RNA–Protein interactions for RNA: YLR005W

SSL1, Transcript of Subunit of the core form of RNA polymerase transcription factor TFIIH, yeastyeast

Gene SSL1, Length 1,386 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSL1YLR005W DPH2P32461 534 aa4.28□□□□□ -1.72
SSL1YLR005W SKG6P32900 734 aaPredicted RBP4.28□□□□□ -1.72
SSL1YLR005W CCL1P37366 393 aa4.28□□□□□ -1.72
SSL1YLR005W RFS1P38234 210 aaKnown RBP4.28□□□□□ -1.72
SSL1YLR005W CCC2P38995 1004 aa4.28□□□□□ -1.72
SSL1YLR005W PCI8P40512 444 aa4.28□□□□□ -1.72
SSL1YLR005W SAD1P43589 448 aa4.28□□□□□ -1.72
SSL1YLR005W HNT2P49775 206 aa4.28□□□□□ -1.72
SSL1YLR005W YKE2P52553 114 aa4.28□□□□□ -1.72
SSL1YLR005W ENV11P53246 860 aa4.28□□□□□ -1.72
SSL1YLR005W MRI1Q06489 411 aaKnown RBP4.28□□□□□ -1.72
SSL1YLR005W VTS1Q08831 523 aaKnown RBP RIP-Chip data4.28□□□□□ -1.72not detected
SSL1YLR005W LAA1P39526 2014 aa4.28□□□□□ -1.72
SSL1YLR005W IRA2P19158 3079 aa4.28□□□□□ -1.73
SSL1YLR005W YLR358CO13565 187 aa4.27□□□□□ -1.73
SSL1YLR005W ATP1P07251 545 aaKnown RBP4.27□□□□□ -1.73
SSL1YLR005W MATALPHA2P0CY08 210 aa4.27□□□□□ -1.73
SSL1YLR005W HMLALPHA2P0CY09 210 aa4.27□□□□□ -1.73
SSL1YLR005W HMG2P12684 1045 aa4.27□□□□□ -1.73
SSL1YLR005W APE1P14904 514 aa4.27□□□□□ -1.73
SSL1YLR005W CBP3P21560 335 aa4.27□□□□□ -1.73
SSL1YLR005W SWI4P25302 1093 aaKnown RBP4.27□□□□□ -1.73
SSL1YLR005W PUP3P25451 205 aaKnown RBP4.27□□□□□ -1.73
SSL1YLR005W VPH1P32563 840 aaKnown RBP4.27□□□□□ -1.73
SSL1YLR005W TMT1P32643 299 aa4.27□□□□□ -1.73
SSL1YLR005W ATG19P35193 415 aa4.27□□□□□ -1.73
SSL1YLR005W YLH47Q06493 454 aa4.27□□□□□ -1.73
SSL1YLR005W DNL4Q08387 944 aaPredicted RBP4.27□□□□□ -1.73
SSL1YLR005W SGO1Q08490 590 aa4.27□□□□□ -1.73
SSL1YLR005W RIB2Q12362 591 aaKnown RBP4.27□□□□□ -1.73
SSL1YLR005W RPL11AP0C0W9 174 aaKnown RBP4.27□□□□□ -1.73
SSL1YLR005W GLN3P18494 730 aa4.27□□□□□ -1.73
SSL1YLR005W RPC53P25441 422 aa4.27□□□□□ -1.73
SSL1YLR005W CSE2P33308 149 aa4.27□□□□□ -1.73
SSL1YLR005W DUT1P33317 147 aa4.27□□□□□ -1.73
SSL1YLR005W SHM2P37291 469 aaKnown RBP4.27□□□□□ -1.73
SSL1YLR005W MRX3P38172 270 aa4.27□□□□□ -1.73
SSL1YLR005W ARP5P53946 755 aa4.27□□□□□ -1.73
SSL1YLR005W CLU1Q03690 1277 aaKnown RBP4.27□□□□□ -1.73
SSL1YLR005W TIP41Q12199 356 aa4.27□□□□□ -1.73
SSL1YLR005W OSW2Q12202 724 aa4.27□□□□□ -1.73
SSL1YLR005W YOR022CQ12204 715 aa4.27□□□□□ -1.73
SSL1YLR005W RRD2Q12461 358 aa4.27□□□□□ -1.73
SSL1YLR005W RPL11BQ3E757 174 aaPredicted RBP4.27□□□□□ -1.73
SSL1YLR005W BEM2P39960 2167 aaKnown RBP4.26□□□□□ -1.73
SSL1YLR005W KGD2P19262 463 aaPredicted RBP4.26□□□□□ -1.73
SSL1YLR005W HCA4P20448 770 aaKnown RBP4.26□□□□□ -1.73
SSL1YLR005W RSA4P25382 515 aaKnown RBP4.26□□□□□ -1.73
SSL1YLR005W PET112P33893 541 aa4.26□□□□□ -1.73
SSL1YLR005W HMT1P38074 348 aa4.26□□□□□ -1.73
SSL1YLR005W RPN10P38886 268 aaKnown RBP4.26□□□□□ -1.73
SSL1YLR005W KRI1P42846 591 aaKnown RBP4.26□□□□□ -1.73
SSL1YLR005W SHE10P53075 577 aa4.26□□□□□ -1.73
SSL1YLR005W GTF1P53260 183 aaPredicted RBP4.26□□□□□ -1.73
SSL1YLR005W DIP5P53388 608 aa4.26□□□□□ -1.73
SSL1YLR005W EEB1Q02891 456 aa4.26□□□□□ -1.73
SSL1YLR005W NSE5Q03718 556 aa4.26□□□□□ -1.73
SSL1YLR005W FUS2Q05670 677 aa4.26□□□□□ -1.73
SSL1YLR005W SLK19Q08581 821 aaKnown RBP4.26□□□□□ -1.73
SSL1YLR005W TMA46Q12000 345 aaKnown RBP4.26□□□□□ -1.73
SSL1YLR005W PKH2Q12236 1081 aaKnown RBP4.26□□□□□ -1.73
SSL1YLR005W SMC6Q12749 1114 aa4.26□□□□□ -1.73
SSL1YLR005W TRP2P00899 507 aaKnown RBP4.25□□□□□ -1.73
SSL1YLR005W BI4P03879 638 aa4.25□□□□□ -1.73
SSL1YLR005W HAP2P06774 265 aa4.25□□□□□ -1.73
SSL1YLR005W KIN2P13186 1147 aaKnown RBP4.25□□□□□ -1.73
SSL1YLR005W CYS3P31373 394 aaKnown RBP4.25□□□□□ -1.73
SSL1YLR005W COT1P32798 439 aa4.25□□□□□ -1.73
SSL1YLR005W HEL1P36113 551 aa4.25□□□□□ -1.73
SSL1YLR005W ARP1P38696 384 aa4.25□□□□□ -1.73
SSL1YLR005W STT3P39007 718 aaKnown RBP4.25□□□□□ -1.73
SSL1YLR005W YIR016WP40572 265 aa4.25□□□□□ -1.73
SSL1YLR005W EPL1P43572 832 aa4.25□□□□□ -1.73
SSL1YLR005W MNP1P53163 194 aaPredicted RBP4.25□□□□□ -1.73
SSL1YLR005W CUL3P53202 744 aa4.25□□□□□ -1.73
SSL1YLR005W TPO2P53283 614 aa4.25□□□□□ -1.73
SSL1YLR005W RTT102P53330 157 aa4.25□□□□□ -1.73
SSL1YLR005W RTC4P53850 401 aa4.25□□□□□ -1.73
SSL1YLR005W NCS2P53923 493 aaPredicted RBP4.25□□□□□ -1.73
SSL1YLR005W LEE1Q02799 301 aaKnown RBP4.25□□□□□ -1.73
SSL1YLR005W RCR2Q03446 210 aaKnown RBP4.25□□□□□ -1.73
SSL1YLR005W ECM7Q06200 448 aa4.25□□□□□ -1.73
SSL1YLR005W SPP382Q06411 708 aaPredicted RBP4.25□□□□□ -1.73
SSL1YLR005W SPE3Q12074 293 aaKnown RBP4.25□□□□□ -1.73
SSL1YLR005W GNT1Q12096 491 aa4.25□□□□□ -1.73
SSL1YLR005W ADE4P04046 510 aaKnown RBP4.24□□□□□ -1.73
SSL1YLR005W INO1P11986 533 aa4.24□□□□□ -1.73
SSL1YLR005W CDC34P14682 295 aa4.24□□□□□ -1.73
SSL1YLR005W CKA2P19454 339 aa4.24□□□□□ -1.73
SSL1YLR005W HCM1P25364 564 aa4.24□□□□□ -1.73
SSL1YLR005W LYP1P32487 611 aa4.24□□□□□ -1.73
SSL1YLR005W YHL017WP38745 532 aa4.24□□□□□ -1.73
SSL1YLR005W TAT2P38967 592 aa4.24□□□□□ -1.73
SSL1YLR005W MPT5P39016 859 aaKnown RBP RIP-Chip data4.24□□□□□ -1.73not detected
SSL1YLR005W BUD6P41697 788 aa4.24□□□□□ -1.73
SSL1YLR005W MAF1P41910 395 aa4.24□□□□□ -1.73
SSL1YLR005W YGR153WP48238 217 aa4.24□□□□□ -1.73
SSL1YLR005W YGL081WP53156 320 aa4.24□□□□□ -1.73
SSL1YLR005W TYW3P53177 273 aa4.24□□□□□ -1.73
SSL1YLR005W PGA2P53903 129 aa4.24□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 114.4 ms