RNA–Protein interactions for RNA: YIL017C

VID28, Transcript of GID Complex subunit, serves as adaptor for regulatory subunit Vid24p, yeast

Gene VID28, Length 2,766 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VID28	YIL017C	RPC53	P25441	422 aa		4.24	□□□□□ -1.73
VID28	YIL017C	POL4	P25615	582 aa		4.24	□□□□□ -1.73
VID28	YIL017C	PDC6	P26263	563 aa	Known RBP	4.24	□□□□□ -1.73
VID28	YIL017C	LRG1	P35688	1017 aa		4.24	□□□□□ -1.73
VID28	YIL017C	MYO3	P36006	1272 aa		4.24	□□□□□ -1.73
VID28	YIL017C	NTR2	P36118	322 aa	Predicted RBP	4.24	□□□□□ -1.73
VID28	YIL017C	ATP3	P38077	311 aa	Known RBP	4.24	□□□□□ -1.73
VID28	YIL017C	OCA5	P38738	679 aa		4.24	□□□□□ -1.73
VID28	YIL017C	IES1	P43579	692 aa		4.24	□□□□□ -1.73
VID28	YIL017C	ACF4	P47129	309 aa		4.24	□□□□□ -1.73
VID28	YIL017C	DAK1	P54838	584 aa	Known RBP	4.24	□□□□□ -1.73
VID28	YIL017C	UME1	Q03010	460 aa		4.24	□□□□□ -1.73
VID28	YIL017C	EMI2	Q04409	500 aa	Known RBP	4.24	□□□□□ -1.73
VID28	YIL017C	ARR2	Q06597	130 aa		4.24	□□□□□ -1.73
VID28	YIL017C	SGO1	Q08490	590 aa		4.24	□□□□□ -1.73
VID28	YIL017C	TRE1	Q08919	783 aa		4.24	□□□□□ -1.73
VID28	YIL017C	RTP1	Q12751	981 aa		4.24	□□□□□ -1.73
VID28	YIL017C	TUB3	P09734	445 aa	Known RBP	4.24	□□□□□ -1.73
VID28	YIL017C	MSS116	P15424	664 aa	Known RBP	4.24	□□□□□ -1.73
VID28	YIL017C	YAP1	P19880	650 aa	Known RBP	4.24	□□□□□ -1.73
VID28	YIL017C	SPB1	P25582	841 aa	Predicted RBP	4.24	□□□□□ -1.73
VID28	YIL017C	RPT5	P33297	434 aa	Known RBP	4.24	□□□□□ -1.73
VID28	YIL017C	ETR1	P38071	380 aa		4.24	□□□□□ -1.73
VID28	YIL017C	TSC10	P38342	320 aa		4.24	□□□□□ -1.73
VID28	YIL017C	RPT2	P40327	437 aa	Known RBP	4.24	□□□□□ -1.73
VID28	YIL017C	RRD1	P40454	393 aa	Known RBP	4.24	□□□□□ -1.73
VID28	YIL017C	PRK1	P40494	810 aa		4.24	□□□□□ -1.73
VID28	YIL017C	RRN7	P40992	514 aa		4.24	□□□□□ -1.73
VID28	YIL017C	RVB1	Q03940	463 aa	Known RBP	4.24	□□□□□ -1.73
VID28	YIL017C	GAL83	Q04739	417 aa		4.24	□□□□□ -1.73
VID28	YIL017C	COQ9	Q05779	260 aa		4.24	□□□□□ -1.73
VID28	YIL017C	YCS4	Q06156	1176 aa		4.24	□□□□□ -1.73
VID28	YIL017C	YPR196W	Q06595	470 aa		4.24	□□□□□ -1.73
VID28	YIL017C	CLP1	Q08685	445 aa	Predicted RBP	4.24	□□□□□ -1.73
VID28	YIL017C	CEX1	Q12453	761 aa		4.24	□□□□□ -1.73
VID28	YIL017C	TRM11	Q12463	433 aa		4.24	□□□□□ -1.73
VID28	YIL017C	RKM4	Q12504	494 aa		4.24	□□□□□ -1.73
VID28	YIL017C	PTC5	Q12511	572 aa		4.24	□□□□□ -1.73
VID28	YIL017C	KIN2	P13186	1147 aa	Known RBP	4.23	□□□□□ -1.73
VID28	YIL017C	ATP12	P22135	325 aa		4.23	□□□□□ -1.73
VID28	YIL017C	VPS21	P36017	210 aa	Known RBP	4.23	□□□□□ -1.73
VID28	YIL017C	YKR078W	P36158	585 aa	Known RBP	4.23	□□□□□ -1.73
VID28	YIL017C	MAK5	P38112	773 aa	Predicted RBP	4.23	□□□□□ -1.73
VID28	YIL017C	UBP13	P38187	747 aa		4.23	□□□□□ -1.73
VID28	YIL017C	RPN10	P38886	268 aa	Known RBP	4.23	□□□□□ -1.73
VID28	YIL017C	PFK26	P40433	827 aa	Known RBP	4.23	□□□□□ -1.73
VID28	YIL017C	PAC11	P40960	533 aa		4.23	□□□□□ -1.73
VID28	YIL017C	MDV1	P47025	714 aa		4.23	□□□□□ -1.73
VID28	YIL017C	YJR107W	P47145	328 aa		4.23	□□□□□ -1.73
VID28	YIL017C	ENT3	P47160	408 aa		4.23	□□□□□ -1.73
VID28	YIL017C	MRM2	P53123	320 aa		4.23	□□□□□ -1.73
VID28	YIL017C	MDM1	Q01846	1127 aa		4.23	□□□□□ -1.73
VID28	YIL017C	MEC3	Q02574	474 aa		4.23	□□□□□ -1.73
VID28	YIL017C	FIN1	Q03898	291 aa		4.23	□□□□□ -1.73
VID28	YIL017C	HDA3	Q06623	655 aa		4.23	□□□□□ -1.73
VID28	YIL017C	PUN1	Q06991	263 aa		4.23	□□□□□ -1.73
VID28	YIL017C	BRE4	Q07660	1125 aa		4.23	□□□□□ -1.73
VID28	YIL017C	GYP1	Q08484	637 aa		4.23	□□□□□ -1.73
VID28	YIL017C	PUS7	Q08647	676 aa	Known RBP	4.23	□□□□□ -1.73
VID28	YIL017C	ACF2	Q12168	779 aa		4.23	□□□□□ -1.73
VID28	YIL017C	ERG11	P10614	530 aa		4.23	□□□□□ -1.73
VID28	YIL017C	RAD4	P14736	754 aa		4.23	□□□□□ -1.73
VID28	YIL017C	PHO3	P24031	467 aa		4.23	□□□□□ -1.73
VID28	YIL017C	TFC1	P32367	649 aa		4.23	□□□□□ -1.73
VID28	YIL017C	SAC6	P32599	642 aa	Known RBP	4.23	□□□□□ -1.73
VID28	YIL017C	YPK3	P38070	525 aa		4.23	□□□□□ -1.73
VID28	YIL017C	NPT1	P39683	429 aa	Known RBP	4.23	□□□□□ -1.73
VID28	YIL017C	MTW1	P39731	289 aa		4.23	□□□□□ -1.73
VID28	YIL017C	YJL070C	P40361	888 aa		4.23	□□□□□ -1.73
VID28	YIL017C	QDR1	P40475	563 aa		4.23	□□□□□ -1.73
VID28	YIL017C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.23	□□□□□ -1.73	not detected
VID28	YIL017C	NMD5	P46970	1048 aa		4.23	□□□□□ -1.73
VID28	YIL017C	ZIP2	P53061	704 aa		4.23	□□□□□ -1.73
VID28	YIL017C	ARO8	P53090	500 aa	Known RBP	4.23	□□□□□ -1.73
VID28	YIL017C	SFB2	P53953	876 aa		4.23	□□□□□ -1.73
VID28	YIL017C	CEG1	Q01159	459 aa	Predicted RBP	4.23	□□□□□ -1.73
VID28	YIL017C	ABZ2	Q03266	374 aa		4.23	□□□□□ -1.73
VID28	YIL017C	NNT1	Q05874	261 aa		4.23	□□□□□ -1.73
VID28	YIL017C	ISR1	Q06098	443 aa	Known RBP	4.23	□□□□□ -1.73
VID28	YIL017C	YPQ2	Q06328	317 aa		4.23	□□□□□ -1.73
VID28	YIL017C	YAP7	Q08182	245 aa		4.23	□□□□□ -1.73
VID28	YIL017C	BAG7	Q12128	409 aa		4.23	□□□□□ -1.73
VID28	YIL017C	YLR125W	Q12138	136 aa		4.23	□□□□□ -1.73
VID28	YIL017C	ATG11	Q12527	1178 aa		4.23	□□□□□ -1.73
VID28	YIL017C	PGA3	Q12746	312 aa	Known RBP	4.23	□□□□□ -1.73
VID28	YIL017C	FOB1	O13329	566 aa		4.22	□□□□□ -1.73
VID28	YIL017C	RPL6B	P05739	176 aa	Known RBP	4.22	□□□□□ -1.73
VID28	YIL017C	LEU1	P07264	779 aa	Known RBP	4.22	□□□□□ -1.73
VID28	YIL017C	CLN3	P13365	580 aa		4.22	□□□□□ -1.73
VID28	YIL017C	KSS1	P14681	368 aa		4.22	□□□□□ -1.73
VID28	YIL017C	RPB4	P20433	221 aa	Predicted RBP	4.22	□□□□□ -1.73
VID28	YIL017C	SWI4	P25302	1093 aa	Known RBP	4.22	□□□□□ -1.73
VID28	YIL017C	ACH1	P32316	526 aa		4.22	□□□□□ -1.73
VID28	YIL017C	TRZ1	P36159	838 aa	Predicted RBP	4.22	□□□□□ -1.73
VID28	YIL017C	VMA22	P38784	181 aa		4.22	□□□□□ -1.73
VID28	YIL017C	SAH1	P39954	449 aa	Known RBP	4.22	□□□□□ -1.73
VID28	YIL017C	XKS1	P42826	600 aa		4.22	□□□□□ -1.73
VID28	YIL017C	HAM1	P47119	197 aa	Known RBP	4.22	□□□□□ -1.73
VID28	YIL017C	YPT32	P51996	222 aa	Known RBP	4.22	□□□□□ -1.73
VID28	YIL017C	NUT1	P53114	1132 aa		4.22	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 19.4 ms