RNA–Protein interactions for RNA: YDR288W

NSE3, Transcript of Component of the SMC5-SMC6 complex, yeast

Gene NSE3, Length 912 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NSE3	YDR288W	FHN1	P53279	174 aa		5.56	□□□□□ -1.52
NSE3	YDR288W	MTD1	Q02046	320 aa	Known RBP	5.56	□□□□□ -1.52
NSE3	YDR288W	NUR1	Q12066	484 aa		5.56	□□□□□ -1.52
NSE3	YDR288W	USV1	Q12132	391 aa		5.56	□□□□□ -1.52
NSE3	YDR288W	KCC4	P25389	1037 aa		5.55	□□□□□ -1.52
NSE3	YDR288W	SDS22	P36047	338 aa		5.55	□□□□□ -1.52
NSE3	YDR288W	STB4	P50104	949 aa		5.55	□□□□□ -1.52
NSE3	YDR288W	MET14	Q02196	202 aa		5.55	□□□□□ -1.52
NSE3	YDR288W	MUK1	Q02866	612 aa		5.55	□□□□□ -1.52
NSE3	YDR288W	FDC1	Q03034	503 aa		5.55	□□□□□ -1.52
NSE3	YDR288W	MCH5	Q08777	521 aa		5.55	□□□□□ -1.52
NSE3	YDR288W	MLH3	Q12083	715 aa		5.55	□□□□□ -1.52
NSE3	YDR288W	VPS5	Q92331	675 aa		5.55	□□□□□ -1.52
NSE3	YDR288W	HMG2	P12684	1045 aa		5.54	□□□□□ -1.52
NSE3	YDR288W	PHO3	P24031	467 aa		5.54	□□□□□ -1.52
NSE3	YDR288W	FUB1	P25659	250 aa		5.54	□□□□□ -1.52
NSE3	YDR288W	CRG1	P38892	291 aa	RIP-Chip data	5.54	□□□□□ -1.52	not detected
NSE3	YDR288W	TMN3	P40071	706 aa		5.54	□□□□□ -1.52
NSE3	YDR288W	FTR1	P40088	404 aa		5.54	□□□□□ -1.52
NSE3	YDR288W	ARG2	P40360	574 aa		5.54	□□□□□ -1.52
NSE3	YDR288W	TPM2	P40414	161 aa		5.54	□□□□□ -1.52
NSE3	YDR288W	ASK10	P48361	1146 aa		5.54	□□□□□ -1.52
NSE3	YDR288W	CTR1	P49573	406 aa		5.54	□□□□□ -1.52
NSE3	YDR288W	CTF4	Q01454	927 aa		5.54	□□□□□ -1.52
NSE3	YDR288W	YCG1	Q06680	1035 aa		5.54	□□□□□ -1.52
NSE3	YDR288W	YDL086W	Q07505	273 aa		5.54	□□□□□ -1.52
NSE3	YDR288W	PSF3	Q12146	194 aa		5.54	□□□□□ -1.52
NSE3	YDR288W	HOS1	Q12214	470 aa		5.54	□□□□□ -1.52
NSE3	YDR288W	THR1	P17423	357 aa	Known RBP	5.53	□□□□□ -1.52
NSE3	YDR288W	PTP2	P29461	750 aa		5.53	□□□□□ -1.52
NSE3	YDR288W	CTP1	P38152	299 aa		5.53	□□□□□ -1.52
NSE3	YDR288W	RIM4	P38741	713 aa		5.53	□□□□□ -1.52
NSE3	YDR288W	KHA1	P40309	873 aa		5.53	□□□□□ -1.52
NSE3	YDR288W	NDC80	P40460	691 aa		5.53	□□□□□ -1.52
NSE3	YDR288W	PEF1	P53238	335 aa		5.53	□□□□□ -1.52
NSE3	YDR288W	YGR151C	P53287	111 aa		5.53	□□□□□ -1.52
NSE3	YDR288W	CNM67	P53865	581 aa	Known RBP	5.53	□□□□□ -1.52
NSE3	YDR288W	ATG4	P53867	494 aa		5.53	□□□□□ -1.52
NSE3	YDR288W	MLC2	Q06580	163 aa		5.53	□□□□□ -1.52
NSE3	YDR288W	TUF1	P02992	437 aa	Known RBP	5.52	□□□□□ -1.53
NSE3	YDR288W	GAL1	P04385	528 aa		5.52	□□□□□ -1.53
NSE3	YDR288W	SEC12	P11655	471 aa		5.52	□□□□□ -1.53
NSE3	YDR288W	TUP1	P16649	713 aa		5.52	□□□□□ -1.53
NSE3	YDR288W	CWH43	P25618	953 aa		5.52	□□□□□ -1.53
NSE3	YDR288W	RMA1	P36001	430 aa	Known RBP	5.52	□□□□□ -1.53
NSE3	YDR288W	TAF5	P38129	798 aa		5.52	□□□□□ -1.53
NSE3	YDR288W	CHS7	P38843	316 aa		5.52	□□□□□ -1.53
NSE3	YDR288W	SSP120	P39931	234 aa	Known RBP	5.52	□□□□□ -1.53
NSE3	YDR288W	YEL025C	P39991	1188 aa		5.52	□□□□□ -1.53
NSE3	YDR288W	PIP2	P52960	996 aa		5.52	□□□□□ -1.53
NSE3	YDR288W	HLR1	Q04429	423 aa		5.52	□□□□□ -1.53
NSE3	YDR288W	YSH1	Q06224	779 aa	Predicted RBP	5.52	□□□□□ -1.53
NSE3	YDR288W	CDC43	P18898	376 aa		5.51	□□□□□ -1.53
NSE3	YDR288W	HOP1	P20050	605 aa		5.51	□□□□□ -1.53
NSE3	YDR288W	TGL1	P34163	548 aa		5.51	□□□□□ -1.53
NSE3	YDR288W	APL3	P38065	1025 aa		5.51	□□□□□ -1.53
NSE3	YDR288W	CDS1	P38221	457 aa		5.51	□□□□□ -1.53
NSE3	YDR288W	PPE1	P38796	400 aa		5.51	□□□□□ -1.53
NSE3	YDR288W	TAH11	P47112	604 aa		5.51	□□□□□ -1.53
NSE3	YDR288W	UBA2	P52488	636 aa		5.51	□□□□□ -1.53
NSE3	YDR288W	SMX3	P54999	86 aa	Predicted RBP	5.51	□□□□□ -1.53
NSE3	YDR288W	TIM50	Q02776	476 aa		5.51	□□□□□ -1.53
NSE3	YDR288W	MTC7	P32633	139 aa		5.5	□□□□□ -1.53
NSE3	YDR288W	OAR1	P35731	278 aa		5.5	□□□□□ -1.53
NSE3	YDR288W	GLG1	P36143	616 aa		5.5	□□□□□ -1.53
NSE3	YDR288W	YHR097C	P38809	366 aa	Known RBP	5.5	□□□□□ -1.53
NSE3	YDR288W	SCS2	P40075	244 aa	Known RBP	5.5	□□□□□ -1.53
NSE3	YDR288W	HIS6	P40545	261 aa		5.5	□□□□□ -1.53
NSE3	YDR288W	MNT2	P53059	558 aa		5.5	□□□□□ -1.53
NSE3	YDR288W	CEF1	Q03654	590 aa	Predicted RBP	5.5	□□□□□ -1.53
NSE3	YDR288W	KIN3	P22209	435 aa		5.49	□□□□□ -1.53
NSE3	YDR288W	PET309	P32522	965 aa	Predicted RBP	5.49	□□□□□ -1.53
NSE3	YDR288W	ELF1	P36053	145 aa		5.49	□□□□□ -1.53
NSE3	YDR288W	SET3	P36124	751 aa		5.49	□□□□□ -1.53
NSE3	YDR288W	MOH1	P38191	138 aa		5.49	□□□□□ -1.53
NSE3	YDR288W	EHT1	P38295	451 aa		5.49	□□□□□ -1.53
NSE3	YDR288W	KSP1	P38691	1029 aa	Known RBP	5.49	□□□□□ -1.53
NSE3	YDR288W	THI6	P41835	540 aa		5.49	□□□□□ -1.53
NSE3	YDR288W	NMA2	P53204	395 aa		5.49	□□□□□ -1.53
NSE3	YDR288W	DIP5	P53388	608 aa		5.49	□□□□□ -1.53
NSE3	YDR288W	SPC98	P53540	846 aa		5.49	□□□□□ -1.53
NSE3	YDR288W	IZH3	Q07959	543 aa		5.49	□□□□□ -1.53
NSE3	YDR288W	RTK1	Q12100	620 aa	Predicted RBP	5.49	□□□□□ -1.53
NSE3	YDR288W	YOL114C	Q12322	202 aa		5.49	□□□□□ -1.53
NSE3	YDR288W	VAS1	P07806	1104 aa	Known RBP	5.48	□□□□□ -1.53
NSE3	YDR288W	PCK1	P10963	549 aa		5.48	□□□□□ -1.53
NSE3	YDR288W	CBP3	P21560	335 aa		5.48	□□□□□ -1.53
NSE3	YDR288W	MSS1	P32559	526 aa	Predicted RBP	5.48	□□□□□ -1.53
NSE3	YDR288W	YGR054W	P53235	642 aa	Known RBP	5.48	□□□□□ -1.53
NSE3	YDR288W	DHR2	P36009	735 aa	Predicted RBP	5.47	□□□□□ -1.53
NSE3	YDR288W	GMH1	P36125	273 aa		5.47	□□□□□ -1.53
NSE3	YDR288W	YJL206C	P39529	758 aa		5.47	□□□□□ -1.53
NSE3	YDR288W	MAD2	P40958	196 aa		5.47	□□□□□ -1.53
NSE3	YDR288W	ATG36	P46983	293 aa		5.47	□□□□□ -1.53
NSE3	YDR288W	SLI1	P53304	468 aa		5.47	□□□□□ -1.53
NSE3	YDR288W	RRP6	Q12149	733 aa	Known RBP	5.47	□□□□□ -1.53
NSE3	YDR288W	URA3	P03962	267 aa		5.46	□□□□□ -1.54
NSE3	YDR288W	DMC1	P25453	334 aa		5.46	□□□□□ -1.54
NSE3	YDR288W	YJL193W	P39542	402 aa		5.46	□□□□□ -1.54
NSE3	YDR288W	VPS27	P40343	622 aa	Known RBP	5.46	□□□□□ -1.54

Retrieved 100 of 5,963 RNA–protein pairs in 38.7 ms