RNA–Protein interactions for RNA: YDL074C

BRE1, Transcript of E3 ubiquitin ligase, yeastyeast

Gene BRE1, Length 2,103 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRE1YDL074C TAF6P53040 516 aa2.2□□□□□ -2.06
BRE1YDL074C NOG2P53742 486 aaKnown RBP2.2□□□□□ -2.06
BRE1YDL074C SNZ2P53824 298 aa2.2□□□□□ -2.06
BRE1YDL074C GPD1Q00055 391 aaKnown RBP2.2□□□□□ -2.06
BRE1YDL074C DIG1Q03063 452 aaKnown RBP2.2□□□□□ -2.06
BRE1YDL074C VPS16Q03308 798 aa2.2□□□□□ -2.06
BRE1YDL074C TIF35Q04067 274 aaKnown RBP2.2□□□□□ -2.06
BRE1YDL074C UFO1Q04511 668 aa2.2□□□□□ -2.06
BRE1YDL074C FAR8Q05040 523 aa2.2□□□□□ -2.06
BRE1YDL074C KAP95Q06142 861 aaKnown RBP2.2□□□□□ -2.06
BRE1YDL074C SFH1Q06168 426 aa2.2□□□□□ -2.06
BRE1YDL074C YLR455WQ06188 304 aa2.2□□□□□ -2.06
BRE1YDL074C PIG1Q06216 648 aa2.2□□□□□ -2.06
BRE1YDL074C AIM39Q08223 395 aa2.2□□□□□ -2.06
BRE1YDL074C SPE3Q12074 293 aaKnown RBP2.2□□□□□ -2.06
BRE1YDL074C MOD5P07884 428 aa2.19□□□□□ -2.06
BRE1YDL074C HVG1P0CE11 249 aa2.19□□□□□ -2.06
BRE1YDL074C YMR085WP0CF18 432 aa2.19□□□□□ -2.06
BRE1YDL074C GPA2P10823 449 aa2.19□□□□□ -2.06
BRE1YDL074C PRP16P15938 1071 aaPredicted RBP2.19□□□□□ -2.06
BRE1YDL074C CDC42P19073 191 aa2.19□□□□□ -2.06
BRE1YDL074C KGD2P19262 463 aaPredicted RBP2.19□□□□□ -2.06
BRE1YDL074C RNR1P21524 888 aaKnown RBP2.19□□□□□ -2.06
BRE1YDL074C SLY1P22213 666 aa2.19□□□□□ -2.06
BRE1YDL074C TRX1P22217 103 aaKnown RBP2.19□□□□□ -2.06
BRE1YDL074C VPS3P23643 1011 aa2.19□□□□□ -2.06
BRE1YDL074C GCD6P32501 712 aaKnown RBP2.19□□□□□ -2.06
BRE1YDL074C DBP7P36120 742 aaKnown RBP2.19□□□□□ -2.06
BRE1YDL074C APE3P37302 537 aaKnown RBP2.19□□□□□ -2.06
BRE1YDL074C MSR1P38714 643 aa2.19□□□□□ -2.06
BRE1YDL074C YAP1801P38856 637 aa2.19□□□□□ -2.06
BRE1YDL074C SPC97P38863 823 aa2.19□□□□□ -2.06
BRE1YDL074C CKB2P38930 258 aa2.19□□□□□ -2.06
BRE1YDL074C ERP2P39704 215 aa2.19□□□□□ -2.06
BRE1YDL074C GEM1P39722 662 aa2.19□□□□□ -2.06
BRE1YDL074C MRX1P40050 688 aa2.19□□□□□ -2.06
BRE1YDL074C TMN3P40071 706 aa2.19□□□□□ -2.06
BRE1YDL074C SCC4P40090 624 aa2.19□□□□□ -2.06
BRE1YDL074C ASG1P40467 964 aa2.19□□□□□ -2.06
BRE1YDL074C MND2P40577 368 aa2.19□□□□□ -2.06
BRE1YDL074C LAM5P43560 674 aa2.19□□□□□ -2.06
BRE1YDL074C ARC1P46672 376 aaKnown RBP2.19□□□□□ -2.06
BRE1YDL074C SAE2P46946 345 aa2.19□□□□□ -2.06
BRE1YDL074C NMD5P46970 1048 aa2.19□□□□□ -2.06
BRE1YDL074C ALT1P52893 592 aa2.19□□□□□ -2.06
BRE1YDL074C ZIP2P53061 704 aa2.19□□□□□ -2.06
BRE1YDL074C YGL039WP53183 348 aaKnown RBP2.19□□□□□ -2.06
BRE1YDL074C YGL036WP53185 909 aaPredicted RBP2.19□□□□□ -2.06
BRE1YDL074C PEX31P53203 462 aa2.19□□□□□ -2.06
BRE1YDL074C RCF2P53721 224 aa2.19□□□□□ -2.06
BRE1YDL074C ALG11P53954 548 aaKnown RBP2.19□□□□□ -2.06
BRE1YDL074C GTR1Q00582 310 aa2.19□□□□□ -2.06
BRE1YDL074C CUS1Q02554 436 aaPredicted RBP2.19□□□□□ -2.06
BRE1YDL074C YMR102CQ03177 834 aa2.19□□□□□ -2.06
BRE1YDL074C MZM1Q03429 123 aaPredicted RBP2.19□□□□□ -2.06
BRE1YDL074C MSC2Q03455 724 aa2.19□□□□□ -2.06
BRE1YDL074C ADI1Q03677 179 aa2.19□□□□□ -2.06
BRE1YDL074C SND1Q04007 877 aa2.19□□□□□ -2.06
BRE1YDL074C ARO80Q04052 950 aa2.19□□□□□ -2.06
BRE1YDL074C SHE9Q04172 456 aa2.19□□□□□ -2.06
BRE1YDL074C DUS4Q06063 367 aa2.19□□□□□ -2.06
BRE1YDL074C PUS5Q06244 254 aa2.19□□□□□ -2.06
BRE1YDL074C TPO1Q07824 586 aa2.19□□□□□ -2.06
BRE1YDL074C CMS1Q07897 291 aaKnown RBP2.19□□□□□ -2.06
BRE1YDL074C PEX15Q08215 383 aa2.19□□□□□ -2.06
BRE1YDL074C NOB1Q08444 459 aaKnown RBP2.19□□□□□ -2.06
BRE1YDL074C YPL225WQ08971 146 aaKnown RBP2.19□□□□□ -2.06
BRE1YDL074C ICL2Q12031 575 aa2.19□□□□□ -2.06
BRE1YDL074C YLL056CQ12177 298 aa2.19□□□□□ -2.06
BRE1YDL074C YDR018CQ12185 396 aa2.19□□□□□ -2.06
BRE1YDL074C BI2P03873 423 aa2.18□□□□□ -2.06
BRE1YDL074C BI4P03879 638 aa2.18□□□□□ -2.06
BRE1YDL074C CMD1P06787 147 aaKnown RBP2.18□□□□□ -2.06
BRE1YDL074C ILV2P07342 687 aaKnown RBP2.18□□□□□ -2.06
BRE1YDL074C ILS1P09436 1072 aaKnown RBP2.18□□□□□ -2.06
BRE1YDL074C IMA3P0CW40 589 aa2.18□□□□□ -2.06
BRE1YDL074C IMA4P0CW41 589 aa2.18□□□□□ -2.06
BRE1YDL074C POX1P13711 748 aa2.18□□□□□ -2.06
BRE1YDL074C EST1P17214 699 aaPredicted RBP2.18□□□□□ -2.06
BRE1YDL074C HSP60P19882 572 aaKnown RBP2.18□□□□□ -2.06
BRE1YDL074C ADE2P21264 571 aaKnown RBP2.18□□□□□ -2.06
BRE1YDL074C CLB3P24870 427 aa2.18□□□□□ -2.06
BRE1YDL074C RRT12P25381 491 aa2.18□□□□□ -2.06
BRE1YDL074C URA7P28274 579 aaKnown RBP2.18□□□□□ -2.06
BRE1YDL074C CAP1P28495 268 aaKnown RBP2.18□□□□□ -2.06
BRE1YDL074C RIM1P32445 135 aaKnown RBP2.18□□□□□ -2.06
BRE1YDL074C SSE1P32589 693 aaKnown RBP2.18□□□□□ -2.06
BRE1YDL074C GYP6P32806 458 aa2.18□□□□□ -2.06
BRE1YDL074C COY1P34237 679 aa2.18□□□□□ -2.06
BRE1YDL074C MDJ1P35191 511 aa2.18□□□□□ -2.06
BRE1YDL074C TBS1P38114 1094 aa2.18□□□□□ -2.06
BRE1YDL074C DIA4P38705 446 aaPredicted RBP2.18□□□□□ -2.06
BRE1YDL074C ERC1P38767 581 aa2.18□□□□□ -2.06
BRE1YDL074C LIN1P38852 340 aaPredicted RBP2.18□□□□□ -2.06
BRE1YDL074C ALD5P40047 520 aaKnown RBP2.18□□□□□ -2.06
BRE1YDL074C SIP5P40210 489 aaKnown RBP2.18□□□□□ -2.06
BRE1YDL074C TDA10P42938 290 aa2.18□□□□□ -2.06
BRE1YDL074C YJL132WP47014 750 aa2.18□□□□□ -2.06
BRE1YDL074C IML2P47031 731 aa2.18□□□□□ -2.06
BRE1YDL074C RPS7BP48164 190 aaKnown RBP2.18□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms