RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 RAB24Q969Q5 203 aa13.17□□□□□ -0.3
FNDC1-201ENST00000297267 ZNF98A6NK75 572 aa13.16□□□□□ -0.3
FNDC1-201ENST00000297267 MARCH11A6NNE9 402 aa13.16□□□□□ -0.3
FNDC1-201ENST00000297267 CGAP01215 116 aa13.16□□□□□ -0.3
FNDC1-201ENST00000297267 ZP4Q12836 540 aa13.16□□□□□ -0.3
FNDC1-201ENST00000297267 GFI1BQ5VTD9 330 aa13.16□□□□□ -0.3
FNDC1-201ENST00000297267 LINC00305Q7Z4B0 112 aa13.16□□□□□ -0.3
FNDC1-201ENST00000297267 TMEM160Q9NX00 188 aa13.16□□□□□ -0.3
FNDC1-201ENST00000297267 RFNGQ9Y644 331 aa13.16□□□□□ -0.3
FNDC1-201ENST00000297267 GNG5P63218 68 aa13.16□□□□□ -0.3
FNDC1-201ENST00000297267 ZNF418Q8TF45 676 aaPredicted RBP13.16□□□□□ -0.3
FNDC1-201ENST00000297267 SPSB2Q99619 263 aa13.16□□□□□ -0.3
FNDC1-201ENST00000297267 HOXD4P09016 255 aaPredicted RBP13.16□□□□□ -0.3
FNDC1-201ENST00000297267 TMPRSS3P57727 454 aa13.16□□□□□ -0.3
FNDC1-201ENST00000297267 TNFRSF9Q07011 255 aa13.16□□□□□ -0.3
FNDC1-201ENST00000297267 HIST1H4GQ99525 98 aa13.16□□□□□ -0.3
FNDC1-201ENST00000297267 PILRBQ9UKJ0 227 aa13.16□□□□□ -0.3
FNDC1-201ENST00000297267 CD99P14209 185 aa13.16□□□□□ -0.3
FNDC1-201ENST00000297267 C11orf44Q8N8P7 122 aa13.16□□□□□ -0.3
FNDC1-201ENST00000297267 NPIPB3Q92617 1050 aa13.16□□□□□ -0.3
FNDC1-201ENST00000297267 SCN5AQ14524 2016 aa13.16□□□□□ -0.3
FNDC1-201ENST00000297267 PRR19A6NJB7 356 aa13.16□□□□□ -0.3
FNDC1-201ENST00000297267 MAS1LP35410 378 aa13.16□□□□□ -0.3
FNDC1-201ENST00000297267 PPIAL4CA0A0B4J2A2 164 aa13.15□□□□□ -0.3
FNDC1-201ENST00000297267 hCG_38984A0A1B0GV85 526 aa13.15□□□□□ -0.3
FNDC1-201ENST00000297267 PPIAL4GP0DN37 164 aa13.15□□□□□ -0.3
FNDC1-201ENST00000297267 FAM53AQ6NSI3 398 aaPredicted RBP13.15□□□□□ -0.3
FNDC1-201ENST00000297267 SEC11BP0C7V7 166 aa13.15□□□□□ -0.3
FNDC1-201ENST00000297267 HERVK_113P61574 105 aa13.15□□□□□ -0.3
FNDC1-201ENST00000297267 DRAM1Q8N682 238 aa13.15□□□□□ -0.3
FNDC1-201ENST00000297267 DPH3Q96FX2 82 aa13.15□□□□□ -0.3
FNDC1-201ENST00000297267 RELQ04864 619 aaPredicted RBP13.15□□□□□ -0.3
FNDC1-201ENST00000297267 OR10J6PQ8NGY7 276 aa13.15□□□□□ -0.3
FNDC1-201ENST00000297267 SAP25Q8TEE9 199 aa13.15□□□□□ -0.3
FNDC1-201ENST00000297267 ATP5G3P48201 142 aa13.15□□□□□ -0.3
FNDC1-201ENST00000297267 PCOLCEQ15113 449 aa13.15□□□□□ -0.3
FNDC1-201ENST00000297267 DUX5Q96PT3 197 aa13.15□□□□□ -0.3
FNDC1-201ENST00000297267 THSD7AQ9UPZ6 1657 aa13.15□□□□□ -0.3
FNDC1-201ENST00000297267 FAM181BA6NEQ2 426 aa13.15□□□□□ -0.31
FNDC1-201ENST00000297267 RPL8P62917 257 aaKnown RBP13.15□□□□□ -0.31
FNDC1-201ENST00000297267 CLPPQ16740 277 aaPredicted RBP13.15□□□□□ -0.31
FNDC1-201ENST00000297267 CARFQ8N187 725 aa13.15□□□□□ -0.31
FNDC1-201ENST00000297267 LSM10Q969L4 123 aaKnown RBP13.15□□□□□ -0.31
FNDC1-201ENST00000297267 COL4A6Q14031 1691 aa13.14□□□□□ -0.31
FNDC1-201ENST00000297267 AREGP15514 252 aa13.14□□□□□ -0.31
FNDC1-201ENST00000297267 IGFBP2P18065 325 aa13.14□□□□□ -0.31
FNDC1-201ENST00000297267 STPG3Q8N7X2 389 aa13.14□□□□□ -0.31
FNDC1-201ENST00000297267 HEXA-AS1Q9H8Q6 139 aa13.14□□□□□ -0.31
FNDC1-201ENST00000297267 TUBD1Q9UJT1 453 aa13.14□□□□□ -0.31
FNDC1-201ENST00000297267 TMEM262E9PQX1 116 aa13.14□□□□□ -0.31
FNDC1-201ENST00000297267 ANOS1P23352 680 aa13.14□□□□□ -0.31
FNDC1-201ENST00000297267 C10orf35Q96D05 121 aa13.14□□□□□ -0.31
FNDC1-201ENST00000297267 KCNMB1Q16558 191 aa13.14□□□□□ -0.31
FNDC1-201ENST00000297267 TRBV5-7A0A0A0MS05 114 aa13.14□□□□□ -0.31
FNDC1-201ENST00000297267 DLL1O00548 723 aa13.14□□□□□ -0.31
FNDC1-201ENST00000297267 COTL1Q14019 142 aa13.14□□□□□ -0.31
FNDC1-201ENST00000297267 ZNF345Q14585 488 aa13.14□□□□□ -0.31
FNDC1-201ENST00000297267 ZNF56Q15929 161 aa13.14□□□□□ -0.31
FNDC1-201ENST00000297267 TMEM78Q5T7P6 136 aa13.14□□□□□ -0.31
FNDC1-201ENST00000297267 CALHM1Q8IU99 346 aa13.14□□□□□ -0.31
FNDC1-201ENST00000297267 ZCCHC14Q8WYQ9 949 aaKnown RBP13.14□□□□□ -0.31
FNDC1-201ENST00000297267 SIPA1L1O43166 1804 aa13.14□□□□□ -0.31
FNDC1-201ENST00000297267 TMEM127O75204 238 aa13.14□□□□□ -0.31
FNDC1-201ENST00000297267 LRRC75BQ2VPJ9 315 aa13.14□□□□□ -0.31
FNDC1-201ENST00000297267 H1FOOQ8IZA3 346 aaPredicted RBP13.14□□□□□ -0.31
FNDC1-201ENST00000297267 OR4C13Q8NGP0 309 aa13.14□□□□□ -0.31
FNDC1-201ENST00000297267 SP9P0CG40 484 aa13.13□□□□□ -0.31
FNDC1-201ENST00000297267 ZNF273Q14593 569 aa13.13□□□□□ -0.31
FNDC1-201ENST00000297267 RRN3P1Q2M238 152 aa13.13□□□□□ -0.31
FNDC1-201ENST00000297267 ZNF600Q6ZNG1 722 aa13.13□□□□□ -0.31
FNDC1-201ENST00000297267 CCL19Q99731 98 aa13.13□□□□□ -0.31
FNDC1-201ENST00000297267 WDR54Q9H977 334 aa13.13□□□□□ -0.31
FNDC1-201ENST00000297267 FOXA2Q9Y261 457 aaPredicted RBP13.13□□□□□ -0.31
FNDC1-201ENST00000297267 CDS2O95674 445 aa13.13□□□□□ -0.31
FNDC1-201ENST00000297267 LINC01590Q5TEZ4 76 aa13.13□□□□□ -0.31
FNDC1-201ENST00000297267 SFRP2Q96HF1 295 aa13.13□□□□□ -0.31
FNDC1-201ENST00000297267 RAXQ9Y2V3 346 aa13.13□□□□□ -0.31
FNDC1-201ENST00000297267 LSM4Q9Y4Z0 139 aaKnown RBP13.13□□□□□ -0.31
FNDC1-201ENST00000297267 SNRNP200O75643 2136 aaKnown RBP13.13□□□□□ -0.31
FNDC1-201ENST00000297267 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.13□□□□□ -0.31
FNDC1-201ENST00000297267 C17orf98A8MV24 154 aa13.13□□□□□ -0.31
FNDC1-201ENST00000297267 CTAG1AP78358 180 aa13.13□□□□□ -0.31
FNDC1-201ENST00000297267 OR51M1Q9H341 326 aa13.13□□□□□ -0.31
FNDC1-201ENST00000297267 ERGP11308 486 aa13.13□□□□□ -0.31
FNDC1-201ENST00000297267 ZFP30Q9Y2G7 519 aa13.13□□□□□ -0.31
FNDC1-201ENST00000297267 PHLDA3Q9Y5J5 127 aa13.13□□□□□ -0.31
FNDC1-201ENST00000297267 ODAMA1E959 279 aa13.12□□□□□ -0.31
FNDC1-201ENST00000297267 NDUFA3O95167 84 aa13.12□□□□□ -0.31
FNDC1-201ENST00000297267 ISG15P05161 165 aa13.12□□□□□ -0.31
FNDC1-201ENST00000297267 ADIPOQQ15848 244 aa13.12□□□□□ -0.31
FNDC1-201ENST00000297267 TMEM171Q8WVE6 324 aa13.12□□□□□ -0.31
FNDC1-201ENST00000297267 CENPWQ5EE01 88 aa13.12□□□□□ -0.31
FNDC1-201ENST00000297267 LINC00596Q86U02 117 aa13.12□□□□□ -0.31
FNDC1-201ENST00000297267 SSBP4Q9BWG4 385 aaPredicted RBP13.12□□□□□ -0.31
FNDC1-201ENST00000297267 AGAP20933 346 aa13.12□□□□□ -0.31
FNDC1-201ENST00000297267 MS4A5Q9H3V2 200 aa13.12□□□□□ -0.31
FNDC1-201ENST00000297267 LCTP09848 1927 aa13.12□□□□□ -0.31
FNDC1-201ENST00000297267 SMIM6P0DI80 62 aa13.12□□□□□ -0.31
FNDC1-201ENST00000297267 PPIFP30405 207 aaKnown RBP13.12□□□□□ -0.31
FNDC1-201ENST00000297267 FAM216BQ8N7L0 139 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms