RNA–Protein interactions for RNA: YGL155W

CDC43, Transcript of Beta subunit of geranylgeranyltransferase type I, yeastyeast

Gene CDC43, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC43YGL155W SBE2P42223 864 aaKnown RBP5.62□□□□□ -1.51
CDC43YGL155W TMA22P47089 198 aaPredicted RBP5.62□□□□□ -1.51
CDC43YGL155W NNF2P53253 936 aa5.62□□□□□ -1.51
CDC43YGL155W YPL109CQ02981 657 aa5.62□□□□□ -1.51
CDC43YGL155W PRP3Q03338 469 aaPredicted RBP5.62□□□□□ -1.51
CDC43YGL155W GTB1Q04924 702 aa5.62□□□□□ -1.51
CDC43YGL155W DUS3Q06053 668 aaKnown RBP5.62□□□□□ -1.51
CDC43YGL155W UBX5Q06682 500 aa5.62□□□□□ -1.51
CDC43YGL155W IES4Q08561 116 aa5.62□□□□□ -1.51
CDC43YGL155W GPN2Q08726 347 aaPredicted RBP5.62□□□□□ -1.51
CDC43YGL155W GIS3Q12418 502 aa5.62□□□□□ -1.51
CDC43YGL155W RRD2Q12461 358 aa5.62□□□□□ -1.51
CDC43YGL155W CSR2Q12734 1121 aa5.62□□□□□ -1.51
CDC43YGL155W AI5_BETAQ9ZZX0 354 aa5.62□□□□□ -1.51
CDC43YGL155W CDC19P00549 500 aaKnown RBP5.61□□□□□ -1.51
CDC43YGL155W FBP1P09201 348 aa5.61□□□□□ -1.51
CDC43YGL155W DAT1P13483 248 aaKnown RBP5.61□□□□□ -1.51
CDC43YGL155W CDC42P19073 191 aa5.61□□□□□ -1.51
CDC43YGL155W PWP1P21304 576 aaKnown RBP5.61□□□□□ -1.51
CDC43YGL155W BAS1P22035 811 aa5.61□□□□□ -1.51
CDC43YGL155W MGT1P26188 188 aa5.61□□□□□ -1.51
CDC43YGL155W HEM3P28789 327 aa5.61□□□□□ -1.51
CDC43YGL155W PCM1P38628 557 aaKnown RBP5.61□□□□□ -1.51
CDC43YGL155W APM2P38700 605 aa5.61□□□□□ -1.51
CDC43YGL155W MSR1P38714 643 aa5.61□□□□□ -1.51
CDC43YGL155W LIN1P38852 340 aaPredicted RBP5.61□□□□□ -1.51
CDC43YGL155W YEL025CP39991 1188 aa5.61□□□□□ -1.51
CDC43YGL155W SIP5P40210 489 aaKnown RBP5.61□□□□□ -1.51
CDC43YGL155W FET4P40988 552 aa5.61□□□□□ -1.51
CDC43YGL155W DAS1P47005 663 aa5.61□□□□□ -1.51
CDC43YGL155W AVT1P47082 602 aa5.61□□□□□ -1.51
CDC43YGL155W LIA1P47120 325 aaKnown RBP5.61□□□□□ -1.51
CDC43YGL155W ASN1P49089 572 aaKnown RBP5.61□□□□□ -1.51
CDC43YGL155W YNL247WP53852 767 aaKnown RBP5.61□□□□□ -1.51
CDC43YGL155W YNL144CP53907 740 aa5.61□□□□□ -1.51
CDC43YGL155W PPM1Q04081 328 aa5.61□□□□□ -1.51
CDC43YGL155W YLR346CQ06139 101 aa5.61□□□□□ -1.51
CDC43YGL155W YLR177WQ06251 628 aa5.61□□□□□ -1.51
CDC43YGL155W GNT1Q12096 491 aa5.61□□□□□ -1.51
CDC43YGL155W ILS1P09436 1072 aaKnown RBP5.6□□□□□ -1.51
CDC43YGL155W VMA2P16140 517 aaKnown RBP5.6□□□□□ -1.51
CDC43YGL155W MRPS28P21771 286 aa5.6□□□□□ -1.51
CDC43YGL155W TRX1P22217 103 aaKnown RBP5.6□□□□□ -1.51
CDC43YGL155W TKL1P23254 680 aaKnown RBP5.6□□□□□ -1.51
CDC43YGL155W VAN1P23642 535 aa5.6□□□□□ -1.51
CDC43YGL155W SEC14P24280 304 aaKnown RBP5.6□□□□□ -1.51
CDC43YGL155W RPC19P28000 142 aaKnown RBP5.6□□□□□ -1.51
CDC43YGL155W GPI10P30777 616 aa5.6□□□□□ -1.51
CDC43YGL155W GYP6P32806 458 aa5.6□□□□□ -1.51
CDC43YGL155W CBF5P33322 483 aaKnown RBP RIP-Chip data5.6□□□□□ -1.51not detected
CDC43YGL155W DUG2P38149 878 aa5.6□□□□□ -1.51
CDC43YGL155W REG2P38232 338 aa5.6□□□□□ -1.51
CDC43YGL155W GPB2P39717 880 aa5.6□□□□□ -1.51
CDC43YGL155W EAF5P39995 279 aa5.6□□□□□ -1.51
CDC43YGL155W TMN3P40071 706 aa5.6□□□□□ -1.51
CDC43YGL155W ARG2P40360 574 aa5.6□□□□□ -1.51
CDC43YGL155W TMA108P40462 946 aa5.6□□□□□ -1.51
CDC43YGL155W KTR7P40504 517 aa5.6□□□□□ -1.51
CDC43YGL155W YIL001WP40560 513 aa5.6□□□□□ -1.51
CDC43YGL155W MDJ2P42834 146 aa5.6□□□□□ -1.51
CDC43YGL155W SAE2P46946 345 aa5.6□□□□□ -1.51
CDC43YGL155W PCL10P53124 433 aa5.6□□□□□ -1.51
CDC43YGL155W YGL039WP53183 348 aaKnown RBP5.6□□□□□ -1.51
CDC43YGL155W SCW11P53189 542 aa5.6□□□□□ -1.51
CDC43YGL155W CUL3P53202 744 aa5.6□□□□□ -1.51
CDC43YGL155W LSC1P53598 329 aaKnown RBP5.6□□□□□ -1.51
CDC43YGL155W HFD1Q04458 532 aa5.6□□□□□ -1.51
CDC43YGL155W YDR278CQ05612 105 aa5.6□□□□□ -1.51
CDC43YGL155W COQ9Q05779 260 aa5.6□□□□□ -1.51
CDC43YGL155W THI7Q05998 598 aa5.6□□□□□ -1.51
CDC43YGL155W DUS4Q06063 367 aa5.6□□□□□ -1.51
CDC43YGL155W TDA5Q06417 326 aaKnown RBP5.6□□□□□ -1.51
CDC43YGL155W FAP7Q12055 197 aaPredicted RBP5.6□□□□□ -1.51
CDC43YGL155W YDR018CQ12185 396 aa5.6□□□□□ -1.51
CDC43YGL155W YPT6Q99260 215 aa5.6□□□□□ -1.51
CDC43YGL155W BI2P03873 423 aa5.59□□□□□ -1.51
CDC43YGL155W BI4P03879 638 aa5.59□□□□□ -1.51
CDC43YGL155W DED1P06634 604 aaKnown RBP5.59□□□□□ -1.51
CDC43YGL155W RAD3P06839 778 aa5.59□□□□□ -1.51
CDC43YGL155W GCD2P12754 651 aaPredicted RBP5.59□□□□□ -1.51
CDC43YGL155W IME1P21190 360 aa5.59□□□□□ -1.51
CDC43YGL155W CLB4P24871 460 aa5.59□□□□□ -1.51
CDC43YGL155W TPS2P31688 896 aaKnown RBP5.59□□□□□ -1.51
CDC43YGL155W SIN4P32259 974 aa5.59□□□□□ -1.51
CDC43YGL155W DPH2P32461 534 aa5.59□□□□□ -1.51
CDC43YGL155W EFB1P32471 206 aaKnown RBP5.59□□□□□ -1.51
CDC43YGL155W ZUO1P32527 433 aaKnown RBP5.59□□□□□ -1.51
CDC43YGL155W TFC3P34111 1160 aa5.59□□□□□ -1.51
CDC43YGL155W SHP1P34223 423 aa5.59□□□□□ -1.51
CDC43YGL155W COY1P34237 679 aa5.59□□□□□ -1.51
CDC43YGL155W YBR032WP38223 100 aa5.59□□□□□ -1.51
CDC43YGL155W MMS4P38257 691 aa5.59□□□□□ -1.51
CDC43YGL155W SSN3P39073 555 aa5.59□□□□□ -1.51
CDC43YGL155W DLD3P39976 496 aaKnown RBP5.59□□□□□ -1.51
CDC43YGL155W ALA1P40825 983 aaKnown RBP5.59□□□□□ -1.51
CDC43YGL155W ORC5P50874 479 aa5.59□□□□□ -1.51
CDC43YGL155W RTA1P53047 317 aa5.59□□□□□ -1.51
CDC43YGL155W ERP6P53198 216 aa5.59□□□□□ -1.51
CDC43YGL155W YGR125WP53273 1036 aa5.59□□□□□ -1.51
CDC43YGL155W YNL146WP53906 100 aa5.59□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms