RNA–Protein interactions for RNA: YPR002W

PDH1, Transcript of Putative 2-methylcitrate dehydratase, yeastyeast

Gene PDH1, Length 1,551 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDH1YPR002W SPO16P17122 198 aa5.73□□□□□ -1.49
PDH1YPR002W TPS2P31688 896 aaKnown RBP5.73□□□□□ -1.49
PDH1YPR002W DBF4P32325 704 aa5.73□□□□□ -1.49
PDH1YPR002W PGM1P33401 570 aaKnown RBP5.73□□□□□ -1.49
PDH1YPR002W UBP11P36026 717 aa5.73□□□□□ -1.49
PDH1YPR002W CST26P38226 397 aa5.73□□□□□ -1.49
PDH1YPR002W YTA12P40341 825 aa5.73□□□□□ -1.49
PDH1YPR002W UBP6P43593 499 aaKnown RBP5.73□□□□□ -1.49
PDH1YPR002W RPS0BP46654 252 aaKnown RBP5.73□□□□□ -1.49
PDH1YPR002W ARI1P53111 347 aaKnown RBP5.73□□□□□ -1.49
PDH1YPR002W HUL5P53119 910 aa5.73□□□□□ -1.49
PDH1YPR002W ERP6P53198 216 aa5.73□□□□□ -1.49
PDH1YPR002W YGR111WP53265 400 aa5.73□□□□□ -1.49
PDH1YPR002W ALD6P54115 500 aaKnown RBP5.73□□□□□ -1.49
PDH1YPR002W SPO19Q03029 223 aa5.73□□□□□ -1.49
PDH1YPR002W PUF3Q07807 879 aaKnown RBP RIP-Chip data5.73□□□□□ -1.49not detected
PDH1YPR002W MOT1P32333 1867 aa5.73□□□□□ -1.49
PDH1YPR002W RAD10P06838 210 aa5.72□□□□□ -1.49
PDH1YPR002W SWI6P09959 803 aa5.72□□□□□ -1.49
PDH1YPR002W PWP1P21304 576 aaKnown RBP5.72□□□□□ -1.49
PDH1YPR002W PWP2P25635 923 aaKnown RBP5.72□□□□□ -1.49
PDH1YPR002W DPH5P32469 300 aaPredicted RBP5.72□□□□□ -1.49
PDH1YPR002W EFB1P32471 206 aaKnown RBP5.72□□□□□ -1.49
PDH1YPR002W YSC83P32792 385 aa5.72□□□□□ -1.49
PDH1YPR002W RFC3P38629 340 aa5.72□□□□□ -1.49
PDH1YPR002W PMC1P38929 1173 aaPredicted RBP5.72□□□□□ -1.49
PDH1YPR002W YMR134WP40207 237 aa5.72□□□□□ -1.49
PDH1YPR002W YNL144CP53907 740 aa5.72□□□□□ -1.49
PDH1YPR002W YMR074CQ04773 145 aa5.72□□□□□ -1.49
PDH1YPR002W EMG1Q06287 252 aaKnown RBP5.72□□□□□ -1.49
PDH1YPR002W CDC53Q12018 815 aaKnown RBP5.72□□□□□ -1.49
PDH1YPR002W OCA6Q12454 224 aa5.72□□□□□ -1.49
PDH1YPR002W YPT6Q99260 215 aa5.72□□□□□ -1.49
PDH1YPR002W ADE3P07245 946 aaKnown RBP5.72□□□□□ -1.49
PDH1YPR002W REC107P21651 314 aa5.72□□□□□ -1.49
PDH1YPR002W FPS1P23900 669 aa5.72□□□□□ -1.49
PDH1YPR002W SPS22P25380 463 aa5.72□□□□□ -1.49
PDH1YPR002W RAD51P25454 400 aa5.72□□□□□ -1.49
PDH1YPR002W TFC3P34111 1160 aa5.72□□□□□ -1.49
PDH1YPR002W PAM1P37304 830 aaKnown RBP5.72□□□□□ -1.49
PDH1YPR002W ERT1P38140 529 aa5.72□□□□□ -1.49
PDH1YPR002W SPC97P38863 823 aa5.72□□□□□ -1.49
PDH1YPR002W PFK26P40433 827 aaKnown RBP5.72□□□□□ -1.49
PDH1YPR002W YIL165CP40446 119 aa5.72□□□□□ -1.49
PDH1YPR002W FIS1P40515 155 aa5.72□□□□□ -1.49
PDH1YPR002W DAS1P47005 663 aa5.72□□□□□ -1.49
PDH1YPR002W TAF6P53040 516 aa5.72□□□□□ -1.49
PDH1YPR002W YNR040WP53736 256 aa5.72□□□□□ -1.49
PDH1YPR002W HEH2Q03281 663 aa5.72□□□□□ -1.49
PDH1YPR002W PPM1Q04081 328 aa5.72□□□□□ -1.49
PDH1YPR002W YMR027WQ04371 470 aa5.72□□□□□ -1.49
PDH1YPR002W UFO1Q04511 668 aa5.72□□□□□ -1.49
PDH1YPR002W NOC3Q07896 663 aaPredicted RBP5.72□□□□□ -1.49
PDH1YPR002W MDM38Q08179 573 aa5.72□□□□□ -1.49
PDH1YPR002W SLX4Q12098 748 aa5.72□□□□□ -1.49
PDH1YPR002W GRX6Q12438 231 aa5.72□□□□□ -1.49
PDH1YPR002W CCP1P00431 361 aa5.71□□□□□ -1.5
PDH1YPR002W RPS3P05750 240 aaKnown RBP5.71□□□□□ -1.5
PDH1YPR002W SNA3P14359 133 aa5.71□□□□□ -1.5
PDH1YPR002W ADP1P25371 1049 aa5.71□□□□□ -1.5
PDH1YPR002W RPL5P26321 297 aaKnown RBP5.71□□□□□ -1.5
PDH1YPR002W SIN4P32259 974 aa5.71□□□□□ -1.5
PDH1YPR002W CBF5P33322 483 aaKnown RBP RIP-Chip data5.71□□□□□ -1.5not detected
PDH1YPR002W DUG2P38149 878 aa5.71□□□□□ -1.5
PDH1YPR002W UBP13P38187 747 aa5.71□□□□□ -1.5
PDH1YPR002W LIN1P38852 340 aaPredicted RBP5.71□□□□□ -1.5
PDH1YPR002W OAF1P39720 1047 aaPredicted RBP5.71□□□□□ -1.5
PDH1YPR002W GVP36P40531 326 aaKnown RBP5.71□□□□□ -1.5
PDH1YPR002W PHO86P46956 311 aa5.71□□□□□ -1.5
PDH1YPR002W RSM26P47141 266 aa5.71□□□□□ -1.5
PDH1YPR002W MTC3P53077 123 aa5.71□□□□□ -1.5
PDH1YPR002W PUS2P53167 370 aa5.71□□□□□ -1.5
PDH1YPR002W LSC1P53598 329 aaKnown RBP5.71□□□□□ -1.5
PDH1YPR002W BET4Q00618 327 aa5.71□□□□□ -1.5
PDH1YPR002W ATP25Q03153 612 aa5.71□□□□□ -1.5
PDH1YPR002W FMN1Q03778 218 aa5.71□□□□□ -1.5
PDH1YPR002W GTB1Q04924 702 aa5.71□□□□□ -1.5
PDH1YPR002W PHM6Q05637 104 aa5.71□□□□□ -1.5
PDH1YPR002W MEU1Q07938 337 aaKnown RBP RIP-Chip data5.71□□□□□ -1.5not detected
PDH1YPR002W LAP2Q10740 671 aa5.71□□□□□ -1.5
PDH1YPR002W RRD2Q12461 358 aa5.71□□□□□ -1.5
PDH1YPR002W LAA1P39526 2014 aa5.7□□□□□ -1.5
PDH1YPR002W TUB2P02557 457 aaKnown RBP5.7□□□□□ -1.5
PDH1YPR002W TCP1P12612 559 aaKnown RBP5.7□□□□□ -1.5
PDH1YPR002W PMS1P14242 873 aa5.7□□□□□ -1.5
PDH1YPR002W EST1P17214 699 aaPredicted RBP5.7□□□□□ -1.5
PDH1YPR002W CDC42P19073 191 aa5.7□□□□□ -1.5
PDH1YPR002W AEP2P22136 580 aa5.7□□□□□ -1.5
PDH1YPR002W MRPL25P23369 157 aa5.7□□□□□ -1.5
PDH1YPR002W DAL2P25335 343 aa5.7□□□□□ -1.5
PDH1YPR002W RPT1P33299 467 aaKnown RBP5.7□□□□□ -1.5
PDH1YPR002W YBL028CP38202 106 aa5.7□□□□□ -1.5
PDH1YPR002W POP4P38336 279 aa5.7□□□□□ -1.5
PDH1YPR002W RPN3P40016 523 aaKnown RBP5.7□□□□□ -1.5
PDH1YPR002W ALG5P40350 334 aa5.7□□□□□ -1.5
PDH1YPR002W CTR1P49573 406 aa5.7□□□□□ -1.5
PDH1YPR002W TAM41P53230 385 aa5.7□□□□□ -1.5
PDH1YPR002W CNM67P53865 581 aaKnown RBP5.7□□□□□ -1.5
PDH1YPR002W NOP15P53927 220 aaPredicted RBP5.7□□□□□ -1.5
PDH1YPR002W OSH6Q02201 448 aa5.7□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 131.4 ms