RNA–Protein interactions for RNA: YPL016W

SWI1, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SWI1, Length 3,945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI1YPL016W PHO81P17442 1178 aa3.87□□□□□ -1.79
SWI1YPL016W TEF4P36008 412 aaKnown RBP3.87□□□□□ -1.79
SWI1YPL016W COS111P38308 924 aa3.87□□□□□ -1.79
SWI1YPL016W PPX1P38698 397 aa3.87□□□□□ -1.79
SWI1YPL016W DIA4P38705 446 aaPredicted RBP3.87□□□□□ -1.79
SWI1YPL016W PIG2P40187 538 aa3.87□□□□□ -1.79
SWI1YPL016W LSC1P53598 329 aaKnown RBP3.87□□□□□ -1.79
SWI1YPL016W YNR063WP53749 607 aa3.87□□□□□ -1.79
SWI1YPL016W NIS1P53939 407 aa3.87□□□□□ -1.79
SWI1YPL016W SNZ1Q03148 297 aa3.87□□□□□ -1.79
SWI1YPL016W GSY1P23337 708 aa3.87□□□□□ -1.79
SWI1YPL016W TSR4P25040 408 aa3.87□□□□□ -1.79
SWI1YPL016W CBF2P32504 956 aa3.87□□□□□ -1.79
SWI1YPL016W PBP2P38151 413 aaKnown RBP RIP-Chip data3.87□□□□□ -1.79not detected
SWI1YPL016W GPB2P39717 880 aa3.87□□□□□ -1.79
SWI1YPL016W PDS1P40316 373 aaPredicted RBP3.87□□□□□ -1.79
SWI1YPL016W KAP114P53067 1004 aa3.87□□□□□ -1.79
SWI1YPL016W YGR054WP53235 642 aaKnown RBP3.87□□□□□ -1.79
SWI1YPL016W NAF1P53919 492 aaKnown RBP3.87□□□□□ -1.79
SWI1YPL016W YLR287CQ05881 355 aa3.87□□□□□ -1.79
SWI1YPL016W NBA1Q08229 501 aaKnown RBP3.87□□□□□ -1.79
SWI1YPL016W GLO4Q12320 285 aa3.87□□□□□ -1.79
SWI1YPL016W DGK1Q12382 290 aa3.87□□□□□ -1.79
SWI1YPL016W GTT2Q12390 233 aa3.87□□□□□ -1.79
SWI1YPL016W TAL1P15019 335 aaKnown RBP3.87□□□□□ -1.79
SWI1YPL016W CDC13P32797 924 aaKnown RBP3.87□□□□□ -1.79
SWI1YPL016W MCM7P38132 845 aa3.87□□□□□ -1.79
SWI1YPL016W OCA5P38738 679 aa3.87□□□□□ -1.79
SWI1YPL016W YHL008CP38750 627 aa3.87□□□□□ -1.79
SWI1YPL016W DIM1P41819 318 aaKnown RBP3.87□□□□□ -1.79
SWI1YPL016W SGM1P47166 707 aa3.87□□□□□ -1.79
SWI1YPL016W IMD3P50095 523 aaKnown RBP3.87□□□□□ -1.79
SWI1YPL016W SEH1P53011 349 aaKnown RBP3.87□□□□□ -1.79
SWI1YPL016W HDA1P53973 706 aa3.87□□□□□ -1.79
SWI1YPL016W UBP2Q01476 1272 aa3.87□□□□□ -1.79
SWI1YPL016W FDC1Q03034 503 aa3.87□□□□□ -1.79
SWI1YPL016W MTC5Q03897 1148 aa3.87□□□□□ -1.79
SWI1YPL016W VCX1Q99385 411 aa3.87□□□□□ -1.79
SWI1YPL016W COR1P07256 457 aa3.86□□□□□ -1.79
SWI1YPL016W ILV2P07342 687 aaKnown RBP3.86□□□□□ -1.79
SWI1YPL016W CDC6P09119 513 aa3.86□□□□□ -1.79
SWI1YPL016W DMC1P25453 334 aa3.86□□□□□ -1.79
SWI1YPL016W PDC6P26263 563 aaKnown RBP3.86□□□□□ -1.79
SWI1YPL016W TFC1P32367 649 aa3.86□□□□□ -1.79
SWI1YPL016W PET127P32606 800 aa3.86□□□□□ -1.79
SWI1YPL016W RPC25P35718 212 aa3.86□□□□□ -1.79
SWI1YPL016W GEF1P37020 779 aa3.86□□□□□ -1.79
SWI1YPL016W ERG7P38604 731 aa3.86□□□□□ -1.79
SWI1YPL016W STP2P38704 541 aa3.86□□□□□ -1.79
SWI1YPL016W YJL107CP42947 387 aa3.86□□□□□ -1.79
SWI1YPL016W ROG3P43602 733 aa3.86□□□□□ -1.79
SWI1YPL016W GCV2P49095 1034 aa3.86□□□□□ -1.79
SWI1YPL016W NIT3P49954 291 aa3.86□□□□□ -1.79
SWI1YPL016W ALT1P52893 592 aa3.86□□□□□ -1.79
SWI1YPL016W SPC105P53148 917 aa3.86□□□□□ -1.79
SWI1YPL016W YNL144CP53907 740 aa3.86□□□□□ -1.79
SWI1YPL016W ABZ2Q03266 374 aa3.86□□□□□ -1.79
SWI1YPL016W CRR1Q05790 422 aa3.86□□□□□ -1.79
SWI1YPL016W STB3Q12427 513 aa3.86□□□□□ -1.79
SWI1YPL016W JIP3O13555 125 aa3.86□□□□□ -1.79
SWI1YPL016W RRT12P25381 491 aa3.86□□□□□ -1.79
SWI1YPL016W ETP1P38748 585 aaKnown RBP3.86□□□□□ -1.79
SWI1YPL016W PFK26P40433 827 aaKnown RBP3.86□□□□□ -1.79
SWI1YPL016W RPL34BP40525 121 aaKnown RBP3.86□□□□□ -1.79
SWI1YPL016W IMA5P40884 581 aa3.86□□□□□ -1.79
SWI1YPL016W EMW1P42842 904 aaKnown RBP3.86□□□□□ -1.79
SWI1YPL016W ALB1P47019 175 aaPredicted RBP3.86□□□□□ -1.79
SWI1YPL016W PEF1P53238 335 aa3.86□□□□□ -1.79
SWI1YPL016W ZDS2P54786 942 aa3.86□□□□□ -1.79
SWI1YPL016W GIR2Q03768 265 aaPredicted RBP3.86□□□□□ -1.79
SWI1YPL016W ACL4Q03771 387 aa3.86□□□□□ -1.79
SWI1YPL016W HMO1Q03973 246 aaKnown RBP3.86□□□□□ -1.79
SWI1YPL016W BUD22Q04347 519 aaKnown RBP3.86□□□□□ -1.79
SWI1YPL016W MLC2Q06580 163 aa3.86□□□□□ -1.79
SWI1YPL016W MHR1Q06630 226 aa3.86□□□□□ -1.79
SWI1YPL016W ERG12P07277 443 aa3.86□□□□□ -1.79
SWI1YPL016W TY1A-LR4P0C2I8 440 aaKnown RBP3.86□□□□□ -1.79
SWI1YPL016W TY1A-DR6P0CX70 440 aa3.86□□□□□ -1.79
SWI1YPL016W TY1A-ER1P0CX71 440 aa3.86□□□□□ -1.79
SWI1YPL016W TY1A-LR2P0CX72 440 aa3.86□□□□□ -1.79
SWI1YPL016W TY1A-PLP0CX73 440 aa3.86□□□□□ -1.79
SWI1YPL016W TY1A-JR1P0CX74 440 aa3.86□□□□□ -1.79
SWI1YPL016W TY1A-LR3P0CX75 440 aa3.86□□□□□ -1.79
SWI1YPL016W TY1A-ML2P0CX76 440 aa3.86□□□□□ -1.79
SWI1YPL016W OPI1P21957 404 aa3.86□□□□□ -1.79
SWI1YPL016W MCM5P29496 775 aaKnown RBP3.86□□□□□ -1.79
SWI1YPL016W EAP1P36041 632 aaKnown RBP3.86□□□□□ -1.79
SWI1YPL016W FRT2P39734 528 aa3.86□□□□□ -1.79
SWI1YPL016W ESL1P40456 1118 aa3.86□□□□□ -1.79
SWI1YPL016W SNL1P40548 159 aa3.86□□□□□ -1.79
SWI1YPL016W YJR039WP47107 1121 aa3.86□□□□□ -1.79
SWI1YPL016W FMP42Q04991 504 aa3.86□□□□□ -1.79
SWI1YPL016W RCN2Q12044 265 aa3.86□□□□□ -1.79
SWI1YPL016W TY1A-GR1Q12085 440 aa3.86□□□□□ -1.79
SWI1YPL016W ATP14Q12349 124 aa3.86□□□□□ -1.79
SWI1YPL016W FMP16Q12497 93 aa3.86□□□□□ -1.79
SWI1YPL016W TY1A-PR3Q6Q5H1 440 aaKnown RBP3.86□□□□□ -1.79
SWI1YPL016W TY1A-OLQ92392 440 aaKnown RBP3.86□□□□□ -1.79
SWI1YPL016W RPN13O13563 156 aa3.85□□□□□ -1.79
SWI1YPL016W CYB2P00175 591 aa3.85□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 70.5 ms