RNA–Protein interactions for RNA: YPL260W

YPL260W, Transcript of Putative substrate of cAMP-dependent protein kinase (PKA), yeast

Gene YPL260W, Length 1,656 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPL260W	YPL260W	EAF1	Q06337	982 aa		4.58	□□□□□ -1.68
YPL260W	YPL260W	MLC2	Q06580	163 aa		4.58	□□□□□ -1.68
YPL260W	YPL260W	ADY3	Q07732	790 aa		4.58	□□□□□ -1.68
YPL260W	YPL260W	PUS7	Q08647	676 aa	Known RBP	4.58	□□□□□ -1.68
YPL260W	YPL260W	DAS2	Q12084	232 aa		4.58	□□□□□ -1.68
YPL260W	YPL260W	RTR2	Q12378	196 aa		4.58	□□□□□ -1.68
YPL260W	YPL260W	BUD3	P25558	1636 aa		4.58	□□□□□ -1.68
YPL260W	YPL260W	SEC7	P11075	2009 aa	Known RBP	4.58	□□□□□ -1.68
YPL260W	YPL260W	RPL24A	P04449	155 aa	Known RBP	4.57	□□□□□ -1.68
YPL260W	YPL260W	YAK1	P14680	807 aa		4.57	□□□□□ -1.68
YPL260W	YPL260W	RPS5	P26783	225 aa	Known RBP	4.57	□□□□□ -1.68
YPL260W	YPL260W	SUV3	P32580	737 aa		4.57	□□□□□ -1.68
YPL260W	YPL260W	TEF4	P36008	412 aa	Known RBP	4.57	□□□□□ -1.68
YPL260W	YPL260W	NAT2	P37293	288 aa		4.57	□□□□□ -1.68
YPL260W	YPL260W	PES4	P39684	611 aa		4.57	□□□□□ -1.68
YPL260W	YPL260W	YJL070C	P40361	888 aa		4.57	□□□□□ -1.68
YPL260W	YPL260W	BNA3	P47039	444 aa	Known RBP	4.57	□□□□□ -1.68
YPL260W	YPL260W	RAD17	P48581	401 aa		4.57	□□□□□ -1.68
YPL260W	YPL260W	LGE1	Q02796	332 aa	Known RBP	4.57	□□□□□ -1.68
YPL260W	YPL260W	NOG1	Q02892	647 aa	Known RBP	4.57	□□□□□ -1.68
YPL260W	YPL260W	SRT1	Q03175	343 aa		4.57	□□□□□ -1.68
YPL260W	YPL260W	RAD30	Q04049	632 aa		4.57	□□□□□ -1.68
YPL260W	YPL260W	VIP1	Q06685	1146 aa	Known RBP	4.57	□□□□□ -1.68
YPL260W	YPL260W	HUA2	Q12134	243 aa		4.57	□□□□□ -1.68
YPL260W	YPL260W	TUB3	P09734	445 aa	Known RBP	4.57	□□□□□ -1.68
YPL260W	YPL260W	MATALPHA2	P0CY08	210 aa		4.57	□□□□□ -1.68
YPL260W	YPL260W	HMLALPHA2	P0CY09	210 aa		4.57	□□□□□ -1.68
YPL260W	YPL260W	MSD1	P15179	658 aa	Known RBP	4.57	□□□□□ -1.68
YPL260W	YPL260W	SRV2	P17555	526 aa	Known RBP	4.57	□□□□□ -1.68
YPL260W	YPL260W	DBP3	P20447	523 aa	Known RBP	4.57	□□□□□ -1.68
YPL260W	YPL260W	LCB1	P25045	558 aa	Known RBP	4.57	□□□□□ -1.68
YPL260W	YPL260W	CPR3	P25719	182 aa		4.57	□□□□□ -1.68
YPL260W	YPL260W	SEC65	P29478	273 aa		4.57	□□□□□ -1.68
YPL260W	YPL260W	ACH1	P32316	526 aa		4.57	□□□□□ -1.68
YPL260W	YPL260W	FRD1	P32614	470 aa	Known RBP	4.57	□□□□□ -1.68
YPL260W	YPL260W	GRX4	P32642	244 aa		4.57	□□□□□ -1.68
YPL260W	YPL260W	MYO3	P36006	1272 aa		4.57	□□□□□ -1.68
YPL260W	YPL260W	MAL31	P38156	614 aa		4.57	□□□□□ -1.68
YPL260W	YPL260W	RFS1	P38234	210 aa	Known RBP	4.57	□□□□□ -1.68
YPL260W	YPL260W	DSS1	P39112	969 aa		4.57	□□□□□ -1.68
YPL260W	YPL260W	DIM1	P41819	318 aa	Known RBP	4.57	□□□□□ -1.68
YPL260W	YPL260W	ROK1	P45818	564 aa	Predicted RBP	4.57	□□□□□ -1.68
YPL260W	YPL260W	TIM54	P47045	478 aa		4.57	□□□□□ -1.68
YPL260W	YPL260W	LSM8	P47093	109 aa	Known RBP	4.57	□□□□□ -1.68
YPL260W	YPL260W	YNL040W	P53960	456 aa	Predicted RBP	4.57	□□□□□ -1.68
YPL260W	YPL260W	FDC1	Q03034	503 aa		4.57	□□□□□ -1.68
YPL260W	YPL260W	CLU1	Q03690	1277 aa	Known RBP	4.57	□□□□□ -1.68
YPL260W	YPL260W	YLR407W	Q06070	228 aa		4.57	□□□□□ -1.68
YPL260W	YPL260W	YDL121C	Q07541	149 aa		4.57	□□□□□ -1.68
YPL260W	YPL260W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
YPL260W	YPL260W	TRE1	Q08919	783 aa		4.57	□□□□□ -1.68
YPL260W	YPL260W	MNL2	Q12205	849 aa		4.57	□□□□□ -1.68
YPL260W	YPL260W	YOR111W	Q99210	232 aa		4.57	□□□□□ -1.68
YPL260W	YPL260W	ALG1	P16661	449 aa		4.56	□□□□□ -1.68
YPL260W	YPL260W	CKA2	P19454	339 aa		4.56	□□□□□ -1.68
YPL260W	YPL260W	MRPL8	P22353	238 aa		4.56	□□□□□ -1.68
YPL260W	YPL260W	PAT1	P25644	796 aa	Known RBP	4.56	□□□□□ -1.68
YPL260W	YPL260W	ICL1	P28240	557 aa	Predicted RBP	4.56	□□□□□ -1.68
YPL260W	YPL260W	RPT5	P33297	434 aa	Known RBP	4.56	□□□□□ -1.68
YPL260W	YPL260W	UBP11	P36026	717 aa		4.56	□□□□□ -1.68
YPL260W	YPL260W	SPC42	P36094	363 aa		4.56	□□□□□ -1.68
YPL260W	YPL260W	ETR1	P38071	380 aa		4.56	□□□□□ -1.68
YPL260W	YPL260W	ECM31	P38122	312 aa		4.56	□□□□□ -1.68
YPL260W	YPL260W	KTR4	P38131	464 aa		4.56	□□□□□ -1.68
YPL260W	YPL260W	PTC2	P39966	464 aa	Known RBP	4.56	□□□□□ -1.68
YPL260W	YPL260W	EMP65	P40085	556 aa		4.56	□□□□□ -1.68
YPL260W	YPL260W	DDI1	P40087	428 aa		4.56	□□□□□ -1.68
YPL260W	YPL260W	ELP2	P42935	788 aa		4.56	□□□□□ -1.68
YPL260W	YPL260W	IRC5	P43610	853 aa		4.56	□□□□□ -1.68
YPL260W	YPL260W	RIM21	P48565	533 aa		4.56	□□□□□ -1.68
YPL260W	YPL260W	MAL11	P53048	616 aa		4.56	□□□□□ -1.68
YPL260W	YPL260W	YGL108C	P53139	140 aa		4.56	□□□□□ -1.68
YPL260W	YPL260W	CGR1	P53188	120 aa		4.56	□□□□□ -1.68
YPL260W	YPL260W	YNL115C	P53925	644 aa		4.56	□□□□□ -1.68
YPL260W	YPL260W	ORC3	P54790	616 aa		4.56	□□□□□ -1.68
YPL260W	YPL260W	YPL034W	Q03083	165 aa		4.56	□□□□□ -1.68
YPL260W	YPL260W	HER2	Q03557	464 aa		4.56	□□□□□ -1.68
YPL260W	YPL260W	ARP9	Q05123	467 aa		4.56	□□□□□ -1.68
YPL260W	YPL260W	YCS4	Q06156	1176 aa		4.56	□□□□□ -1.68
YPL260W	YPL260W	FRA1	Q07825	749 aa		4.56	□□□□□ -1.68
YPL260W	YPL260W	MAM3	Q12296	706 aa		4.56	□□□□□ -1.68
YPL260W	YPL260W	HMG2	P12684	1045 aa		4.55	□□□□□ -1.68
YPL260W	YPL260W	STE12	P13574	688 aa		4.55	□□□□□ -1.68
YPL260W	YPL260W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
YPL260W	YPL260W	RDS2	P19541	446 aa	Known RBP	4.55	□□□□□ -1.68
YPL260W	YPL260W	HXT2	P23585	541 aa		4.55	□□□□□ -1.68
YPL260W	YPL260W	RVS161	P25343	265 aa	Known RBP	4.55	□□□□□ -1.68
YPL260W	YPL260W	GYP6	P32806	458 aa		4.55	□□□□□ -1.68
YPL260W	YPL260W	YKR078W	P36158	585 aa	Known RBP	4.55	□□□□□ -1.68
YPL260W	YPL260W	SHM1	P37292	490 aa	Predicted RBP	4.55	□□□□□ -1.68
YPL260W	YPL260W	BAP2	P38084	609 aa		4.55	□□□□□ -1.68
YPL260W	YPL260W	RDH54	P38086	958 aa		4.55	□□□□□ -1.68
YPL260W	YPL260W	POP7	P38291	140 aa		4.55	□□□□□ -1.68
YPL260W	YPL260W	GOS1	P38736	223 aa		4.55	□□□□□ -1.68
YPL260W	YPL260W	CTM1	P38818	585 aa		4.55	□□□□□ -1.68
YPL260W	YPL260W	MSS4	P38994	779 aa		4.55	□□□□□ -1.68
YPL260W	YPL260W	SEN34	P39707	275 aa		4.55	□□□□□ -1.68
YPL260W	YPL260W	FMP32	P43557	207 aa		4.55	□□□□□ -1.68
YPL260W	YPL260W	MDE1	P47095	244 aa		4.55	□□□□□ -1.68
YPL260W	YPL260W	RSM26	P47141	266 aa		4.55	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 56.8 ms