RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 EGFLAMQ63HQ2 1017 aa7.5□□□□□ -1.21
LINC00397-202ENST00000606785 JAZF1Q86VZ6 243 aa7.5□□□□□ -1.21
LINC00397-202ENST00000606785 SLITRK4Q8IW52 837 aa7.5□□□□□ -1.21
LINC00397-202ENST00000606785 TRIM42Q8IWZ5 723 aa7.5□□□□□ -1.21
LINC00397-202ENST00000606785 ASAP3Q8TDY4 903 aa7.5□□□□□ -1.21
LINC00397-202ENST00000606785 CPLX3Q8WVH0 158 aa7.5□□□□□ -1.21
LINC00397-202ENST00000606785 NKD1Q969G9 470 aa7.5□□□□□ -1.21
LINC00397-202ENST00000606785 KRTAP9-2Q9BYQ4 174 aa7.5□□□□□ -1.21
LINC00397-202ENST00000606785 RASSF4Q9H2L5 321 aa7.5□□□□□ -1.21
LINC00397-202ENST00000606785 SIRPGQ9P1W8 387 aa7.5□□□□□ -1.21
LINC00397-202ENST00000606785 GPN3Q9UHW5 284 aaPredicted RBP7.5□□□□□ -1.21
LINC00397-202ENST00000606785 ROBO2Q9HCK4 1378 aa7.49□□□□□ -1.21
LINC00397-202ENST00000606785 ZBTB42B2RXF5 422 aa7.49□□□□□ -1.21
LINC00397-202ENST00000606785 KLF4O43474 513 aa7.49□□□□□ -1.21
LINC00397-202ENST00000606785 PAGE1O75459 146 aa7.49□□□□□ -1.21
LINC00397-202ENST00000606785 ATP11AP98196 1134 aa7.49□□□□□ -1.21
LINC00397-202ENST00000606785 RAB33AQ14088 237 aa7.49□□□□□ -1.21
LINC00397-202ENST00000606785 PCSK7Q16549 785 aa7.49□□□□□ -1.21
LINC00397-202ENST00000606785 CCDC84Q86UT8 332 aaPredicted RBP7.49□□□□□ -1.21
LINC00397-202ENST00000606785 ZNF837Q96EG3 531 aaPredicted RBP7.49□□□□□ -1.21
LINC00397-202ENST00000606785 SRRTQ9BXP5 876 aaKnown RBP7.49□□□□□ -1.21
LINC00397-202ENST00000606785 LRRC3Q9BY71 257 aa7.49□□□□□ -1.21
LINC00397-202ENST00000606785 TRIM55Q9BYV6 548 aa7.49□□□□□ -1.21
LINC00397-202ENST00000606785 MBIPQ9NS73 344 aa7.49□□□□□ -1.21
LINC00397-202ENST00000606785 TMEM39AQ9NV64 488 aa7.49□□□□□ -1.21
LINC00397-202ENST00000606785 PHF24Q9UPV7 400 aa7.49□□□□□ -1.21
LINC00397-202ENST00000606785 J3QW42 95 aa7.48□□□□□ -1.21
LINC00397-202ENST00000606785 GHRHP01286 108 aa7.48□□□□□ -1.21
LINC00397-202ENST00000606785 FGFR3P22607 806 aa7.48□□□□□ -1.21
LINC00397-202ENST00000606785 MLLT1Q03111 559 aaPredicted RBP7.48□□□□□ -1.21
LINC00397-202ENST00000606785 PPP2R3AQ06190 1150 aa7.48□□□□□ -1.21
LINC00397-202ENST00000606785 ANKRD13AQ8IZ07 590 aa7.48□□□□□ -1.21
LINC00397-202ENST00000606785 ANAPC16Q96DE5 110 aa7.48□□□□□ -1.21
LINC00397-202ENST00000606785 MUC3BQ9H195 1237 aa7.48□□□□□ -1.21
LINC00397-202ENST00000606785 RBSNQ9H1K0 784 aa7.48□□□□□ -1.21
LINC00397-202ENST00000606785 PRKAG3Q9UGI9 489 aa7.48□□□□□ -1.21
LINC00397-202ENST00000606785 SAMM50Q9Y512 469 aa7.48□□□□□ -1.21
LINC00397-202ENST00000606785 SBNO2Q9Y2G9 1366 aa7.47□□□□□ -1.21
LINC00397-202ENST00000606785 U2SURPO15042 1029 aaKnown RBP7.47□□□□□ -1.21
LINC00397-202ENST00000606785 BCRP11274 1271 aa7.47□□□□□ -1.21
LINC00397-202ENST00000606785 LMNB1P20700 586 aa7.47□□□□□ -1.21
LINC00397-202ENST00000606785 HFE2Q6ZVN8 426 aa7.47□□□□□ -1.21
LINC00397-202ENST00000606785 HNRNPLLQ8WVV9 542 aaKnown RBP7.47□□□□□ -1.21
LINC00397-202ENST00000606785 GATAD2BQ8WXI9 593 aa7.47□□□□□ -1.21
LINC00397-202ENST00000606785 BSNDQ8WZ55 320 aa7.47□□□□□ -1.21
LINC00397-202ENST00000606785 GTPBP3Q969Y2 492 aaKnown RBP7.47□□□□□ -1.21
LINC00397-202ENST00000606785 SHDQ96IW2 340 aa7.47□□□□□ -1.21
LINC00397-202ENST00000606785 POP1Q99575 1024 aaKnown RBP7.47□□□□□ -1.21
LINC00397-202ENST00000606785 MIR1-1HGQ9H1L0 117 aa7.47□□□□□ -1.21
LINC00397-202ENST00000606785 CLEC4MQ9H2X3 399 aaPredicted RBP7.47□□□□□ -1.21
LINC00397-202ENST00000606785 MRPL42Q9Y6G3 142 aaKnown RBP7.47□□□□□ -1.21
LINC00397-202ENST00000606785 KRTAP9-6A0A140TA67 174 aa7.46□□□□□ -1.22
LINC00397-202ENST00000606785 SMNDC1O75940 238 aaKnown RBP eCLIP7.46□□□□□ -1.22
LINC00397-202ENST00000606785 F13A1P00488 732 aa7.46□□□□□ -1.22
LINC00397-202ENST00000606785 SEZ6Q53EL9 994 aa7.46□□□□□ -1.22
LINC00397-202ENST00000606785 BNC2Q6ZN30 1099 aaPredicted RBP7.46□□□□□ -1.22
LINC00397-202ENST00000606785 NEDD1Q8NHV4 660 aa7.46□□□□□ -1.22
LINC00397-202ENST00000606785 SRPK1Q96SB4 655 aaKnown RBP7.46□□□□□ -1.22
LINC00397-202ENST00000606785 LRRC4BQ9NT99 713 aa7.46□□□□□ -1.22
LINC00397-202ENST00000606785 DNAJB12Q9NXW2 375 aaKnown RBP7.46□□□□□ -1.22
LINC00397-202ENST00000606785 PRR12Q9ULL5 1215 aa7.46□□□□□ -1.22
LINC00397-202ENST00000606785 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.46□□□□□ -1.22
LINC00397-202ENST00000606785 R3HCC1Q9Y3T6 440 aaKnown RBP7.46□□□□□ -1.22
LINC00397-202ENST00000606785 PCDHB5Q9Y5E4 795 aa7.46□□□□□ -1.22
LINC00397-202ENST00000606785 FAM221AA4D161 298 aa7.45□□□□□ -1.22
LINC00397-202ENST00000606785 HSD3B2P26439 372 aa7.45□□□□□ -1.22
LINC00397-202ENST00000606785 BAG6P46379 1132 aa7.45□□□□□ -1.22
LINC00397-202ENST00000606785 ZNF157P51786 506 aaPredicted RBP7.45□□□□□ -1.22
LINC00397-202ENST00000606785 MPP2Q14168 576 aa7.45□□□□□ -1.22
LINC00397-202ENST00000606785 TCEAL1Q15170 157 aa7.45□□□□□ -1.22
LINC00397-202ENST00000606785 TNNI3KQ59H18 835 aa7.45□□□□□ -1.22
LINC00397-202ENST00000606785 CEP135Q66GS9 1140 aa7.45□□□□□ -1.22
LINC00397-202ENST00000606785 CCDC81Q6ZN84 652 aa7.45□□□□□ -1.22
LINC00397-202ENST00000606785 LRP10Q7Z4F1 713 aa7.45□□□□□ -1.22
LINC00397-202ENST00000606785 FBXO27Q8NI29 283 aa7.45□□□□□ -1.22
LINC00397-202ENST00000606785 UBE2OQ9C0C9 1292 aaKnown RBP7.45□□□□□ -1.22
LINC00397-202ENST00000606785 IGFLR1Q9H665 355 aa7.45□□□□□ -1.22
LINC00397-202ENST00000606785 PPT2Q9UMR5 302 aa7.45□□□□□ -1.22
LINC00397-202ENST00000606785 CYP8B1Q9UNU6 501 aa7.45□□□□□ -1.22
LINC00397-202ENST00000606785 TLR3O15455 904 aaKnown RBP7.44□□□□□ -1.22
LINC00397-202ENST00000606785 B3GALT4O96024 378 aa7.44□□□□□ -1.22
LINC00397-202ENST00000606785 EIF2AK2P19525 551 aaKnown RBP7.44□□□□□ -1.22
LINC00397-202ENST00000606785 BMP6P22004 513 aa7.44□□□□□ -1.22
LINC00397-202ENST00000606785 NME2P22392 152 aa7.44□□□□□ -1.22
LINC00397-202ENST00000606785 CTBSQ01459 385 aa7.44□□□□□ -1.22
LINC00397-202ENST00000606785 PCDH1Q08174 1060 aa7.44□□□□□ -1.22
LINC00397-202ENST00000606785 CWF19L2Q2TBE0 894 aaKnown RBP7.44□□□□□ -1.22
LINC00397-202ENST00000606785 RASIP1Q5U651 963 aa7.44□□□□□ -1.22
LINC00397-202ENST00000606785 ZNF468Q5VIY5 522 aaPredicted RBP7.44□□□□□ -1.22
LINC00397-202ENST00000606785 DIEXFQ68CQ4 756 aaKnown RBP7.44□□□□□ -1.22
LINC00397-202ENST00000606785 SYT9Q86SS6 491 aa7.44□□□□□ -1.22
LINC00397-202ENST00000606785 JARID2Q92833 1246 aaPredicted RBP7.44□□□□□ -1.22
LINC00397-202ENST00000606785 TRERF1Q96PN7 1200 aa7.44□□□□□ -1.22
LINC00397-202ENST00000606785 SNTG2Q9NY99 539 aa7.44□□□□□ -1.22
LINC00397-202ENST00000606785 IGF1RP08069 1367 aa7.44□□□□□ -1.22
LINC00397-202ENST00000606785 SMAD7O15105 426 aaKnown RBP7.43□□□□□ -1.22
LINC00397-202ENST00000606785 SIN3BO75182 1162 aa7.43□□□□□ -1.22
LINC00397-202ENST00000606785 CILPO75339 1184 aa7.43□□□□□ -1.22
LINC00397-202ENST00000606785 CLSTN1O94985 981 aa7.43□□□□□ -1.22
LINC00397-202ENST00000606785 GIPRP48546 466 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms