RNA–Protein interactions for RNA: YDL225W

SHS1, Transcript of Component of the septin ring that is required for cytokinesis, yeastyeast

Gene SHS1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHS1YDL225W MOH1P38191 138 aa3.59□□□□□ -1.83
SHS1YDL225W MCH5Q08777 521 aa3.59□□□□□ -1.83
SHS1YDL225W SST2P11972 698 aaKnown RBP3.59□□□□□ -1.84
SHS1YDL225W OAR1P35731 278 aa3.59□□□□□ -1.84
SHS1YDL225W CTP1P38152 299 aa3.59□□□□□ -1.84
SHS1YDL225W YHR097CP38809 366 aaKnown RBP3.59□□□□□ -1.84
SHS1YDL225W STL1P39932 569 aa3.59□□□□□ -1.84
SHS1YDL225W TMN3P40071 706 aa3.59□□□□□ -1.84
SHS1YDL225W YIL092WP40497 633 aa3.59□□□□□ -1.84
SHS1YDL225W CTR1P49573 406 aa3.59□□□□□ -1.84
SHS1YDL225W ATG4P53867 494 aa3.59□□□□□ -1.84
SHS1YDL225W MTD1Q02046 320 aaKnown RBP3.59□□□□□ -1.84
SHS1YDL225W FDC1Q03034 503 aa3.59□□□□□ -1.84
SHS1YDL225W HBT1Q07653 1046 aaKnown RBP3.59□□□□□ -1.84
SHS1YDL225W FUB1P25659 250 aa3.58□□□□□ -1.84
SHS1YDL225W NTH1P32356 751 aa3.58□□□□□ -1.84
SHS1YDL225W SET3P36124 751 aa3.58□□□□□ -1.84
SHS1YDL225W UBS1P38290 277 aa3.58□□□□□ -1.84
SHS1YDL225W NDC80P40460 691 aa3.58□□□□□ -1.84
SHS1YDL225W NOP2P40991 618 aaKnown RBP3.58□□□□□ -1.84
SHS1YDL225W YDL183CP48569 320 aa3.58□□□□□ -1.84
SHS1YDL225W PEF1P53238 335 aa3.58□□□□□ -1.84
SHS1YDL225W YGR151CP53287 111 aa3.58□□□□□ -1.84
SHS1YDL225W SQS1P53866 767 aaKnown RBP3.58□□□□□ -1.84
SHS1YDL225W SMX3P54999 86 aaPredicted RBP3.58□□□□□ -1.84
SHS1YDL225W TIM50Q02776 476 aa3.58□□□□□ -1.84
SHS1YDL225W YCG1Q06680 1035 aa3.58□□□□□ -1.84
SHS1YDL225W YDL086WQ07505 273 aa3.58□□□□□ -1.84
SHS1YDL225W AIM41Q12032 185 aa3.58□□□□□ -1.84
SHS1YDL225W ATP4P05626 244 aa3.57□□□□□ -1.84
SHS1YDL225W HMG2P12684 1045 aa3.57□□□□□ -1.84
SHS1YDL225W ABF1P14164 731 aa3.57□□□□□ -1.84
SHS1YDL225W TUP1P16649 713 aa3.57□□□□□ -1.84
SHS1YDL225W HOP1P20050 605 aa3.57□□□□□ -1.84
SHS1YDL225W EHT1P38295 451 aa3.57□□□□□ -1.84
SHS1YDL225W ARG2P40360 574 aa3.57□□□□□ -1.84
SHS1YDL225W IZH3Q07959 543 aa3.57□□□□□ -1.84
SHS1YDL225W RTK1Q12100 620 aaPredicted RBP3.57□□□□□ -1.84
SHS1YDL225W NYV1Q12255 253 aa3.57□□□□□ -1.84
SHS1YDL225W GAL1P04385 528 aa3.56□□□□□ -1.84
SHS1YDL225W KCC4P25389 1037 aa3.56□□□□□ -1.84
SHS1YDL225W CWH43P25618 953 aa3.56□□□□□ -1.84
SHS1YDL225W GLG1P36143 616 aa3.56□□□□□ -1.84
SHS1YDL225W KSP1P38691 1029 aaKnown RBP3.56□□□□□ -1.84
SHS1YDL225W SDS3P40505 327 aa3.56□□□□□ -1.84
SHS1YDL225W MAD2P40958 196 aa3.56□□□□□ -1.84
SHS1YDL225W STU2P46675 888 aa3.56□□□□□ -1.84
SHS1YDL225W MNT2P53059 558 aa3.56□□□□□ -1.84
SHS1YDL225W NMA2P53204 395 aa3.56□□□□□ -1.84
SHS1YDL225W DIP5P53388 608 aa3.56□□□□□ -1.84
SHS1YDL225W CNM67P53865 581 aaKnown RBP3.56□□□□□ -1.84
SHS1YDL225W MET14Q02196 202 aa3.56□□□□□ -1.84
SHS1YDL225W HLR1Q04429 423 aa3.56□□□□□ -1.84
SHS1YDL225W TMN2Q04562 672 aa3.56□□□□□ -1.84
SHS1YDL225W NUR1Q12066 484 aa3.56□□□□□ -1.84
SHS1YDL225W VPS5Q92331 675 aa3.56□□□□□ -1.84
SHS1YDL225W TUF1P02992 437 aaKnown RBP3.55□□□□□ -1.84
SHS1YDL225W PHO3P24031 467 aa3.55□□□□□ -1.84
SHS1YDL225W ELF1P36053 145 aa3.55□□□□□ -1.84
SHS1YDL225W YKL133CP36066 463 aa3.55□□□□□ -1.84
SHS1YDL225W ATG36P46983 293 aa3.55□□□□□ -1.84
SHS1YDL225W TAH11P47112 604 aa3.55□□□□□ -1.84
SHS1YDL225W ASK10P48361 1146 aa3.55□□□□□ -1.84
SHS1YDL225W MDR1P53258 950 aa3.55□□□□□ -1.84
SHS1YDL225W GND2P53319 492 aa3.55□□□□□ -1.84
SHS1YDL225W DIN7Q12086 430 aa3.55□□□□□ -1.84
SHS1YDL225W MTH1P35198 433 aa3.55□□□□□ -1.84
SHS1YDL225W APL3P38065 1025 aa3.55□□□□□ -1.84
SHS1YDL225W PPE1P38796 400 aa3.55□□□□□ -1.84
SHS1YDL225W SSP120P39931 234 aaKnown RBP3.55□□□□□ -1.84
SHS1YDL225W YEL025CP39991 1188 aa3.55□□□□□ -1.84
SHS1YDL225W SCS2P40075 244 aaKnown RBP3.55□□□□□ -1.84
SHS1YDL225W PIP2P52960 996 aa3.55□□□□□ -1.84
SHS1YDL225W YGR054WP53235 642 aaKnown RBP3.55□□□□□ -1.84
SHS1YDL225W CEG1Q01159 459 aaPredicted RBP3.55□□□□□ -1.84
SHS1YDL225W YSH1Q06224 779 aaPredicted RBP3.55□□□□□ -1.84
SHS1YDL225W ARR3Q06598 404 aa3.55□□□□□ -1.84
SHS1YDL225W MRH1Q12117 320 aaPredicted RBP3.55□□□□□ -1.84
SHS1YDL225W HOS1Q12214 470 aa3.55□□□□□ -1.84
SHS1YDL225W KIN3P22209 435 aa3.54□□□□□ -1.84
SHS1YDL225W PTP2P29461 750 aa3.54□□□□□ -1.84
SHS1YDL225W PET309P32522 965 aaPredicted RBP3.54□□□□□ -1.84
SHS1YDL225W TGL1P34163 548 aa3.54□□□□□ -1.84
SHS1YDL225W SDS22P36047 338 aa3.54□□□□□ -1.84
SHS1YDL225W GMH1P36125 273 aa3.54□□□□□ -1.84
SHS1YDL225W YJL206CP39529 758 aa3.54□□□□□ -1.84
SHS1YDL225W SAW1P39735 261 aa3.54□□□□□ -1.84
SHS1YDL225W HIS6P40545 261 aa3.54□□□□□ -1.84
SHS1YDL225W YNR071CP53757 342 aa3.54□□□□□ -1.84
SHS1YDL225W EFR3Q03653 782 aaKnown RBP3.54□□□□□ -1.84
SHS1YDL225W PSF3Q12146 194 aa3.54□□□□□ -1.84
SHS1YDL225W VAS1P07806 1104 aaKnown RBP3.53□□□□□ -1.84
SHS1YDL225W ADH4P10127 382 aa3.53□□□□□ -1.84
SHS1YDL225W YEF3P16521 1044 aaKnown RBP3.53□□□□□ -1.84
SHS1YDL225W CDC43P18898 376 aa3.53□□□□□ -1.84
SHS1YDL225W ARG1P22768 420 aa3.53□□□□□ -1.84
SHS1YDL225W LRO1P40345 661 aa3.53□□□□□ -1.84
SHS1YDL225W TPM2P40414 161 aa3.53□□□□□ -1.84
SHS1YDL225W CCT7P42943 550 aaKnown RBP3.53□□□□□ -1.84
SHS1YDL225W PUS4P48567 403 aaKnown RBP3.53□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms