RNA–Protein interactions for RNA: YOR272W

YTM1, Transcript of Constituent of 66S pre-ribosomal particles, yeast

Gene YTM1, Length 1,383 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YTM1	YOR272W	RIA1	P53893	1110 aa		4.85	□□□□□ -1.63
YTM1	YOR272W	OMS1	Q06668	471 aa		4.85	□□□□□ -1.63
YTM1	YOR272W	ACF2	Q12168	779 aa		4.85	□□□□□ -1.63
YTM1	YOR272W	BNR1	P40450	1375 aa		4.85	□□□□□ -1.63
YTM1	YOR272W	QCR6	P00127	147 aa		4.84	□□□□□ -1.63
YTM1	YOR272W	ERG20	P08524	352 aa	Known RBP	4.84	□□□□□ -1.63
YTM1	YOR272W	FRS1	P15624	595 aa	Known RBP	4.84	□□□□□ -1.63
YTM1	YOR272W	MVD1	P32377	396 aa	Known RBP	4.84	□□□□□ -1.63
YTM1	YOR272W	YBR071W	P38243	211 aa		4.84	□□□□□ -1.63
YTM1	YOR272W	YHL017W	P38745	532 aa		4.84	□□□□□ -1.63
YTM1	YOR272W	FMO1	P38866	432 aa		4.84	□□□□□ -1.63
YTM1	YOR272W	GET2	P40056	285 aa		4.84	□□□□□ -1.63
YTM1	YOR272W	YAP1802	P53309	568 aa		4.84	□□□□□ -1.63
YTM1	YOR272W	VBA4	Q04602	768 aa	Known RBP	4.84	□□□□□ -1.63
YTM1	YOR272W	CLF1	Q12309	687 aa	Predicted RBP	4.84	□□□□□ -1.63
YTM1	YOR272W	RMP1	Q12530	201 aa		4.84	□□□□□ -1.63
YTM1	YOR272W	YKL033W-A	Q86ZR7	236 aa		4.84	□□□□□ -1.63
YTM1	YOR272W	SRB8	P25648	1427 aa		4.84	□□□□□ -1.64
YTM1	YOR272W	SSM4	P40318	1319 aa		4.84	□□□□□ -1.64
YTM1	YOR272W	USO1	P25386	1790 aa		4.84	□□□□□ -1.64
YTM1	YOR272W	RPS21A	P0C0V8	87 aa	Known RBP	4.83	□□□□□ -1.64
YTM1	YOR272W	AEP2	P22136	580 aa		4.83	□□□□□ -1.64
YTM1	YOR272W	HIR1	P32479	840 aa		4.83	□□□□□ -1.64
YTM1	YOR272W	YNL195C	P40168	261 aa		4.83	□□□□□ -1.64
YTM1	YOR272W	NOP15	P53927	220 aa	Predicted RBP	4.83	□□□□□ -1.64
YTM1	YOR272W	TIM44	Q01852	431 aa		4.83	□□□□□ -1.64
YTM1	YOR272W	POM34	Q12445	299 aa		4.83	□□□□□ -1.64
YTM1	YOR272W	ECM3	Q99252	613 aa		4.83	□□□□□ -1.64
YTM1	YOR272W	TY1B-NL2	Q99337	1749 aa	Known RBP	4.83	□□□□□ -1.64
YTM1	YOR272W	RPS17A	P02407	136 aa	Known RBP	4.82	□□□□□ -1.64
YTM1	YOR272W	SIR3	P06701	978 aa		4.82	□□□□□ -1.64
YTM1	YOR272W	RPS17B	P14127	136 aa	Known RBP	4.82	□□□□□ -1.64
YTM1	YOR272W	SEC15	P22224	910 aa		4.82	□□□□□ -1.64
YTM1	YOR272W	PRP22	P24384	1145 aa	Known RBP	4.82	□□□□□ -1.64
YTM1	YOR272W	KIN82	P25341	720 aa		4.82	□□□□□ -1.64
YTM1	YOR272W	YPT7	P32939	208 aa		4.82	□□□□□ -1.64
YTM1	YOR272W	GPP2	P40106	250 aa	Known RBP	4.82	□□□□□ -1.64
YTM1	YOR272W	TEL2	P53038	688 aa		4.82	□□□□□ -1.64
YTM1	YOR272W	EAF7	P53911	425 aa	Known RBP	4.82	□□□□□ -1.64
YTM1	YOR272W	SKY1	Q03656	742 aa		4.82	□□□□□ -1.64
YTM1	YOR272W	PPN1	Q04119	674 aa		4.82	□□□□□ -1.64
YTM1	YOR272W	NUP188	P52593	1655 aa	Known RBP	4.81	□□□□□ -1.64
YTM1	YOR272W	TOM20	P35180	183 aa		4.81	□□□□□ -1.64
YTM1	YOR272W	FAT1	P38225	669 aa		4.81	□□□□□ -1.64
YTM1	YOR272W	YAP3	P38749	330 aa		4.81	□□□□□ -1.64
YTM1	YOR272W	DUN1	P39009	513 aa		4.81	□□□□□ -1.64
YTM1	YOR272W	PXA1	P41909	870 aa		4.81	□□□□□ -1.64
YTM1	YOR272W	NIT2	P47016	307 aa		4.81	□□□□□ -1.64
YTM1	YOR272W	BIT61	P47041	543 aa		4.81	□□□□□ -1.64
YTM1	YOR272W	RNR4	P49723	345 aa	Known RBP	4.81	□□□□□ -1.64
YTM1	YOR272W	PAN2	P53010	1115 aa	Predicted RBP	4.81	□□□□□ -1.64
YTM1	YOR272W	SLI1	P53304	468 aa		4.81	□□□□□ -1.64
YTM1	YOR272W	SSL2	Q00578	843 aa		4.81	□□□□□ -1.64
YTM1	YOR272W	YMR206W	Q03695	313 aa		4.81	□□□□□ -1.64
YTM1	YOR272W	YPS7	Q06325	596 aa		4.81	□□□□□ -1.64
YTM1	YOR272W	THI22	Q06490	572 aa		4.81	□□□□□ -1.64
YTM1	YOR272W	VPS36	Q06696	566 aa		4.81	□□□□□ -1.64
YTM1	YOR272W	ZRT2	Q12436	422 aa		4.81	□□□□□ -1.64
YTM1	YOR272W	YLR419W	Q06698	1435 aa	Known RBP	4.8	□□□□□ -1.64
YTM1	YOR272W	OAR1	P35731	278 aa		4.8	□□□□□ -1.64
YTM1	YOR272W	BIT2	P38346	545 aa		4.8	□□□□□ -1.64
YTM1	YOR272W	SFB3	P38810	929 aa		4.8	□□□□□ -1.64
YTM1	YOR272W	PIG2	P40187	538 aa		4.8	□□□□□ -1.64
YTM1	YOR272W	IES1	P43579	692 aa		4.8	□□□□□ -1.64
YTM1	YOR272W	YJR120W	P47157	116 aa		4.8	□□□□□ -1.64
YTM1	YOR272W	ENP2	P48234	707 aa	Known RBP	4.8	□□□□□ -1.64
YTM1	YOR272W	FOL1	P53848	824 aa		4.8	□□□□□ -1.64
YTM1	YOR272W	MCH5	Q08777	521 aa		4.8	□□□□□ -1.64
YTM1	YOR272W	YPR027C	Q12079	277 aa		4.8	□□□□□ -1.64
YTM1	YOR272W	IML1	P47170	1584 aa		4.8	□□□□□ -1.64
YTM1	YOR272W	GLN4	P13188	809 aa	Known RBP	4.79	□□□□□ -1.64
YTM1	YOR272W	IME1	P21190	360 aa		4.79	□□□□□ -1.64
YTM1	YOR272W	PRP28	P23394	588 aa		4.79	□□□□□ -1.64
YTM1	YOR272W	BCS1	P32839	456 aa		4.79	□□□□□ -1.64
YTM1	YOR272W	SEC6	P32844	805 aa		4.79	□□□□□ -1.64
YTM1	YOR272W	EMP65	P40085	556 aa		4.79	□□□□□ -1.64
YTM1	YOR272W	STB4	P50104	949 aa		4.79	□□□□□ -1.64
YTM1	YOR272W	SPC105	P53148	917 aa		4.79	□□□□□ -1.64
YTM1	YOR272W	COG6	P53959	839 aa		4.79	□□□□□ -1.64
YTM1	YOR272W	NSE5	Q03718	556 aa		4.79	□□□□□ -1.64
YTM1	YOR272W	STP4	Q07351	490 aa		4.79	□□□□□ -1.64
YTM1	YOR272W	HBT1	Q07653	1046 aa	Known RBP	4.79	□□□□□ -1.64
YTM1	YOR272W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.79	□□□□□ -1.64	not detected
YTM1	YOR272W	RPS9B	P05755	195 aa	Known RBP	4.78	□□□□□ -1.64
YTM1	YOR272W	DGR2	P32330	852 aa		4.78	□□□□□ -1.64
YTM1	YOR272W	DAL3	P32459	195 aa		4.78	□□□□□ -1.64
YTM1	YOR272W	PHO11	P35842	467 aa		4.78	□□□□□ -1.64
YTM1	YOR272W	MOH1	P38191	138 aa		4.78	□□□□□ -1.64
YTM1	YOR272W	PHO12	P38693	467 aa		4.78	□□□□□ -1.64
YTM1	YOR272W	PCL5	P38794	229 aa		4.78	□□□□□ -1.64
YTM1	YOR272W	VID28	P40547	921 aa		4.78	□□□□□ -1.64
YTM1	YOR272W	BUD8	P41698	603 aa		4.78	□□□□□ -1.64
YTM1	YOR272W	SLD3	P53135	668 aa		4.78	□□□□□ -1.64
YTM1	YOR272W	RCR2	Q03446	210 aa	Known RBP	4.78	□□□□□ -1.64
YTM1	YOR272W	VMR1	P38735	1592 aa		4.78	□□□□□ -1.64
YTM1	YOR272W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.78	□□□□□ -1.64	not detected
YTM1	YOR272W	FEN2	P25621	512 aa	Known RBP	4.78	□□□□□ -1.64
YTM1	YOR272W	CBR1	P38626	284 aa	Known RBP	4.78	□□□□□ -1.64
YTM1	YOR272W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.78	□□□□□ -1.64	not detected
YTM1	YOR272W	TAF4	P50105	388 aa		4.78	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 62.1 ms