RNA–Protein interactions for RNA: ENST00000604624.6

KCNMA1-223, Transcript of potassium calcium-activated channel subfamily M alpha 1, human

APPRIS ALT2 TSL 1 (best)

Gene KCNMA1, Length 11,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNMA1-223	ENST00000604624	DCC	P43146	1447 aa		4.6	□□□□□ -1.67
KCNMA1-223	ENST00000604624	SSH2	Q76I76	1423 aa		4.6	□□□□□ -1.67
KCNMA1-223	ENST00000604624	CCDC196	A0A1B0GTZ2	297 aa		4.6	□□□□□ -1.67
KCNMA1-223	ENST00000604624	CCDC122	Q5T0U0	273 aa		4.6	□□□□□ -1.67
KCNMA1-223	ENST00000604624	ZNF710	Q8N1W2	664 aa		4.6	□□□□□ -1.67
KCNMA1-223	ENST00000604624	CCDC77	Q9BR77	488 aa		4.6	□□□□□ -1.67
KCNMA1-223	ENST00000604624	TBX22	Q9Y458	520 aa		4.6	□□□□□ -1.67
KCNMA1-223	ENST00000604624	CCDC159	P0C7I6	412 aa		4.6	□□□□□ -1.67
KCNMA1-223	ENST00000604624	PTGS1	P23219	599 aa		4.6	□□□□□ -1.67
KCNMA1-223	ENST00000604624	DAB2	P98082	770 aa		4.6	□□□□□ -1.67
KCNMA1-223	ENST00000604624	AP1AR	Q63HQ0	302 aa		4.6	□□□□□ -1.67
KCNMA1-223	ENST00000604624	TBC1D5	Q92609	795 aa		4.6	□□□□□ -1.67
KCNMA1-223	ENST00000604624	SPAG5	Q96R06	1193 aa		4.6	□□□□□ -1.67
KCNMA1-223	ENST00000604624	RASSF4	Q9H2L5	321 aa		4.6	□□□□□ -1.67
KCNMA1-223	ENST00000604624	CEP131	Q9UPN4	1083 aa		4.6	□□□□□ -1.67
KCNMA1-223	ENST00000604624	USP47	Q96K76	1375 aa		4.6	□□□□□ -1.67
KCNMA1-223	ENST00000604624	POTEB2	H3BUK9	544 aa		4.6	□□□□□ -1.67
KCNMA1-223	ENST00000604624	STX6	O43752	255 aa		4.6	□□□□□ -1.67
KCNMA1-223	ENST00000604624	MTIF2	P46199	727 aa	Known RBP	4.6	□□□□□ -1.67
KCNMA1-223	ENST00000604624	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	4.6	□□□□□ -1.67
KCNMA1-223	ENST00000604624	ABCC6	O95255	1503 aa		4.6	□□□□□ -1.67
KCNMA1-223	ENST00000604624	AHI1	Q8N157	1196 aa		4.59	□□□□□ -1.67
KCNMA1-223	ENST00000604624	KRT222	Q8N1A0	295 aa		4.59	□□□□□ -1.67
KCNMA1-223	ENST00000604624	FNBP4	Q8N3X1	1017 aa	Predicted RBP	4.59	□□□□□ -1.67
KCNMA1-223	ENST00000604624	DCLK2	Q8N568	766 aa		4.59	□□□□□ -1.67
KCNMA1-223	ENST00000604624	EXOC6	Q8TAG9	804 aa		4.59	□□□□□ -1.67
KCNMA1-223	ENST00000604624	NOP14	P78316	857 aa	Known RBP	4.59	□□□□□ -1.67
KCNMA1-223	ENST00000604624	SNW1	Q13573	536 aa	Known RBP	4.59	□□□□□ -1.67
KCNMA1-223	ENST00000604624	CCDC117	Q8IWD4	279 aa	Predicted RBP	4.59	□□□□□ -1.67
KCNMA1-223	ENST00000604624	RAB34	Q9BZG1	259 aa		4.59	□□□□□ -1.67
KCNMA1-223	ENST00000604624	WDR33	Q9C0J8	1336 aa	Known RBP	4.59	□□□□□ -1.67
KCNMA1-223	ENST00000604624	NBN	O60934	754 aa		4.59	□□□□□ -1.67
KCNMA1-223	ENST00000604624	CNGA1	P29973	690 aa		4.59	□□□□□ -1.67
KCNMA1-223	ENST00000604624	CLUL1	Q15846	466 aa		4.59	□□□□□ -1.67
KCNMA1-223	ENST00000604624	HSP90AA4P	Q58FG1	418 aa		4.59	□□□□□ -1.67
KCNMA1-223	ENST00000604624	KIFC2	Q96AC6	838 aa		4.59	□□□□□ -1.67
KCNMA1-223	ENST00000604624	SRCIN1	Q9C0H9	1055 aa		4.59	□□□□□ -1.67
KCNMA1-223	ENST00000604624	ITM2B	Q9Y287	266 aa		4.59	□□□□□ -1.67
KCNMA1-223	ENST00000604624	STK38L	Q9Y2H1	464 aa		4.59	□□□□□ -1.67
KCNMA1-223	ENST00000604624	PTPRU	Q92729	1446 aa		4.59	□□□□□ -1.67
KCNMA1-223	ENST00000604624	AATK	Q6ZMQ8	1374 aa		4.59	□□□□□ -1.67
KCNMA1-223	ENST00000604624	IGSF3	O75054	1194 aa		4.59	□□□□□ -1.67
KCNMA1-223	ENST00000604624	PPFIA1	Q13136	1202 aa		4.59	□□□□□ -1.67
KCNMA1-223	ENST00000604624	AKNAD1	Q5T1N1	836 aa		4.59	□□□□□ -1.67
KCNMA1-223	ENST00000604624	SELENOO	Q9BVL4	669 aa		4.59	□□□□□ -1.67
KCNMA1-223	ENST00000604624	CDC45	O75419	566 aa		4.59	□□□□□ -1.67
KCNMA1-223	ENST00000604624	XRCC6	P12956	609 aa	Known RBP eCLIP	4.59	□□□□□ -1.67
KCNMA1-223	ENST00000604624	MCM2	P49736	904 aa		4.59	□□□□□ -1.67
KCNMA1-223	ENST00000604624	KIF22	Q14807	665 aa		4.59	□□□□□ -1.67
KCNMA1-223	ENST00000604624	SLC4A8	Q2Y0W8	1093 aa		4.59	□□□□□ -1.67
KCNMA1-223	ENST00000604624	FYB2	Q5VWT5	728 aa		4.59	□□□□□ -1.67
KCNMA1-223	ENST00000604624	CKAP2L	Q8IYA6	745 aa		4.59	□□□□□ -1.67
KCNMA1-223	ENST00000604624	CAPZA3	Q96KX2	299 aa		4.59	□□□□□ -1.67
KCNMA1-223	ENST00000604624	RILP	Q96NA2	401 aa		4.59	□□□□□ -1.67
KCNMA1-223	ENST00000604624	MPHOSPH8	Q99549	860 aa		4.59	□□□□□ -1.67
KCNMA1-223	ENST00000604624	ATP6V0A2	Q9Y487	856 aa		4.59	□□□□□ -1.67
KCNMA1-223	ENST00000604624	PTPRM	P28827	1452 aa		4.59	□□□□□ -1.67
KCNMA1-223	ENST00000604624	PNPLA6	Q8IY17	1366 aa		4.59	□□□□□ -1.67
KCNMA1-223	ENST00000604624	CASP2	P42575	452 aa		4.59	□□□□□ -1.67
KCNMA1-223	ENST00000604624	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	4.59	□□□□□ -1.67
KCNMA1-223	ENST00000604624	AEBP2	Q6ZN18	517 aa	Predicted RBP	4.59	□□□□□ -1.67
KCNMA1-223	ENST00000604624	ZSCAN30	Q86W11	494 aa		4.59	□□□□□ -1.67
KCNMA1-223	ENST00000604624	PNISR	Q8TF01	805 aa	Known RBP	4.59	□□□□□ -1.67
KCNMA1-223	ENST00000604624	FAM212A	Q96EL1	285 aa		4.59	□□□□□ -1.67
KCNMA1-223	ENST00000604624	TMEM131L	A2VDJ0	1609 aa		4.59	□□□□□ -1.67
KCNMA1-223	ENST00000604624	PCYT1A	P49585	367 aa		4.59	□□□□□ -1.68
KCNMA1-223	ENST00000604624	GNG11	P61952	73 aa		4.59	□□□□□ -1.68
KCNMA1-223	ENST00000604624	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	4.59	□□□□□ -1.68
KCNMA1-223	ENST00000604624	COG3	Q96JB2	828 aa		4.59	□□□□□ -1.68
KCNMA1-223	ENST00000604624	CCDC68	Q9H2F9	335 aa		4.59	□□□□□ -1.68
KCNMA1-223	ENST00000604624	ABCF2	Q9UG63	623 aa		4.59	□□□□□ -1.68
KCNMA1-223	ENST00000604624	EID1	Q9Y6B2	187 aa		4.59	□□□□□ -1.68
KCNMA1-223	ENST00000604624	NCAPD2	Q15021	1401 aa		4.59	□□□□□ -1.68
KCNMA1-223	ENST00000604624	SPDYE2B	A6NHP3	402 aa		4.59	□□□□□ -1.68
KCNMA1-223	ENST00000604624	SPDYE6	P0CI01	402 aa		4.59	□□□□□ -1.68
KCNMA1-223	ENST00000604624	FBXW4	P57775	412 aa		4.59	□□□□□ -1.68
KCNMA1-223	ENST00000604624	CCDC40	Q4G0X9	1142 aa		4.59	□□□□□ -1.68
KCNMA1-223	ENST00000604624	SKA2	Q8WVK7	121 aa	Predicted RBP	4.59	□□□□□ -1.68
KCNMA1-223	ENST00000604624	RPGRIP1	Q96KN7	1286 aa		4.59	□□□□□ -1.68
KCNMA1-223	ENST00000604624	DAAM1	Q9Y4D1	1078 aa		4.59	□□□□□ -1.68
KCNMA1-223	ENST00000604624	CCDC171	Q6TFL3	1326 aa		4.59	□□□□□ -1.68
KCNMA1-223	ENST00000604624	HIP1	O00291	1037 aa		4.59	□□□□□ -1.68
KCNMA1-223	ENST00000604624	SURF6	O75683	361 aa	Known RBP	4.59	□□□□□ -1.68
KCNMA1-223	ENST00000604624	IFI16	Q16666	785 aa	Known RBP	4.59	□□□□□ -1.68
KCNMA1-223	ENST00000604624	TRIM60	Q495X7	471 aa		4.59	□□□□□ -1.68
KCNMA1-223	ENST00000604624	TMC6	Q7Z403	805 aa		4.59	□□□□□ -1.68
KCNMA1-223	ENST00000604624	TTC12	Q9H892	705 aa	Predicted RBP	4.59	□□□□□ -1.68
KCNMA1-223	ENST00000604624	CLTCL1	P53675	1640 aa		4.58	□□□□□ -1.68
KCNMA1-223	ENST00000604624	RPS6KA2	Q15349	733 aa		4.58	□□□□□ -1.68
KCNMA1-223	ENST00000604624	NBPF1	Q3BBV0	1214 aa		4.58	□□□□□ -1.68
KCNMA1-223	ENST00000604624	HELB	Q8NG08	1087 aa	Predicted RBP	4.58	□□□□□ -1.68
KCNMA1-223	ENST00000604624	RNF217	Q8TC41	542 aa		4.58	□□□□□ -1.68
KCNMA1-223	ENST00000604624	TRIM4	Q9C037	500 aa		4.58	□□□□□ -1.68
KCNMA1-223	ENST00000604624	BZW2	Q9Y6E2	419 aa	Known RBP	4.58	□□□□□ -1.68
KCNMA1-223	ENST00000604624	IBTK	Q9P2D0	1353 aa	Predicted RBP	4.58	□□□□□ -1.68
KCNMA1-223	ENST00000604624	BIN1	O00499	593 aa		4.58	□□□□□ -1.68
KCNMA1-223	ENST00000604624	ATP6V1A	P38606	617 aa		4.58	□□□□□ -1.68
KCNMA1-223	ENST00000604624	PLCB4	Q15147	1175 aa		4.58	□□□□□ -1.68
KCNMA1-223	ENST00000604624	SDCCAG3	Q96C92	435 aa		4.58	□□□□□ -1.68
KCNMA1-223	ENST00000604624	LRP2BP	Q9P2M1	347 aa		4.58	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms