□□ -0.64
CLDN11-207ENST00000486975 FAM223BA6NKX1 122 aa11.04□□□□□ -0.64
CLDN11-207ENST00000486975 XRCC3O43542 346 aa11.04□□□□□ -0.64
CLDN11-207ENST00000486975 AIREO43918 545 aa11.04□□□□□ -0.64
CLDN11-207ENST00000486975 LY86O95711 162 aa11.04□□□□□ -0.64
CLDN11-207ENST00000486975 PPYP01298 95 aa11.04□□□□□ -0.64
CLDN11-207ENST00000486975 IGLV1-51P01701 117 aa11.04□□□□□ -0.64
CLDN11-207ENST00000486975 SPNP16150 400 aa11.04□□□□□ -0.64
CLDN11-207ENST00000486975 FCGR2CP31995 323 aa11.04□□□□□ -0.64
CLDN11-207ENST00000486975 KIR2DS2P43631 304 aa11.04□□□□□ -0.64
CLDN11-207ENST00000486975 BRWD1-AS2P59051 145 aa11.04□□□□□ -0.64
CLDN11-207ENST00000486975 KLF5Q13887 457 aaPredicted RBP11.04□□□□□ -0.64
CLDN11-207ENST00000486975 FAM223AQ8IWN6 122 aa11.04□□□□□ -0.64
CLDN11-207ENST00000486975 PUSL1Q8N0Z8 303 aaKnown RBP11.04□□□□□ -0.64
CLDN11-207ENST00000486975 TSPAN14Q8NG11 270 aa11.04□□□□□ -0.64
CLDN11-207ENST00000486975 OR13F1Q8NGS4 319 aa11.04□□□□□ -0.64
CLDN11-207ENST00000486975 TMEM167AQ8TBQ9 72 aa11.04□□□□□ -0.64
CLDN11-207ENST00000486975 SNAPC3Q92966 411 aa11.04□□□□□ -0.64
CLDN11-207ENST00000486975 WWC2-AS2Q96NR7 200 aa11.04□□□□□ -0.64
CLDN11-207ENST00000486975 TAS2R8Q9NYW2 309 aa11.04□□□□□ -0.64
CLDN11-207ENST00000486975 PEF1Q9UBV8 284 aaKnown RBP11.04□□□□□ -0.64
CLDN11-207ENST00000486975 TENM3Q9P273 2699 aa11.04□□□□□ -0.64
CLDN11-207ENST00000486975 TRIM64CA6NLI5 447 aa11.03□□□□□ -0.64
CLDN11-207ENST00000486975 MPPED1O15442 326 aa11.03□□□□□ -0.64
CLDN11-207ENST00000486975 RBFOX2O43251 390 aaKnown RBP eCLIP11.03□□□□□ -0.64
CLDN11-207ENST00000486975 KBTBD11O94819 623 aa11.03□□□□□ -0.64
CLDN11-207ENST00000486975 OR2A4O95047 310 aa11.03□□□□□ -0.64
CLDN11-207ENST00000486975 GP9P14770 177 aa11.03□□□□□ -0.64
CLDN11-207ENST00000486975 MAS1LP35410 378 aa11.03□□□□□ -0.64
CLDN11-207ENST00000486975 RPS19P39019 145 aaKnown RBP11.03□□□□□ -0.64
CLDN11-207ENST00000486975 OR2B11Q5JQS5 317 aa11.03□□□□□ -0.64
CLDN11-207ENST00000486975 UBE2NLQ5JXB2 153 aa11.03□□□□□ -0.64
CLDN11-207ENST00000486975 SLC25A42Q86VD7 318 aa11.03□□□□□ -0.64
CLDN11-207ENST00000486975 TTC9CQ8N5M4 171 aa11.03□□□□□ -0.64
CLDN11-207ENST00000486975 OR5AP2Q8NGF4 316 aa11.03□□□□□ -0.64
CLDN11-207ENST00000486975 GIMAP1Q8WWP7 306 aa11.03□□□□□ -0.64
CLDN11-207ENST00000486975 S100A16Q96FQ6 103 aaKnown RBP11.03□□□□□ -0.64
CLDN11-207ENST00000486975 OR2A7Q96R45 310 aa11.03□□□□□ -0.64
CLDN11-207ENST00000486975 ANAPC10Q9UM13 185 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms