RNA–Protein interactions for RNA: YHR031C

RRM3, Transcript of DNA helicase involved in rDNA replication and Ty1 transposition, yeast

Gene RRM3, Length 2,172 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRM3	YHR031C	YKL100C	P34248	587 aa		3.16	□□□□□ -1.9
RRM3	YHR031C	MRPL17	P36528	281 aa		3.16	□□□□□ -1.9
RRM3	YHR031C	HSE1	P38753	452 aa		3.16	□□□□□ -1.9
RRM3	YHR031C	CCT3	P39077	534 aa	Known RBP	3.16	□□□□□ -1.9
RRM3	YHR031C	ALD5	P40047	520 aa	Known RBP	3.16	□□□□□ -1.9
RRM3	YHR031C	MRX1	P40050	688 aa		3.16	□□□□□ -1.9
RRM3	YHR031C	SEC28	P40509	296 aa	Known RBP	3.16	□□□□□ -1.9
RRM3	YHR031C	YJR054W	P47114	497 aa		3.16	□□□□□ -1.9
RRM3	YHR031C	YJR079W	P47126	109 aa		3.16	□□□□□ -1.9
RRM3	YHR031C	VMA10	P48836	114 aa	Known RBP	3.16	□□□□□ -1.9
RRM3	YHR031C	ATP22	P50273	684 aa	Predicted RBP	3.16	□□□□□ -1.9
RRM3	YHR031C	YGR122W	P53272	402 aa		3.16	□□□□□ -1.9
RRM3	YHR031C	MRPL50	P53724	139 aa		3.16	□□□□□ -1.9
RRM3	YHR031C	ARC35	P53731	342 aa	Known RBP	3.16	□□□□□ -1.9
RRM3	YHR031C	GOR1	P53839	350 aa		3.16	□□□□□ -1.9
RRM3	YHR031C	CWC25	P53854	179 aa	Known RBP	3.16	□□□□□ -1.9
RRM3	YHR031C	SHE9	Q04172	456 aa		3.16	□□□□□ -1.9
RRM3	YHR031C	YLR287C	Q05881	355 aa		3.16	□□□□□ -1.9
RRM3	YHR031C	SEC10	Q06245	871 aa		3.16	□□□□□ -1.9
RRM3	YHR031C	YLR177W	Q06251	628 aa		3.16	□□□□□ -1.9
RRM3	YHR031C	YLR352W	Q06479	807 aa		3.16	□□□□□ -1.9
RRM3	YHR031C	YCG1	Q06680	1035 aa		3.16	□□□□□ -1.9
RRM3	YHR031C	DTD1	Q07648	150 aa	Known RBP	3.16	□□□□□ -1.9
RRM3	YHR031C	MCD1	Q12158	566 aa		3.16	□□□□□ -1.9
RRM3	YHR031C	WTM2	Q12206	467 aa		3.16	□□□□□ -1.9
RRM3	YHR031C	ARP6	Q12509	438 aa		3.16	□□□□□ -1.9
RRM3	YHR031C	LAM4	P38800	1345 aa		3.16	□□□□□ -1.9
RRM3	YHR031C	TUS1	Q06412	1307 aa		3.16	□□□□□ -1.9
RRM3	YHR031C	DAT1	P13483	248 aa	Known RBP	3.15	□□□□□ -1.9
RRM3	YHR031C	ALG1	P16661	449 aa		3.15	□□□□□ -1.9
RRM3	YHR031C	PRP5	P21372	849 aa	Predicted RBP	3.15	□□□□□ -1.9
RRM3	YHR031C	NTG1	P31378	399 aa		3.15	□□□□□ -1.9
RRM3	YHR031C	VPS21	P36017	210 aa	Known RBP	3.15	□□□□□ -1.9
RRM3	YHR031C	RRN3	P36070	627 aa		3.15	□□□□□ -1.9
RRM3	YHR031C	TYS1	P36421	394 aa	Known RBP	3.15	□□□□□ -1.9
RRM3	YHR031C	POP7	P38291	140 aa		3.15	□□□□□ -1.9
RRM3	YHR031C	MSR1	P38714	643 aa		3.15	□□□□□ -1.9
RRM3	YHR031C	LSM12	P38828	187 aa	Known RBP	3.15	□□□□□ -1.9
RRM3	YHR031C	RSP5	P39940	809 aa	Known RBP	3.15	□□□□□ -1.9
RRM3	YHR031C	EDC3	P39998	551 aa	Known RBP	3.15	□□□□□ -1.9
RRM3	YHR031C	YER137C	P40083	148 aa	Known RBP	3.15	□□□□□ -1.9
RRM3	YHR031C	MKT1	P40850	830 aa	Known RBP	3.15	□□□□□ -1.9
RRM3	YHR031C	BNA6	P43619	295 aa		3.15	□□□□□ -1.9
RRM3	YHR031C	GNP1	P48813	663 aa		3.15	□□□□□ -1.9
RRM3	YHR031C	ZIP2	P53061	704 aa		3.15	□□□□□ -1.9
RRM3	YHR031C	TYW3	P53177	273 aa		3.15	□□□□□ -1.9
RRM3	YHR031C	YGR053C	P53234	283 aa		3.15	□□□□□ -1.9
RRM3	YHR031C	RBG2	P53295	368 aa	Known RBP	3.15	□□□□□ -1.9
RRM3	YHR031C	MAL13	P53338	473 aa		3.15	□□□□□ -1.9
RRM3	YHR031C	HEF3	P53978	1044 aa	Known RBP	3.15	□□□□□ -1.9
RRM3	YHR031C	SRL4	Q03085	281 aa		3.15	□□□□□ -1.9
RRM3	YHR031C	YMR265C	Q03508	461 aa	Known RBP	3.15	□□□□□ -1.9
RRM3	YHR031C	VPS64	Q03944	604 aa		3.15	□□□□□ -1.9
RRM3	YHR031C	SND1	Q04007	877 aa		3.15	□□□□□ -1.9
RRM3	YHR031C	SPC2	Q04969	178 aa		3.15	□□□□□ -1.9
RRM3	YHR031C	DXO1	Q06349	442 aa		3.15	□□□□□ -1.9
RRM3	YHR031C	NOP6	Q07623	225 aa	Known RBP	3.15	□□□□□ -1.9
RRM3	YHR031C	YLR125W	Q12138	136 aa		3.15	□□□□□ -1.9
RRM3	YHR031C	ADR1	P07248	1323 aa		3.15	□□□□□ -1.9
RRM3	YHR031C	JIP3	O13555	125 aa		3.15	□□□□□ -1.91
RRM3	YHR031C	HXK1	P04806	485 aa	Known RBP	3.15	□□□□□ -1.91
RRM3	YHR031C	HSP60	P19882	572 aa	Known RBP	3.15	□□□□□ -1.91
RRM3	YHR031C	URA4	P20051	364 aa		3.15	□□□□□ -1.91
RRM3	YHR031C	DBP3	P20447	523 aa	Known RBP	3.15	□□□□□ -1.91
RRM3	YHR031C	CRM1	P30822	1084 aa	Known RBP	3.15	□□□□□ -1.91
RRM3	YHR031C	THI4	P32318	326 aa		3.15	□□□□□ -1.91
RRM3	YHR031C	ASF2	P32448	525 aa	Predicted RBP	3.15	□□□□□ -1.91
RRM3	YHR031C	HIR1	P32479	840 aa		3.15	□□□□□ -1.91
RRM3	YHR031C	CBF2	P32504	956 aa		3.15	□□□□□ -1.91
RRM3	YHR031C	MAC1	P35192	417 aa		3.15	□□□□□ -1.91
RRM3	YHR031C	YKL050C	P35736	922 aa		3.15	□□□□□ -1.91
RRM3	YHR031C	TEF4	P36008	412 aa	Known RBP	3.15	□□□□□ -1.91
RRM3	YHR031C	YPT52	P36018	234 aa	Known RBP	3.15	□□□□□ -1.91
RRM3	YHR031C	ALG3	P38179	458 aa		3.15	□□□□□ -1.91
RRM3	YHR031C	KEL1	P38853	1164 aa	Known RBP	3.15	□□□□□ -1.91
RRM3	YHR031C	REV7	P38927	245 aa		3.15	□□□□□ -1.91
RRM3	YHR031C	LYS14	P40971	790 aa		3.15	□□□□□ -1.91
RRM3	YHR031C	GPP1	P41277	250 aa	Known RBP	3.15	□□□□□ -1.91
RRM3	YHR031C	IMD3	P50095	523 aa	Known RBP	3.15	□□□□□ -1.91
RRM3	YHR031C	PAN2	P53010	1115 aa	Predicted RBP	3.15	□□□□□ -1.91
RRM3	YHR031C	GPG1	P53130	126 aa		3.15	□□□□□ -1.91
RRM3	YHR031C	HOL1	P53389	586 aa		3.15	□□□□□ -1.91
RRM3	YHR031C	RET3	P53600	189 aa		3.15	□□□□□ -1.91
RRM3	YHR031C	YNL193W	P53870	558 aa		3.15	□□□□□ -1.91
RRM3	YHR031C	ALF1	P53904	254 aa		3.15	□□□□□ -1.91
RRM3	YHR031C	FCP1	Q03254	732 aa		3.15	□□□□□ -1.91
RRM3	YHR031C	YCS4	Q06156	1176 aa		3.15	□□□□□ -1.91
RRM3	YHR031C	PIG1	Q06216	648 aa		3.15	□□□□□ -1.91
RRM3	YHR031C	VIP1	Q06685	1146 aa	Known RBP	3.15	□□□□□ -1.91
RRM3	YHR031C	ADY3	Q07732	790 aa		3.15	□□□□□ -1.91
RRM3	YHR031C	UIP4	Q08926	304 aa		3.15	□□□□□ -1.91
RRM3	YHR031C	FLC1	Q08967	793 aa		3.15	□□□□□ -1.91
RRM3	YHR031C	YDR215C	Q12240	137 aa		3.15	□□□□□ -1.91
RRM3	YHR031C	RRI2	Q12348	645 aa		3.15	□□□□□ -1.91
RRM3	YHR031C	ATP4	P05626	244 aa		3.14	□□□□□ -1.91
RRM3	YHR031C	RAP1	P11938	827 aa		3.14	□□□□□ -1.91
RRM3	YHR031C	KIN2	P13186	1147 aa	Known RBP	3.14	□□□□□ -1.91
RRM3	YHR031C	MSD1	P15179	658 aa	Known RBP	3.14	□□□□□ -1.91
RRM3	YHR031C	NCP1	P16603	691 aa	Known RBP	3.14	□□□□□ -1.91
RRM3	YHR031C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	3.14	□□□□□ -1.91	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 77.5 ms