RNA–Protein interactions for RNA: YDL112W

TRM3, Transcript of 2'-O-ribose methyltransferase, yeastyeast

Gene TRM3, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM3YDL112W MRPL7P36519 292 aa1.94□□□□□ -2.1
TRM3YDL112W REG2P38232 338 aa1.94□□□□□ -2.1
TRM3YDL112W YEL025CP39991 1188 aa1.94□□□□□ -2.1
TRM3YDL112W OPT1P40897 799 aa1.94□□□□□ -2.1
TRM3YDL112W UTP8P53276 713 aaKnown RBP1.94□□□□□ -2.1
TRM3YDL112W RSC3Q06639 885 aa1.94□□□□□ -2.1
TRM3YDL112W HFI1Q12060 488 aa1.94□□□□□ -2.1
TRM3YDL112W SPE3Q12074 293 aaKnown RBP1.94□□□□□ -2.1
TRM3YDL112W SAM1P10659 382 aaKnown RBP1.94□□□□□ -2.1
TRM3YDL112W MSS51P32335 436 aa1.94□□□□□ -2.1
TRM3YDL112W OPY1P38271 328 aa1.94□□□□□ -2.1
TRM3YDL112W FPR3P38911 411 aaKnown RBP1.94□□□□□ -2.1
TRM3YDL112W PIK1P39104 1066 aa1.94□□□□□ -2.1
TRM3YDL112W MTR3P48240 250 aaPredicted RBP1.94□□□□□ -2.1
TRM3YDL112W SCS3P53012 380 aa1.94□□□□□ -2.1
TRM3YDL112W YGR012WP53206 393 aa1.94□□□□□ -2.1
TRM3YDL112W SHE9Q04172 456 aa1.94□□□□□ -2.1
TRM3YDL112W PHM6Q05637 104 aa1.94□□□□□ -2.1
TRM3YDL112W RNR3P21672 869 aaKnown RBP1.93□□□□□ -2.1
TRM3YDL112W RNQ1P25367 405 aa1.93□□□□□ -2.1
TRM3YDL112W CDC48P25694 835 aaKnown RBP1.93□□□□□ -2.1
TRM3YDL112W CYS3P31373 394 aaKnown RBP1.93□□□□□ -2.1
TRM3YDL112W TOD6P34219 525 aa1.93□□□□□ -2.1
TRM3YDL112W LRG1P35688 1017 aa1.93□□□□□ -2.1
TRM3YDL112W RRP8P38961 392 aaKnown RBP1.93□□□□□ -2.1
TRM3YDL112W UBP6P43593 499 aaKnown RBP1.93□□□□□ -2.1
TRM3YDL112W CNM67P53865 581 aaKnown RBP1.93□□□□□ -2.1
TRM3YDL112W LCD1Q04377 747 aa1.93□□□□□ -2.1
TRM3YDL112W MBR1P23493 339 aa1.93□□□□□ -2.1
TRM3YDL112W PRO3P32263 286 aaKnown RBP1.93□□□□□ -2.1
TRM3YDL112W HBS1P32769 611 aaKnown RBP1.93□□□□□ -2.1
TRM3YDL112W SLA2P33338 968 aa1.93□□□□□ -2.1
TRM3YDL112W FLR1P38124 548 aa1.93□□□□□ -2.1
TRM3YDL112W TVP23P38962 199 aa1.93□□□□□ -2.1
TRM3YDL112W ATG11Q12527 1178 aa1.93□□□□□ -2.1
TRM3YDL112W YPR117WQ06116 2489 aa1.93□□□□□ -2.1
TRM3YDL112W PGK1P00560 416 aaKnown RBP1.93□□□□□ -2.1
TRM3YDL112W TAF13P11747 167 aa1.93□□□□□ -2.1
TRM3YDL112W ADE2P21264 571 aaKnown RBP1.93□□□□□ -2.1
TRM3YDL112W RIT1P23796 513 aa1.93□□□□□ -2.1
TRM3YDL112W EFT1P32324 842 aaKnown RBP1.93□□□□□ -2.1
TRM3YDL112W PEX7P39108 375 aa1.93□□□□□ -2.1
TRM3YDL112W YMR147WP40218 223 aaKnown RBP1.93□□□□□ -2.1
TRM3YDL112W SPO22P40511 975 aa1.93□□□□□ -2.1
TRM3YDL112W RAI1P53063 387 aaKnown RBP1.93□□□□□ -2.1
TRM3YDL112W YLR455WQ06188 304 aa1.93□□□□□ -2.1
TRM3YDL112W SGO1Q08490 590 aa1.93□□□□□ -2.1
TRM3YDL112W MPH2P0CD99 609 aa1.93□□□□□ -2.1
TRM3YDL112W MAS2P11914 482 aa1.93□□□□□ -2.1
TRM3YDL112W SAM35P14693 329 aa1.93□□□□□ -2.1
TRM3YDL112W SED4P25365 1065 aa1.93□□□□□ -2.1
TRM3YDL112W URK1P27515 501 aa1.93□□□□□ -2.1
TRM3YDL112W URA1P28272 314 aaPredicted RBP1.93□□□□□ -2.1
TRM3YDL112W YKL151CP36059 337 aa1.93□□□□□ -2.1
TRM3YDL112W GIC1P38785 314 aa1.93□□□□□ -2.1
TRM3YDL112W SGM1P47166 707 aa1.93□□□□□ -2.1
TRM3YDL112W FMS1P50264 508 aa1.93□□□□□ -2.1
TRM3YDL112W YGL039WP53183 348 aaKnown RBP1.93□□□□□ -2.1
TRM3YDL112W YAP6Q03935 383 aa1.93□□□□□ -2.1
TRM3YDL112W YOR059CQ08448 450 aaKnown RBP1.93□□□□□ -2.1
TRM3YDL112W CHO2P05374 869 aaKnown RBP1.92□□□□□ -2.1
TRM3YDL112W HIP1P06775 603 aa1.92□□□□□ -2.1
TRM3YDL112W DPH2P32461 534 aa1.92□□□□□ -2.1
TRM3YDL112W PRS1P32895 427 aaKnown RBP1.92□□□□□ -2.1
TRM3YDL112W PIB2P53191 635 aa1.92□□□□□ -2.1
TRM3YDL112W YHM2Q04013 314 aa1.92□□□□□ -2.1
TRM3YDL112W DFG16Q99234 619 aa1.92□□□□□ -2.1
TRM3YDL112W SNF5P18480 905 aa1.92□□□□□ -2.1
TRM3YDL112W HIS7P33734 552 aaKnown RBP1.92□□□□□ -2.1
TRM3YDL112W RFC1P38630 861 aaKnown RBP1.92□□□□□ -2.1
TRM3YDL112W PZF1P39933 429 aa1.92□□□□□ -2.1
TRM3YDL112W SSY5P47002 699 aa1.92□□□□□ -2.1
TRM3YDL112W CCM1P48237 864 aaPredicted RBP1.92□□□□□ -2.1
TRM3YDL112W ZPR1P53303 486 aaKnown RBP1.92□□□□□ -2.1
TRM3YDL112W YLL058WQ12198 575 aa1.92□□□□□ -2.1
TRM3YDL112W HIF1Q12373 385 aa1.92□□□□□ -2.1
TRM3YDL112W TOM1Q03280 3268 aa1.92□□□□□ -2.1
TRM3YDL112W RPL8AP17076 256 aaKnown RBP1.92□□□□□ -2.1
TRM3YDL112W CDC12P32468 407 aaKnown RBP1.92□□□□□ -2.1
TRM3YDL112W SHP1P34223 423 aa1.92□□□□□ -2.1
TRM3YDL112W AAP1P37898 856 aaKnown RBP1.92□□□□□ -2.1
TRM3YDL112W SET5P38890 526 aaKnown RBP1.92□□□□□ -2.1
TRM3YDL112W FKH2P41813 862 aa1.92□□□□□ -2.1
TRM3YDL112W GUS1P46655 708 aaKnown RBP RIP-Chip data1.92□□□□□ -2.1not detected
TRM3YDL112W YGR237CP50089 785 aa1.92□□□□□ -2.1
TRM3YDL112W INP52P50942 1183 aa1.92□□□□□ -2.1
TRM3YDL112W FUS2Q05670 677 aa1.92□□□□□ -2.1
TRM3YDL112W PIG1Q06216 648 aa1.92□□□□□ -2.1
TRM3YDL112W TFC6Q06339 672 aa1.92□□□□□ -2.1
TRM3YDL112W CUR1Q06469 252 aa1.92□□□□□ -2.1
TRM3YDL112W RIM20Q12033 661 aa1.92□□□□□ -2.1
TRM3YDL112W LAA1P39526 2014 aa1.91□□□□□ -2.1
TRM3YDL112W HCA4P20448 770 aaKnown RBP1.91□□□□□ -2.1
TRM3YDL112W BAP2P38084 609 aa1.91□□□□□ -2.1
TRM3YDL112W APN2P38207 520 aa1.91□□□□□ -2.1
TRM3YDL112W TDA3P38758 523 aa1.91□□□□□ -2.1
TRM3YDL112W YHR202WP38887 602 aa1.91□□□□□ -2.1
TRM3YDL112W FMP10P40098 244 aa1.91□□□□□ -2.1
TRM3YDL112W SEC26P41810 973 aaKnown RBP1.91□□□□□ -2.1
TRM3YDL112W GPD2P41911 440 aaKnown RBP1.91□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 47.4 ms