RNA–Protein interactions for RNA: YER038C

KRE29, Transcript of Subunit of the SMC5-SMC6 complex, yeast

Gene KRE29, Length 1,395 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
KRE29	YER038C	CTR1	P49573	406 aa		4.64	□□□□□ -1.67
KRE29	YER038C	DAK1	P54838	584 aa	Known RBP	4.64	□□□□□ -1.67
KRE29	YER038C	YVH1	Q02256	364 aa	Known RBP	4.64	□□□□□ -1.67
KRE29	YER038C	TY1B-A	O13527	1196 aa	Known RBP	4.63	□□□□□ -1.67
KRE29	YER038C	RPL8A	P17076	256 aa	Known RBP	4.63	□□□□□ -1.67
KRE29	YER038C	RNR3	P21672	869 aa	Known RBP	4.63	□□□□□ -1.67
KRE29	YER038C	SED4	P25365	1065 aa		4.63	□□□□□ -1.67
KRE29	YER038C	TIM23	P32897	222 aa		4.63	□□□□□ -1.67
KRE29	YER038C	MPE1	P35728	441 aa	Known RBP	4.63	□□□□□ -1.67
KRE29	YER038C	VBA5	P36172	582 aa		4.63	□□□□□ -1.67
KRE29	YER038C	MOH1	P38191	138 aa		4.63	□□□□□ -1.67
KRE29	YER038C	SUL1	P38359	859 aa		4.63	□□□□□ -1.67
KRE29	YER038C	TPM2	P40414	161 aa		4.63	□□□□□ -1.67
KRE29	YER038C	ASE1	P50275	885 aa		4.63	□□□□□ -1.67
KRE29	YER038C	SFB2	P53953	876 aa		4.63	□□□□□ -1.67
KRE29	YER038C	PTA1	Q01329	785 aa	Predicted RBP	4.63	□□□□□ -1.67
KRE29	YER038C	SHE9	Q04172	456 aa		4.63	□□□□□ -1.67
KRE29	YER038C	JIP5	Q06214	492 aa	Predicted RBP	4.63	□□□□□ -1.67
KRE29	YER038C	VIP1	Q06685	1146 aa	Known RBP	4.63	□□□□□ -1.67
KRE29	YER038C	OPI10	Q08202	246 aa		4.63	□□□□□ -1.67
KRE29	YER038C	PSK2	Q08217	1101 aa		4.63	□□□□□ -1.67
KRE29	YER038C	RTP1	Q12751	981 aa		4.63	□□□□□ -1.67
KRE29	YER038C	YDR524C-B	Q3E6R4	66 aa		4.63	□□□□□ -1.67
KRE29	YER038C	HEM1	P09950	548 aa	Predicted RBP	4.62	□□□□□ -1.67
KRE29	YER038C	KAR4	P25583	335 aa		4.62	□□□□□ -1.67
KRE29	YER038C	PWP2	P25635	923 aa	Known RBP	4.62	□□□□□ -1.67
KRE29	YER038C	KTR4	P38131	464 aa		4.62	□□□□□ -1.67
KRE29	YER038C	YER158C	P40095	573 aa		4.62	□□□□□ -1.67
KRE29	YER038C	RAI1	P53063	387 aa	Known RBP	4.62	□□□□□ -1.67
KRE29	YER038C	DOS2	P54858	310 aa		4.62	□□□□□ -1.67
KRE29	YER038C	MEH1	Q02205	184 aa		4.62	□□□□□ -1.67
KRE29	YER038C	YDR341C	Q05506	607 aa	Known RBP	4.62	□□□□□ -1.67
KRE29	YER038C	UBR2	Q07963	1872 aa		4.62	□□□□□ -1.67
KRE29	YER038C	FKS1	P38631	1876 aa	Known RBP	4.61	□□□□□ -1.67
KRE29	YER038C	CIT1	P00890	479 aa		4.61	□□□□□ -1.67
KRE29	YER038C	ADE8	P04161	214 aa		4.61	□□□□□ -1.67
KRE29	YER038C	MET6	P05694	767 aa	Known RBP	4.61	□□□□□ -1.67
KRE29	YER038C	HIP1	P06775	603 aa		4.61	□□□□□ -1.67
KRE29	YER038C	MAS2	P11914	482 aa		4.61	□□□□□ -1.67
KRE29	YER038C	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
KRE29	YER038C	YPT53	P36019	220 aa		4.61	□□□□□ -1.67
KRE29	YER038C	YKR078W	P36158	585 aa	Known RBP	4.61	□□□□□ -1.67
KRE29	YER038C	SPO22	P40511	975 aa		4.61	□□□□□ -1.67
KRE29	YER038C	VID28	P40547	921 aa		4.61	□□□□□ -1.67
KRE29	YER038C	RPS7B	P48164	190 aa	Known RBP	4.61	□□□□□ -1.67
KRE29	YER038C	PIL1	P53252	339 aa	Known RBP	4.61	□□□□□ -1.67
KRE29	YER038C	TIM44	Q01852	431 aa		4.61	□□□□□ -1.67
KRE29	YER038C	GIR2	Q03768	265 aa	Predicted RBP	4.61	□□□□□ -1.67
KRE29	YER038C	WHI4	Q07655	649 aa	Known RBP	4.61	□□□□□ -1.67
KRE29	YER038C	RNA1	P11745	407 aa	Known RBP	4.6	□□□□□ -1.67
KRE29	YER038C	PRI2	P20457	528 aa		4.6	□□□□□ -1.67
KRE29	YER038C	YKL069W	P36088	180 aa		4.6	□□□□□ -1.67
KRE29	YER038C	CCT3	P39077	534 aa	Known RBP	4.6	□□□□□ -1.67
KRE29	YER038C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
KRE29	YER038C	YOL073C	Q08232	322 aa		4.6	□□□□□ -1.67
KRE29	YER038C	ARP6	Q12509	438 aa		4.6	□□□□□ -1.67
KRE29	YER038C	SES1	P07284	462 aa	Known RBP	4.59	□□□□□ -1.67
KRE29	YER038C	SNA3	P14359	133 aa		4.59	□□□□□ -1.67
KRE29	YER038C	HCA4	P20448	770 aa	Known RBP	4.59	□□□□□ -1.67
KRE29	YER038C	SWI4	P25302	1093 aa	Known RBP	4.59	□□□□□ -1.67
KRE29	YER038C	CDC48	P25694	835 aa	Known RBP	4.59	□□□□□ -1.67
KRE29	YER038C	BMH2	P34730	273 aa	Known RBP	4.59	□□□□□ -1.67
KRE29	YER038C	UBP11	P36026	717 aa		4.59	□□□□□ -1.67
KRE29	YER038C	RXT2	P38255	430 aa		4.59	□□□□□ -1.67
KRE29	YER038C	PMC1	P38929	1173 aa	Predicted RBP	4.59	□□□□□ -1.67
KRE29	YER038C	HOS4	P40480	1083 aa		4.59	□□□□□ -1.67
KRE29	YER038C	PCI8	P40512	444 aa		4.59	□□□□□ -1.67
KRE29	YER038C	EPL1	P43572	832 aa		4.59	□□□□□ -1.67
KRE29	YER038C	STU2	P46675	888 aa		4.59	□□□□□ -1.67
KRE29	YER038C	ARP5	P53946	755 aa		4.59	□□□□□ -1.67
KRE29	YER038C	ORC4	P54791	529 aa		4.59	□□□□□ -1.67
KRE29	YER038C	SMD2	Q06217	110 aa	Known RBP	4.59	□□□□□ -1.67
KRE29	YER038C	AHC1	Q12433	566 aa		4.59	□□□□□ -1.67
KRE29	YER038C	ATG11	Q12527	1178 aa		4.59	□□□□□ -1.67
KRE29	YER038C	ERG4	P25340	473 aa		4.58	□□□□□ -1.68
KRE29	YER038C	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
KRE29	YER038C	AAR2	P32357	355 aa	Predicted RBP	4.58	□□□□□ -1.68
KRE29	YER038C	CDC11	P32458	415 aa		4.58	□□□□□ -1.68
KRE29	YER038C	TVP38	P36164	337 aa		4.58	□□□□□ -1.68
KRE29	YER038C	OPY1	P38271	328 aa		4.58	□□□□□ -1.68
KRE29	YER038C	TSL1	P38427	1098 aa	Known RBP	4.58	□□□□□ -1.68
KRE29	YER038C	HMF1	P40037	129 aa	Known RBP	4.58	□□□□□ -1.68
KRE29	YER038C	SGM1	P47166	707 aa		4.58	□□□□□ -1.68
KRE29	YER038C	YKE2	P52553	114 aa		4.58	□□□□□ -1.68
KRE29	YER038C	HUL5	P53119	910 aa		4.58	□□□□□ -1.68
KRE29	YER038C	YGL138C	P53122	345 aa		4.58	□□□□□ -1.68
KRE29	YER038C	YLR040C	Q07988	224 aa		4.58	□□□□□ -1.68
KRE29	YER038C	UPC2	Q12151	913 aa		4.58	□□□□□ -1.68
KRE29	YER038C	RIF1	P29539	1916 aa		4.58	□□□□□ -1.68
KRE29	YER038C	MATALPHA2	P0CY08	210 aa		4.57	□□□□□ -1.68
KRE29	YER038C	HMLALPHA2	P0CY09	210 aa		4.57	□□□□□ -1.68
KRE29	YER038C	KIN82	P25341	720 aa		4.57	□□□□□ -1.68
KRE29	YER038C	MRP8	P35719	219 aa		4.57	□□□□□ -1.68
KRE29	YER038C	RPN10	P38886	268 aa	Known RBP	4.57	□□□□□ -1.68
KRE29	YER038C	AZR1	P50080	613 aa		4.57	□□□□□ -1.68
KRE29	YER038C	RNT1	Q02555	471 aa		4.57	□□□□□ -1.68
KRE29	YER038C	YML122C	Q03207	126 aa		4.57	□□□□□ -1.68
KRE29	YER038C	MCH5	Q08777	521 aa		4.57	□□□□□ -1.68
KRE29	YER038C	LAS17	Q12446	633 aa		4.57	□□□□□ -1.68
KRE29	YER038C	TRP4	P07285	380 aa	Predicted RBP	4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 105.6 ms