RNA–Protein interactions for RNA: ENST00000617585.1

ARHGEF1-223, Transcript of Rho guanine nucleotide exchange factor 1, human

TSL 2

Gene ARHGEF1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF1-223	ENST00000617585	ARMC9	Q7Z3E5	817 aa		27.83	■■■□□ 2.05
ARHGEF1-223	ENST00000617585	DZIP1L	Q8IYY4	767 aa	Known RBP	27.83	■■■□□ 2.05
ARHGEF1-223	ENST00000617585	CSRNP1	Q96S65	589 aa		27.83	■■■□□ 2.05
ARHGEF1-223	ENST00000617585	SSC5D	A1L4H1	1573 aa		27.82	■■■□□ 2.04
ARHGEF1-223	ENST00000617585	LAMB1	P07942	1786 aa		27.82	■■■□□ 2.04
ARHGEF1-223	ENST00000617585	CHAF1A	Q13111	956 aa	Predicted RBP	27.82	■■■□□ 2.04
ARHGEF1-223	ENST00000617585	ATP2B3	Q16720	1220 aa		27.82	■■■□□ 2.04
ARHGEF1-223	ENST00000617585	CASP8AP2	Q9UKL3	1982 aa		27.81	■■■□□ 2.04
ARHGEF1-223	ENST00000617585	UNCX	A6NJT0	531 aa		27.81	■■■□□ 2.04
ARHGEF1-223	ENST00000617585	SRGAP3	O43295	1099 aa		27.81	■■■□□ 2.04
ARHGEF1-223	ENST00000617585	ZNF70	Q9UC06	446 aa	Predicted RBP	27.81	■■■□□ 2.04
ARHGEF1-223	ENST00000617585	GNAI2	P04899	355 aa		27.8	■■■□□ 2.04
ARHGEF1-223	ENST00000617585	TNFAIP1	Q13829	316 aa		27.8	■■■□□ 2.04
ARHGEF1-223	ENST00000617585	TTLL12	Q14166	644 aa	Predicted RBP	27.8	■■■□□ 2.04
ARHGEF1-223	ENST00000617585	SUPT20HL1	Q3ZLR7	823 aa		27.8	■■■□□ 2.04
ARHGEF1-223	ENST00000617585	WDR66	Q8TBY9	1149 aa		27.8	■■■□□ 2.04
ARHGEF1-223	ENST00000617585	CLUAP1	Q96AJ1	413 aa		27.8	■■■□□ 2.04
ARHGEF1-223	ENST00000617585	MAST3	O60307	1309 aa		27.79	■■■□□ 2.04
ARHGEF1-223	ENST00000617585	RASA3	Q14644	834 aa		27.79	■■■□□ 2.04
ARHGEF1-223	ENST00000617585	TMEM57	Q8N5G2	664 aa		27.79	■■■□□ 2.04
ARHGEF1-223	ENST00000617585	TDRD3	Q9H7E2	651 aa	Known RBP	27.79	■■■□□ 2.04
ARHGEF1-223	ENST00000617585	VEZT	Q9HBM0	779 aa		27.79	■■■□□ 2.04
ARHGEF1-223	ENST00000617585	TSKS	Q9UJT2	592 aa		27.79	■■■□□ 2.04
ARHGEF1-223	ENST00000617585	TEKT1	Q969V4	418 aa		27.78	■■■□□ 2.04
ARHGEF1-223	ENST00000617585	ZDHHC15	Q96MV8	337 aa		27.78	■■■□□ 2.04
ARHGEF1-223	ENST00000617585	SEMA3E	O15041	775 aa		27.77	■■■□□ 2.04
ARHGEF1-223	ENST00000617585	HHIPL2	Q6UWX4	724 aa		27.77	■■■□□ 2.04
ARHGEF1-223	ENST00000617585	RNF186	Q9NXI6	227 aa		27.77	■■■□□ 2.04
ARHGEF1-223	ENST00000617585	ANGEL1	Q9UNK9	670 aa	Known RBP	27.77	■■■□□ 2.04
ARHGEF1-223	ENST00000617585	SALL1	Q9NSC2	1324 aa		27.76	■■■□□ 2.03
ARHGEF1-223	ENST00000617585	PPP1R12B	O60237	982 aa	Predicted RBP	27.76	■■■□□ 2.03
ARHGEF1-223	ENST00000617585	NBPF12	Q5TAG4	269 aa	Predicted RBP	27.76	■■■□□ 2.03
ARHGEF1-223	ENST00000617585	TEPSIN	Q96N21	525 aa		27.76	■■■□□ 2.03
ARHGEF1-223	ENST00000617585	TM4SF4	P48230	202 aa		27.75	■■■□□ 2.03
ARHGEF1-223	ENST00000617585	GNL3L	Q9NVN8	582 aa	Known RBP	27.75	■■■□□ 2.03
ARHGEF1-223	ENST00000617585	PRKG1	Q13976	671 aa		27.74	■■■□□ 2.03
ARHGEF1-223	ENST00000617585	FKBP1C	Q5VVH2	108 aa		27.74	■■■□□ 2.03
ARHGEF1-223	ENST00000617585	APOBEC3H	Q6NTF7	200 aa	Known RBP	27.74	■■■□□ 2.03
ARHGEF1-223	ENST00000617585	DENND2A	Q9ULE3	1009 aa		27.74	■■■□□ 2.03
ARHGEF1-223	ENST00000617585	AKAP2	Q9Y2D5	859 aa		27.74	■■■□□ 2.03
ARHGEF1-223	ENST00000617585	PNMA6E	A0A0J9YXQ4	647 aa		27.73	■■■□□ 2.03
ARHGEF1-223	ENST00000617585	PHKA1	P46020	1223 aa		27.73	■■■□□ 2.03
ARHGEF1-223	ENST00000617585	PDS5A	Q29RF7	1337 aa	Known RBP	27.72	■■■□□ 2.03
ARHGEF1-223	ENST00000617585	OTOF	Q9HC10	1997 aa		27.72	■■■□□ 2.03
ARHGEF1-223	ENST00000617585	USP2	O75604	605 aa	Predicted RBP	27.72	■■■□□ 2.03
ARHGEF1-223	ENST00000617585	TNNI2	P48788	182 aa		27.72	■■■□□ 2.03
ARHGEF1-223	ENST00000617585	TIMM10	P62072	90 aa		27.72	■■■□□ 2.03
ARHGEF1-223	ENST00000617585	CCDC102B	Q68D86	513 aa		27.72	■■■□□ 2.03
ARHGEF1-223	ENST00000617585	FZD1	Q9UP38	647 aa		27.72	■■■□□ 2.03
ARHGEF1-223	ENST00000617585	TRPA1	O75762	1119 aa		27.71	■■■□□ 2.03
ARHGEF1-223	ENST00000617585	ADORA1	P30542	326 aa		27.71	■■■□□ 2.03
ARHGEF1-223	ENST00000617585	TFCP2	Q12800	502 aa		27.71	■■■□□ 2.03
ARHGEF1-223	ENST00000617585	SPRYD7	Q5W111	196 aa		27.71	■■■□□ 2.03
ARHGEF1-223	ENST00000617585		A0A1B0GUL7	405 aa		27.7	■■■□□ 2.02
ARHGEF1-223	ENST00000617585	RLBP1	P12271	317 aa		27.7	■■■□□ 2.02
ARHGEF1-223	ENST00000617585	POLA2	Q14181	598 aa		27.7	■■■□□ 2.02
ARHGEF1-223	ENST00000617585	FAM83A	Q86UY5	434 aa		27.7	■■■□□ 2.02
ARHGEF1-223	ENST00000617585	TCP10L2	B9ZVM9	353 aa		27.69	■■■□□ 2.02
ARHGEF1-223	ENST00000617585	ZBTB7B	O15156	539 aa	Predicted RBP	27.69	■■■□□ 2.02
ARHGEF1-223	ENST00000617585	IREB2	P48200	963 aa	Known RBP	27.69	■■■□□ 2.02
ARHGEF1-223	ENST00000617585	FTSJ3	Q8IY81	847 aa	Known RBP	27.69	■■■□□ 2.02
ARHGEF1-223	ENST00000617585	SSH3	Q8TE77	659 aa		27.69	■■■□□ 2.02
ARHGEF1-223	ENST00000617585	SLC10A4	Q96EP9	437 aa		27.69	■■■□□ 2.02
ARHGEF1-223	ENST00000617585	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	27.69	■■■□□ 2.02
ARHGEF1-223	ENST00000617585	ZBTB48	P10074	688 aa	Predicted RBP	27.68	■■■□□ 2.02
ARHGEF1-223	ENST00000617585	PRDX5	P30044	214 aa		27.68	■■■□□ 2.02
ARHGEF1-223	ENST00000617585	ATP8B2	P98198	1209 aa		27.68	■■■□□ 2.02
ARHGEF1-223	ENST00000617585	XAGE2	Q96GT9	111 aa		27.68	■■■□□ 2.02
ARHGEF1-223	ENST00000617585	TMEM39B	Q9GZU3	492 aa		27.68	■■■□□ 2.02
ARHGEF1-223	ENST00000617585	MYH2	Q9UKX2	1941 aa		27.68	■■■□□ 2.02
ARHGEF1-223	ENST00000617585	SREBF2	Q12772	1141 aa		27.67	■■■□□ 2.02
ARHGEF1-223	ENST00000617585	CDAN1	Q8IWY9	1227 aa		27.67	■■■□□ 2.02
ARHGEF1-223	ENST00000617585	ANKRD13A	Q8IZ07	590 aa		27.67	■■■□□ 2.02
ARHGEF1-223	ENST00000617585	CLMN	Q96JQ2	1002 aa		27.67	■■■□□ 2.02
ARHGEF1-223	ENST00000617585	CFHR5	Q9BXR6	569 aa		27.67	■■■□□ 2.02
ARHGEF1-223	ENST00000617585	RPAP1	Q9BWH6	1393 aa	Predicted RBP	27.66	■■■□□ 2.02
ARHGEF1-223	ENST00000617585	LDHB	P07195	334 aa	Known RBP	27.66	■■■□□ 2.02
ARHGEF1-223	ENST00000617585	MVP	Q14764	893 aa	Known RBP	27.66	■■■□□ 2.02
ARHGEF1-223	ENST00000617585	ZGPAT	Q8N5A5	531 aa	Known RBP	27.66	■■■□□ 2.02
ARHGEF1-223	ENST00000617585	TMOD2	Q9NZR1	351 aa		27.66	■■■□□ 2.02
ARHGEF1-223	ENST00000617585	DAGLA	Q9Y4D2	1042 aa		27.66	■■■□□ 2.02
ARHGEF1-223	ENST00000617585	INHBE	P58166	350 aa		27.65	■■■□□ 2.02
ARHGEF1-223	ENST00000617585	G3BP1	Q13283	466 aa	Known RBP eCLIP	27.65	■■■□□ 2.02
ARHGEF1-223	ENST00000617585	RASGRF1	Q13972	1273 aa		27.65	■■■□□ 2.02
ARHGEF1-223	ENST00000617585	NOM1	Q5C9Z4	860 aa	Known RBP	27.65	■■■□□ 2.02
ARHGEF1-223	ENST00000617585	ABHD8	Q96I13	439 aa		27.65	■■■□□ 2.02
ARHGEF1-223	ENST00000617585	WNK4	Q96J92	1243 aa		27.65	■■■□□ 2.02
ARHGEF1-223	ENST00000617585	MANSC4	A6NHS7	340 aa	Predicted RBP	27.64	■■■□□ 2.02
ARHGEF1-223	ENST00000617585	CAPN15	O75808	1086 aa		27.64	■■■□□ 2.02
ARHGEF1-223	ENST00000617585	GPR108	Q9NPR9	543 aa		27.64	■■■□□ 2.02
ARHGEF1-223	ENST00000617585	CACNB3	P54284	484 aa		27.63	■■■□□ 2.01
ARHGEF1-223	ENST00000617585	ITPRIP	Q8IWB1	547 aa		27.63	■■■□□ 2.01
ARHGEF1-223	ENST00000617585	MKRN3	Q13064	507 aa	Known RBP	27.62	■■■□□ 2.01
ARHGEF1-223	ENST00000617585	DIXDC1	Q155Q3	683 aa		27.62	■■■□□ 2.01
ARHGEF1-223	ENST00000617585	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	27.62	■■■□□ 2.01
ARHGEF1-223	ENST00000617585	FAM163A	Q96GL9	167 aa	Predicted RBP	27.62	■■■□□ 2.01
ARHGEF1-223	ENST00000617585	NOP58	Q9Y2X3	529 aa	Known RBP	27.62	■■■□□ 2.01
ARHGEF1-223	ENST00000617585	CDC42EP5	Q6NZY7	148 aa		27.61	■■■□□ 2.01
ARHGEF1-223	ENST00000617585	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	27.61	■■■□□ 2.01
ARHGEF1-223	ENST00000617585	HOOK2	Q96ED9	719 aa		27.61	■■■□□ 2.01

Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms