RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 RBM28Q9NW13 759 aaKnown RBP11.1□□□□□ -0.63
CLTCL1-211ENST00000621271 ZFYVE9O95405 1425 aa11.1□□□□□ -0.63
CLTCL1-211ENST00000621271 KRT2P35908 639 aa11.1□□□□□ -0.63
CLTCL1-211ENST00000621271 HDAC1Q13547 482 aaPredicted RBP11.1□□□□□ -0.63
CLTCL1-211ENST00000621271 AKNAD1Q5T1N1 836 aa11.1□□□□□ -0.63
CLTCL1-211ENST00000621271 SPOUT1Q5T280 376 aaKnown RBP11.1□□□□□ -0.63
CLTCL1-211ENST00000621271 Q6ZUG5 572 aa11.1□□□□□ -0.63
CLTCL1-211ENST00000621271 METTL22Q9BUU2 404 aaPredicted RBP11.1□□□□□ -0.63
CLTCL1-211ENST00000621271 TRIM6Q9C030 488 aaPredicted RBP11.1□□□□□ -0.63
CLTCL1-211ENST00000621271 AS3MTQ9HBK9 375 aa11.1□□□□□ -0.63
CLTCL1-211ENST00000621271 SLC8A3P57103 927 aa11.1□□□□□ -0.63
CLTCL1-211ENST00000621271 TMCO3Q6UWJ1 677 aa11.1□□□□□ -0.63
CLTCL1-211ENST00000621271 CPXCR1Q8N123 301 aa11.1□□□□□ -0.63
CLTCL1-211ENST00000621271 KIF18AQ8NI77 898 aa11.1□□□□□ -0.63
CLTCL1-211ENST00000621271 KCNG4Q8TDN1 519 aa11.1□□□□□ -0.63
CLTCL1-211ENST00000621271 TCEANC2Q96MN5 208 aa11.1□□□□□ -0.63
CLTCL1-211ENST00000621271 TTC12Q9H892 705 aaPredicted RBP11.1□□□□□ -0.63
CLTCL1-211ENST00000621271 ZBTB24O43167 697 aaPredicted RBP11.1□□□□□ -0.63
CLTCL1-211ENST00000621271 TCP10Q12799 353 aa11.1□□□□□ -0.63
CLTCL1-211ENST00000621271 NSMFQ6X4W1 530 aa11.1□□□□□ -0.63
CLTCL1-211ENST00000621271 OTUD6BQ8N6M0 293 aa11.1□□□□□ -0.63
CLTCL1-211ENST00000621271 FSD2A1L4K1 749 aa11.09□□□□□ -0.63
CLTCL1-211ENST00000621271 PABPC4Q13310 644 aaKnown RBP eCLIP11.09□□□□□ -0.63
CLTCL1-211ENST00000621271 DCAF15Q66K64 600 aa11.09□□□□□ -0.63
CLTCL1-211ENST00000621271 IKBKGQ9Y6K9 419 aa11.09□□□□□ -0.63
CLTCL1-211ENST00000621271 MYO5CQ9NQX4 1742 aa11.09□□□□□ -0.63
CLTCL1-211ENST00000621271 MYCLP12524 364 aaPredicted RBP11.09□□□□□ -0.63
CLTCL1-211ENST00000621271 SLC1A4P43007 532 aa11.09□□□□□ -0.63
CLTCL1-211ENST00000621271 EP400NLQ6ZTU2 488 aa11.09□□□□□ -0.63
CLTCL1-211ENST00000621271 SNX21Q969T3 373 aa11.09□□□□□ -0.63
CLTCL1-211ENST00000621271 GLT8D2Q9H1C3 349 aa11.09□□□□□ -0.63
CLTCL1-211ENST00000621271 ARL1P40616 181 aaPredicted RBP11.09□□□□□ -0.63
CLTCL1-211ENST00000621271 MAP2K1Q02750 393 aaPredicted RBP11.09□□□□□ -0.63
CLTCL1-211ENST00000621271 ISM2Q6H9L7 571 aa11.09□□□□□ -0.63
CLTCL1-211ENST00000621271 NECAB1Q8N987 351 aa11.09□□□□□ -0.63
CLTCL1-211ENST00000621271 A0A1B0GUL7 405 aa11.08□□□□□ -0.64
CLTCL1-211ENST00000621271 ADCY5O95622 1261 aa11.08□□□□□ -0.64
CLTCL1-211ENST00000621271 HARSP12081 509 aaKnown RBP11.08□□□□□ -0.64
CLTCL1-211ENST00000621271 SDSP20132 328 aa11.08□□□□□ -0.64
CLTCL1-211ENST00000621271 SPECC1Q5M775 1068 aa11.08□□□□□ -0.64
CLTCL1-211ENST00000621271 ASXL1Q8IXJ9 1541 aa11.08□□□□□ -0.64
CLTCL1-211ENST00000621271 FERP16591 822 aa11.08□□□□□ -0.64
CLTCL1-211ENST00000621271 CASQ1P31415 396 aa11.08□□□□□ -0.64
CLTCL1-211ENST00000621271 SMTNP53814 917 aa11.08□□□□□ -0.64
CLTCL1-211ENST00000621271 SPAG1Q07617 926 aa11.08□□□□□ -0.64
CLTCL1-211ENST00000621271 MAP9Q49MG5 647 aa11.08□□□□□ -0.64
CLTCL1-211ENST00000621271 BABAM1Q9NWV8 329 aa11.08□□□□□ -0.64
CLTCL1-211ENST00000621271 CLIP2Q9UDT6 1046 aa11.08□□□□□ -0.64
CLTCL1-211ENST00000621271 DIP2BQ9P265 1576 aa11.08□□□□□ -0.64
CLTCL1-211ENST00000621271 A0A1W2PP64 1363 aa11.08□□□□□ -0.64
CLTCL1-211ENST00000621271 ERVV-2B6SEH9 535 aa11.08□□□□□ -0.64
CLTCL1-211ENST00000621271 MCM3P25205 808 aa11.08□□□□□ -0.64
CLTCL1-211ENST00000621271 RPS8P62241 208 aaKnown RBP11.08□□□□□ -0.64
CLTCL1-211ENST00000621271 HLTFQ14527 1009 aaKnown RBP eCLIP11.08□□□□□ -0.64
CLTCL1-211ENST00000621271 IFT74Q96LB3 600 aa11.08□□□□□ -0.64
CLTCL1-211ENST00000621271 CALCOCO1Q9P1Z2 691 aa11.08□□□□□ -0.64
CLTCL1-211ENST00000621271 PARD3Q8TEW0 1356 aa11.07□□□□□ -0.64
CLTCL1-211ENST00000621271 NEMFO60524 1076 aa11.07□□□□□ -0.64
CLTCL1-211ENST00000621271 DTHD1Q6ZMT9 781 aa11.07□□□□□ -0.64
CLTCL1-211ENST00000621271 GTPBP4Q9BZE4 634 aaKnown RBP11.07□□□□□ -0.64
CLTCL1-211ENST00000621271 PCDHB15Q9Y5E8 787 aa11.07□□□□□ -0.64
CLTCL1-211ENST00000621271 MCM7P33993 719 aa11.07□□□□□ -0.64
CLTCL1-211ENST00000621271 DNM2P50570 870 aa11.07□□□□□ -0.64
CLTCL1-211ENST00000621271 KIAA0753Q2KHM9 967 aa11.07□□□□□ -0.64
CLTCL1-211ENST00000621271 HS1BP3Q53T59 392 aa11.07□□□□□ -0.64
CLTCL1-211ENST00000621271 DHX37Q8IY37 1157 aaKnown RBP11.07□□□□□ -0.64
CLTCL1-211ENST00000621271 LPIN2Q92539 896 aa11.07□□□□□ -0.64
CLTCL1-211ENST00000621271 TEKT1Q969V4 418 aa11.07□□□□□ -0.64
CLTCL1-211ENST00000621271 FNBP1Q96RU3 617 aa11.07□□□□□ -0.64
CLTCL1-211ENST00000621271 GOLGA6L10A0A0M3HER8 536 aa11.07□□□□□ -0.64
CLTCL1-211ENST00000621271 TAF5LO75529 589 aa11.07□□□□□ -0.64
CLTCL1-211ENST00000621271 TRIM37O94972 964 aa11.07□□□□□ -0.64
CLTCL1-211ENST00000621271 HOXB7P09629 217 aa11.07□□□□□ -0.64
CLTCL1-211ENST00000621271 FAM47CQ5HY64 1035 aa11.07□□□□□ -0.64
CLTCL1-211ENST00000621271 KRT27Q7Z3Y8 459 aa11.07□□□□□ -0.64
CLTCL1-211ENST00000621271 PAGR1Q9BTK6 254 aa11.07□□□□□ -0.64
CLTCL1-211ENST00000621271 ZHX1Q9UKY1 873 aaPredicted RBP11.07□□□□□ -0.64
CLTCL1-211ENST00000621271 CNGA1P29973 690 aa11.07□□□□□ -0.64
CLTCL1-211ENST00000621271 GTF2IP78347 998 aa11.07□□□□□ -0.64
CLTCL1-211ENST00000621271 NUCB1Q02818 461 aa11.07□□□□□ -0.64
CLTCL1-211ENST00000621271 BMS1Q14692 1282 aaKnown RBP11.07□□□□□ -0.64
CLTCL1-211ENST00000621271 DDX12PQ92771 950 aa11.07□□□□□ -0.64
CLTCL1-211ENST00000621271 AATFQ9NY61 560 aaKnown RBP eCLIP11.07□□□□□ -0.64
CLTCL1-211ENST00000621271 CCDC171Q6TFL3 1326 aa11.07□□□□□ -0.64
CLTCL1-211ENST00000621271 CHMP2AO43633 222 aa11.06□□□□□ -0.64
CLTCL1-211ENST00000621271 EEF2P13639 858 aaKnown RBP11.06□□□□□ -0.64
CLTCL1-211ENST00000621271 SMC1AQ14683 1233 aaKnown RBP11.06□□□□□ -0.64
CLTCL1-211ENST00000621271 CHST3Q7LGC8 479 aa11.06□□□□□ -0.64
CLTCL1-211ENST00000621271 CTAGE1Q96RT6 745 aa11.06□□□□□ -0.64
CLTCL1-211ENST00000621271 ZKSCAN5Q9Y2L8 839 aa11.06□□□□□ -0.64
CLTCL1-211ENST00000621271 BIRC3Q13489 604 aa11.06□□□□□ -0.64
CLTCL1-211ENST00000621271 UBE4AQ14139 1066 aa11.06□□□□□ -0.64
CLTCL1-211ENST00000621271 KRT24Q2M2I5 525 aa11.06□□□□□ -0.64
CLTCL1-211ENST00000621271 C16orf45Q96MC5 204 aaPredicted RBP11.06□□□□□ -0.64
CLTCL1-211ENST00000621271 ESYT1Q9BSJ8 1104 aa11.06□□□□□ -0.64
CLTCL1-211ENST00000621271 TTF2Q9UNY4 1162 aaKnown RBP11.06□□□□□ -0.64
CLTCL1-211ENST00000621271 TMEM2Q9UHN6 1383 aa11.06□□□□□ -0.64
CLTCL1-211ENST00000621271 PIK3C2GO75747 1445 aa11.06□□□□□ -0.64
CLTCL1-211ENST00000621271 PRPHP41219 470 aa11.06□□□□□ -0.64
CLTCL1-211ENST00000621271 TIMM10P62072 90 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms