RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 ITLN1Q8WWA0 313 aa8.33□□□□□ -1.08
USP11-201ENST00000218348 COQ2Q96H96 371 aa8.33□□□□□ -1.08
USP11-201ENST00000218348 ANKHD1Q8IWZ3 2542 aaKnown RBP8.33□□□□□ -1.08
USP11-201ENST00000218348 CSMD1Q96PZ7 3565 aa8.33□□□□□ -1.08
USP11-201ENST00000218348 CDS2O95674 445 aa8.33□□□□□ -1.08
USP11-201ENST00000218348 PF4V1P10720 104 aa8.33□□□□□ -1.08
USP11-201ENST00000218348 S100GP29377 79 aa8.33□□□□□ -1.08
USP11-201ENST00000218348 G6PCP35575 357 aa8.33□□□□□ -1.08
USP11-201ENST00000218348 CCL8P80075 99 aa8.33□□□□□ -1.08
USP11-201ENST00000218348 MIDNQ504T8 468 aa8.33□□□□□ -1.08
USP11-201ENST00000218348 ACP7Q6ZNF0 438 aa8.33□□□□□ -1.08
USP11-201ENST00000218348 CD177Q8N6Q3 437 aa8.33□□□□□ -1.08
USP11-201ENST00000218348 TMEM171Q8WVE6 324 aa8.33□□□□□ -1.08
USP11-201ENST00000218348 CORO2AQ92828 525 aa8.33□□□□□ -1.08
USP11-201ENST00000218348 NINJ1Q92982 152 aa8.33□□□□□ -1.08
USP11-201ENST00000218348 GALMQ96C23 342 aa8.33□□□□□ -1.08
USP11-201ENST00000218348 SNRNP40Q96DI7 357 aaKnown RBP8.33□□□□□ -1.08
USP11-201ENST00000218348 FBXO7Q9Y3I1 522 aa8.33□□□□□ -1.08
USP11-201ENST00000218348 TENM4Q6N022 2769 aa8.33□□□□□ -1.08
USP11-201ENST00000218348 CYB5BO43169 146 aa8.32□□□□□ -1.08
USP11-201ENST00000218348 HIST1H2BKO60814 126 aa8.32□□□□□ -1.08
USP11-201ENST00000218348 JTBO76095 146 aa8.32□□□□□ -1.08
USP11-201ENST00000218348 IGKV1-39P01597 117 aa8.32□□□□□ -1.08
USP11-201ENST00000218348 IGKV1D-39P04432 117 aa8.32□□□□□ -1.08
USP11-201ENST00000218348 HIST1H2BJP06899 126 aa8.32□□□□□ -1.08
USP11-201ENST00000218348 LYL1P12980 280 aa8.32□□□□□ -1.08
USP11-201ENST00000218348 HIST1H2BOP23527 126 aa8.32□□□□□ -1.08
USP11-201ENST00000218348 HIST1H2BBP33778 126 aa8.32□□□□□ -1.08
USP11-201ENST00000218348 HIST1H2BDP58876 126 aa8.32□□□□□ -1.08
USP11-201ENST00000218348 HIST1H2BCP62807 126 aa8.32□□□□□ -1.08
USP11-201ENST00000218348 HIST2H2BEQ16778 126 aa8.32□□□□□ -1.08
USP11-201ENST00000218348 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.32□□□□□ -1.08
USP11-201ENST00000218348 LDLRAD2Q5SZI1 272 aa8.32□□□□□ -1.08
USP11-201ENST00000218348 ERASQ7Z444 233 aa8.32□□□□□ -1.08
USP11-201ENST00000218348 OR4D5Q8NGN0 318 aa8.32□□□□□ -1.08
USP11-201ENST00000218348 HIST1H2BHQ93079 126 aa8.32□□□□□ -1.08
USP11-201ENST00000218348 HIST1H2BNQ99877 126 aa8.32□□□□□ -1.08
USP11-201ENST00000218348 HIST1H2BMQ99879 126 aa8.32□□□□□ -1.08
USP11-201ENST00000218348 EIF5A2Q9GZV4 153 aaKnown RBP8.32□□□□□ -1.08
USP11-201ENST00000218348 ZNF835Q9Y2P0 537 aa8.32□□□□□ -1.08
USP11-201ENST00000218348 BORCS7-ASMTA0A0B4J1R7 106 aa8.32□□□□□ -1.08
USP11-201ENST00000218348 TMEM30CPA0ZSE6 113 aa8.32□□□□□ -1.08
USP11-201ENST00000218348 GPR137BO60478 399 aa8.32□□□□□ -1.08
USP11-201ENST00000218348 TSPAN15O95858 294 aa8.32□□□□□ -1.08
USP11-201ENST00000218348 VDAC1P21796 283 aa8.32□□□□□ -1.08
USP11-201ENST00000218348 CHRNB4P30926 498 aa8.32□□□□□ -1.08
USP11-201ENST00000218348 RAB7AP51149 207 aa8.32□□□□□ -1.08
USP11-201ENST00000218348 PRRX1P54821 245 aa8.32□□□□□ -1.08
USP11-201ENST00000218348 RPL30P62888 115 aaKnown RBP8.32□□□□□ -1.08
USP11-201ENST00000218348 SPANXN5Q5MJ07 72 aa8.32□□□□□ -1.08
USP11-201ENST00000218348 GFRALQ6UXV0 394 aa8.32□□□□□ -1.08
USP11-201ENST00000218348 TMEM252Q8N6L7 170 aa8.32□□□□□ -1.08
USP11-201ENST00000218348 HIST1H2BLQ99880 126 aa8.32□□□□□ -1.08
USP11-201ENST00000218348 GNG12Q9UBI6 72 aa8.32□□□□□ -1.08
USP11-201ENST00000218348 POMT1Q9Y6A1 747 aa8.32□□□□□ -1.08
USP11-201ENST00000218348 DSCAMO60469 2012 aa8.32□□□□□ -1.08
USP11-201ENST00000218348 TNCP24821 2201 aa8.32□□□□□ -1.08
USP11-201ENST00000218348 IGLV2-14P01704 120 aa8.32□□□□□ -1.08
USP11-201ENST00000218348 UCP1P25874 307 aa8.32□□□□□ -1.08
USP11-201ENST00000218348 PRDX2P32119 198 aa8.32□□□□□ -1.08
USP11-201ENST00000218348 PLEKHA2Q9HB19 425 aa8.32□□□□□ -1.08
USP11-201ENST00000218348 FGF16O43320 207 aa8.31□□□□□ -1.08
USP11-201ENST00000218348 SCGB2A2Q13296 93 aa8.31□□□□□ -1.08
USP11-201ENST00000218348 ZNF146Q15072 292 aa8.31□□□□□ -1.08
USP11-201ENST00000218348 P2RY6Q15077 328 aa8.31□□□□□ -1.08
USP11-201ENST00000218348 Q8IYB0 196 aa8.31□□□□□ -1.08
USP11-201ENST00000218348 VKORC1L1Q8N0U8 176 aa8.31□□□□□ -1.08
USP11-201ENST00000218348 OR2G3Q8NGZ4 309 aa8.31□□□□□ -1.08
USP11-201ENST00000218348 OR5R1Q8NH85 324 aa8.31□□□□□ -1.08
USP11-201ENST00000218348 LOC105371242A0A075B767 164 aa8.31□□□□□ -1.08
USP11-201ENST00000218348 MBD3L4A6NDZ8 208 aaPredicted RBP8.31□□□□□ -1.08
USP11-201ENST00000218348 MBD3L3A6NE82 208 aaPredicted RBP8.31□□□□□ -1.08
USP11-201ENST00000218348 MBD3L5A6NJ08 208 aaPredicted RBP8.31□□□□□ -1.08
USP11-201ENST00000218348 RNASEK-C17orf49H0YIS7 233 aa8.31□□□□□ -1.08
USP11-201ENST00000218348 IFNL4K9M1U5 179 aa8.31□□□□□ -1.08
USP11-201ENST00000218348 IGKV1-5P01602 117 aa8.31□□□□□ -1.08
USP11-201ENST00000218348 KLF3P57682 345 aaPredicted RBP8.31□□□□□ -1.08
USP11-201ENST00000218348 NMSQ5H8A3 153 aa8.31□□□□□ -1.08
USP11-201ENST00000218348 EIF5AL1Q6IS14 154 aaKnown RBP8.31□□□□□ -1.08
USP11-201ENST00000218348 ZNF343Q6P1L6 599 aa8.31□□□□□ -1.08
USP11-201ENST00000218348 DOLPP1Q86YN1 238 aa8.31□□□□□ -1.08
USP11-201ENST00000218348 MBD3L2Q8NHZ7 208 aaPredicted RBP8.31□□□□□ -1.08
USP11-201ENST00000218348 TMEM56Q96MV1 263 aa8.31□□□□□ -1.08
USP11-201ENST00000218348 TMEM56-RWDD3S4R434 201 aa8.31□□□□□ -1.08
USP11-201ENST00000218348 WNK2Q9Y3S1 2297 aa8.31□□□□□ -1.08
USP11-201ENST00000218348 TRGC2P03986 189 aa8.31□□□□□ -1.08
USP11-201ENST00000218348 ATP6V0CP27449 155 aa8.31□□□□□ -1.08
USP11-201ENST00000218348 SULT1A1P50225 295 aa8.31□□□□□ -1.08
USP11-201ENST00000218348 LRTM2Q8N967 370 aa8.31□□□□□ -1.08
USP11-201ENST00000218348 SPIN2AQ99865 258 aa8.31□□□□□ -1.08
USP11-201ENST00000218348 SPIN2BQ9BPZ2 258 aa8.31□□□□□ -1.08
USP11-201ENST00000218348 ZNRD1Q9P1U0 126 aa8.31□□□□□ -1.08
USP11-201ENST00000218348 ZFP30Q9Y2G7 519 aa8.31□□□□□ -1.08
USP11-201ENST00000218348 A0A0G2JNJ9 132 aa8.3□□□□□ -1.08
USP11-201ENST00000218348 C17orf98A8MV24 154 aa8.3□□□□□ -1.08
USP11-201ENST00000218348 H0Y980 276 aa8.3□□□□□ -1.08
USP11-201ENST00000218348 PRRG2O14669 202 aa8.3□□□□□ -1.08
USP11-201ENST00000218348 HMGB3O15347 200 aaKnown RBP8.3□□□□□ -1.08
USP11-201ENST00000218348 PPBPP02775 128 aa8.3□□□□□ -1.08
USP11-201ENST00000218348 OR13C7P0DN81 318 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms