RNA–Protein interactions for RNA: ENST00000479596.5

CCNL1-222, Transcript of cyclin L1, human

TSL 3

Gene CCNL1, Length 883 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-222	ENST00000479596	ADAD2	Q8NCV1	583 aa	Known RBP	11.53	□□□□□ -0.56
CCNL1-222	ENST00000479596	SRSF12	Q8WXF0	261 aa	Known RBP	11.53	□□□□□ -0.56
CCNL1-222	ENST00000479596	GPHA2	Q96T91	129 aa		11.53	□□□□□ -0.56
CCNL1-222	ENST00000479596	STAB2	Q8WWQ8	2551 aa		11.53	□□□□□ -0.56
CCNL1-222	ENST00000479596	RYR3	Q15413	4870 aa		11.53	□□□□□ -0.56
CCNL1-222	ENST00000479596	C13orf42	A0A1B0GVH6	325 aa		11.52	□□□□□ -0.57
CCNL1-222	ENST00000479596	AIRE	O43918	545 aa		11.52	□□□□□ -0.57
CCNL1-222	ENST00000479596	TMEM127	O75204	238 aa		11.52	□□□□□ -0.57
CCNL1-222	ENST00000479596	TRBV12-3	P01733	135 aa		11.52	□□□□□ -0.57
CCNL1-222	ENST00000479596	SPN	P16150	400 aa		11.52	□□□□□ -0.57
CCNL1-222	ENST00000479596	AADAC	P22760	399 aa		11.52	□□□□□ -0.57
CCNL1-222	ENST00000479596	RPS19	P39019	145 aa	Known RBP	11.52	□□□□□ -0.57
CCNL1-222	ENST00000479596	VKORC1L1	Q8N0U8	176 aa		11.52	□□□□□ -0.57
CCNL1-222	ENST00000479596	TSPAN14	Q8NG11	270 aa		11.52	□□□□□ -0.57
CCNL1-222	ENST00000479596	ACOT12	Q8WYK0	555 aa		11.52	□□□□□ -0.57
CCNL1-222	ENST00000479596	HSD17B10	Q99714	261 aa	Known RBP	11.52	□□□□□ -0.57
CCNL1-222	ENST00000479596	COA4	Q9NYJ1	87 aa		11.52	□□□□□ -0.57
CCNL1-222	ENST00000479596	TAS2R8	Q9NYW2	309 aa		11.52	□□□□□ -0.57
CCNL1-222	ENST00000479596	PRELID3B	Q9Y3B1	194 aa		11.52	□□□□□ -0.57
CCNL1-222	ENST00000479596		A0A087WXM4	84 aa		11.51	□□□□□ -0.57
CCNL1-222	ENST00000479596		A0A0G2JLM5	398 aa		11.51	□□□□□ -0.57
CCNL1-222	ENST00000479596	ANKRD34B	A5PLL1	514 aa		11.51	□□□□□ -0.57
CCNL1-222	ENST00000479596	TRIM64C	A6NLI5	447 aa		11.51	□□□□□ -0.57
CCNL1-222	ENST00000479596	LY86	O95711	162 aa		11.51	□□□□□ -0.57
CCNL1-222	ENST00000479596	FCER2	P06734	321 aa		11.51	□□□□□ -0.57
CCNL1-222	ENST00000479596	OR9G9	P0C7N8	305 aa		11.51	□□□□□ -0.57
CCNL1-222	ENST00000479596	FCGR2C	P31995	323 aa		11.51	□□□□□ -0.57
CCNL1-222	ENST00000479596	ARPC4	P59998	168 aa		11.51	□□□□□ -0.57
CCNL1-222	ENST00000479596	LSM3	P62310	102 aa	Known RBP	11.51	□□□□□ -0.57
CCNL1-222	ENST00000479596	ZNF45	Q02386	682 aa		11.51	□□□□□ -0.57
CCNL1-222	ENST00000479596	KLF5	Q13887	457 aa	Predicted RBP	11.51	□□□□□ -0.57
CCNL1-222	ENST00000479596	TIMM50	Q3ZCQ8	353 aa		11.51	□□□□□ -0.57
CCNL1-222	ENST00000479596	ZNF343	Q6P1L6	599 aa		11.51	□□□□□ -0.57
CCNL1-222	ENST00000479596	HAPLN4	Q86UW8	402 aa		11.51	□□□□□ -0.57
CCNL1-222	ENST00000479596	MFSD4A	Q8N468	514 aa		11.51	□□□□□ -0.57
CCNL1-222	ENST00000479596	OR13F1	Q8NGS4	319 aa		11.51	□□□□□ -0.57
CCNL1-222	ENST00000479596	OR4S2	Q8NH73	311 aa		11.51	□□□□□ -0.57
CCNL1-222	ENST00000479596	TCTEX1D2	Q8WW35	142 aa		11.51	□□□□□ -0.57
CCNL1-222	ENST00000479596	PHB2	Q99623	299 aa		11.51	□□□□□ -0.57
CCNL1-222	ENST00000479596	DCUN1D5	Q9BTE7	237 aa		11.51	□□□□□ -0.57
CCNL1-222	ENST00000479596	RANGRF	Q9HD47	186 aa	Predicted RBP	11.51	□□□□□ -0.57
CCNL1-222	ENST00000479596	DIABLO	Q9NR28	239 aa		11.51	□□□□□ -0.57
CCNL1-222	ENST00000479596	CCL28	Q9NRJ3	127 aa		11.51	□□□□□ -0.57
CCNL1-222	ENST00000479596	MRPS7	Q9Y2R9	242 aa	Known RBP	11.51	□□□□□ -0.57
CCNL1-222	ENST00000479596	NBEAL2	Q6ZNJ1	2754 aa		11.51	□□□□□ -0.57
CCNL1-222	ENST00000479596		A0A1B0GW64	132 aa		11.5	□□□□□ -0.57
CCNL1-222	ENST00000479596	XRCC3	O43542	346 aa		11.5	□□□□□ -0.57
CCNL1-222	ENST00000479596	TNFAIP8	O95379	198 aa		11.5	□□□□□ -0.57
CCNL1-222	ENST00000479596	PPY	P01298	95 aa		11.5	□□□□□ -0.57
CCNL1-222	ENST00000479596	PRH1	P02810	166 aa		11.5	□□□□□ -0.57
CCNL1-222	ENST00000479596	MSMO1	Q15800	293 aa		11.5	□□□□□ -0.57
CCNL1-222	ENST00000479596	IL34	Q6ZMJ4	242 aa		11.5	□□□□□ -0.57
CCNL1-222	ENST00000479596	ZNF66	Q6ZN08	573 aa		11.5	□□□□□ -0.57
CCNL1-222	ENST00000479596	CROCCP3	Q8IVE0	287 aa		11.5	□□□□□ -0.57
CCNL1-222	ENST00000479596	MMD2	Q8IY49	270 aa		11.5	□□□□□ -0.57
CCNL1-222	ENST00000479596	PUSL1	Q8N0Z8	303 aa	Known RBP	11.5	□□□□□ -0.57
CCNL1-222	ENST00000479596	ADAM30	Q9UKF2	790 aa		11.5	□□□□□ -0.57
CCNL1-222	ENST00000479596	SORL1	Q92673	2214 aa		11.5	□□□□□ -0.57
CCNL1-222	ENST00000479596	TRBV9	A0A0B4J1U6	114 aa		11.49	□□□□□ -0.57
CCNL1-222	ENST00000479596	MEIS3P1	A6NDR6	274 aa		11.49	□□□□□ -0.57
CCNL1-222	ENST00000479596	TEX22	C9J3V5	150 aa		11.49	□□□□□ -0.57
CCNL1-222	ENST00000479596		E7EUB6	86 aa		11.49	□□□□□ -0.57
CCNL1-222	ENST00000479596	TNFSF12	O43508	249 aa		11.49	□□□□□ -0.57
CCNL1-222	ENST00000479596	KBTBD11	O94819	623 aa		11.49	□□□□□ -0.57
CCNL1-222	ENST00000479596	IGLV1-51	P01701	117 aa		11.49	□□□□□ -0.57
CCNL1-222	ENST00000479596	NHLRC4	P0CG21	123 aa	Predicted RBP	11.49	□□□□□ -0.57
CCNL1-222	ENST00000479596	GP9	P14770	177 aa		11.49	□□□□□ -0.57
CCNL1-222	ENST00000479596	ZP3	P21754	424 aa		11.49	□□□□□ -0.57
CCNL1-222	ENST00000479596	UBE2NL	Q5JXB2	153 aa		11.49	□□□□□ -0.57
CCNL1-222	ENST00000479596	C19orf35	Q6ZS72	473 aa		11.49	□□□□□ -0.57
CCNL1-222	ENST00000479596	TTC9C	Q8N5M4	171 aa		11.49	□□□□□ -0.57
CCNL1-222	ENST00000479596	OR6Q1	Q8NGQ2	317 aa		11.49	□□□□□ -0.57
CCNL1-222	ENST00000479596	TMEM167A	Q8TBQ9	72 aa		11.49	□□□□□ -0.57
CCNL1-222	ENST00000479596	SECTM1	Q8WVN6	248 aa		11.49	□□□□□ -0.57
CCNL1-222	ENST00000479596	USMG5	Q96IX5	58 aa		11.49	□□□□□ -0.57
CCNL1-222	ENST00000479596	ASCL2	Q99929	193 aa		11.49	□□□□□ -0.57
CCNL1-222	ENST00000479596	AKIP1	Q9NQ31	210 aa		11.49	□□□□□ -0.57
CCNL1-222	ENST00000479596	PEF1	Q9UBV8	284 aa	Known RBP	11.49	□□□□□ -0.57
CCNL1-222	ENST00000479596	ANAPC10	Q9UM13	185 aa		11.49	□□□□□ -0.57
CCNL1-222	ENST00000479596	MPPED1	O15442	326 aa		11.48	□□□□□ -0.57
CCNL1-222	ENST00000479596	CREBL2	O60519	120 aa	Predicted RBP	11.48	□□□□□ -0.57
CCNL1-222	ENST00000479596	OR2A4	O95047	310 aa		11.48	□□□□□ -0.57
CCNL1-222	ENST00000479596	IL6R	P08887	468 aa	Predicted RBP	11.48	□□□□□ -0.57
CCNL1-222	ENST00000479596	CBX5	P45973	191 aa		11.48	□□□□□ -0.57
CCNL1-222	ENST00000479596	RHOG	P84095	191 aa		11.48	□□□□□ -0.57
CCNL1-222	ENST00000479596	SAMD12	Q8N8I0	201 aa		11.48	□□□□□ -0.57
CCNL1-222	ENST00000479596	OR5AP2	Q8NGF4	316 aa		11.48	□□□□□ -0.57
CCNL1-222	ENST00000479596	OR2A7	Q96R45	310 aa		11.48	□□□□□ -0.57
CCNL1-222	ENST00000479596	OR4C12	Q96R67	309 aa		11.48	□□□□□ -0.57
CCNL1-222	ENST00000479596	SPIN2A	Q99865	258 aa		11.48	□□□□□ -0.57
CCNL1-222	ENST00000479596	SPIN2B	Q9BPZ2	258 aa		11.48	□□□□□ -0.57
CCNL1-222	ENST00000479596	SMAD5-AS1	Q9Y6J3	95 aa		11.48	□□□□□ -0.57
CCNL1-222	ENST00000479596	HMX3	A6NHT5	357 aa		11.47	□□□□□ -0.57
CCNL1-222	ENST00000479596	FAM223B	A6NKX1	122 aa		11.47	□□□□□ -0.57
CCNL1-222	ENST00000479596	SYNJ2BP	P57105	145 aa		11.47	□□□□□ -0.57
CCNL1-222	ENST00000479596	TAS2R20	P59543	309 aa		11.47	□□□□□ -0.57
CCNL1-222	ENST00000479596	NCS1	P62166	190 aa		11.47	□□□□□ -0.57
CCNL1-222	ENST00000479596	ZNF818P	Q6ZRF7	136 aa		11.47	□□□□□ -0.57
CCNL1-222	ENST00000479596	FAM223A	Q8IWN6	122 aa		11.47	□□□□□ -0.57
CCNL1-222	ENST00000479596	OR9G4	Q8NGQ1	327 aa		11.47	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms