RNA–Protein interactions for RNA: ENST00000602492.5

PPFIA3-204, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 4

Gene PPFIA3, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-204ENST00000602492 CHAF1AQ13111 956 aaPredicted RBP25.42■■□□□ 1.66
PPFIA3-204ENST00000602492 LRRC24Q50LG9 513 aa25.42■■□□□ 1.66
PPFIA3-204ENST00000602492 CAVIN4Q5BKX8 364 aa25.42■■□□□ 1.66
PPFIA3-204ENST00000602492 ANKRD44Q8N8A2 993 aa25.42■■□□□ 1.66
PPFIA3-204ENST00000602492 TBC1D22AQ8WUA7 517 aa25.42■■□□□ 1.66
PPFIA3-204ENST00000602492 ELP3Q9H9T3 547 aa25.42■■□□□ 1.66
PPFIA3-204ENST00000602492 IQSEC3Q9UPP2 1182 aaPredicted RBP25.42■■□□□ 1.66
PPFIA3-204ENST00000602492 TCP10L2B9ZVM9 353 aa25.41■■□□□ 1.66
PPFIA3-204ENST00000602492 FRAT2O75474 233 aaPredicted RBP25.41■■□□□ 1.66
PPFIA3-204ENST00000602492 TEPSINQ96N21 525 aa25.41■■□□□ 1.66
PPFIA3-204ENST00000602492 PTPRCP08575 1304 aa25.4■■□□□ 1.66
PPFIA3-204ENST00000602492 HTTP42858 3142 aa25.4■■□□□ 1.66
PPFIA3-204ENST00000602492 CRHR2Q13324 411 aa25.4■■□□□ 1.66
PPFIA3-204ENST00000602492 PRPF38BQ5VTL8 546 aaKnown RBP25.4■■□□□ 1.66
PPFIA3-204ENST00000602492 OTOP1Q7RTM1 612 aa25.4■■□□□ 1.66
PPFIA3-204ENST00000602492 OPTNQ96CV9 577 aa25.4■■□□□ 1.66
PPFIA3-204ENST00000602492 ERO1AQ96HE7 468 aa25.4■■□□□ 1.66
PPFIA3-204ENST00000602492 TMEM39BQ9GZU3 492 aa25.4■■□□□ 1.66
PPFIA3-204ENST00000602492 OTOFQ9HC10 1997 aa25.39■■□□□ 1.66
PPFIA3-204ENST00000602492 TESPA1A2RU30 521 aaPredicted RBP25.39■■□□□ 1.66
PPFIA3-204ENST00000602492 PDE8BO95263 885 aa25.39■■□□□ 1.66
PPFIA3-204ENST00000602492 HDLBPQ00341 1268 aaKnown RBP25.39■■□□□ 1.66
PPFIA3-204ENST00000602492 GRIK5Q16478 980 aa25.39■■□□□ 1.66
PPFIA3-204ENST00000602492 CDAN1Q8IWY9 1227 aa25.39■■□□□ 1.66
PPFIA3-204ENST00000602492 VGLL2Q8N8G2 317 aa25.38■■□□□ 1.65
PPFIA3-204ENST00000602492 PTPN18Q99952 460 aa25.38■■□□□ 1.65
PPFIA3-204ENST00000602492 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.37■■□□□ 1.65
PPFIA3-204ENST00000602492 TEKT1Q969V4 418 aa25.37■■□□□ 1.65
PPFIA3-204ENST00000602492 MAP3K9P80192 1104 aa25.36■■□□□ 1.65
PPFIA3-204ENST00000602492 KLHDC4Q8TBB5 520 aa25.36■■□□□ 1.65
PPFIA3-204ENST00000602492 CD99L2Q8TCZ2 262 aa25.36■■□□□ 1.65
PPFIA3-204ENST00000602492 CSADQ9Y600 493 aa25.36■■□□□ 1.65
PPFIA3-204ENST00000602492 E9PSI1 815 aa25.35■■□□□ 1.65
PPFIA3-204ENST00000602492 BCAMP50895 628 aa25.35■■□□□ 1.65
PPFIA3-204ENST00000602492 VGLL4Q14135 290 aa25.35■■□□□ 1.65
PPFIA3-204ENST00000602492 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.35■■□□□ 1.65
PPFIA3-204ENST00000602492 SSH1Q8WYL5 1049 aa25.35■■□□□ 1.65
PPFIA3-204ENST00000602492 MS4A4AQ96JQ5 239 aa25.35■■□□□ 1.65
PPFIA3-204ENST00000602492 TMOD2Q9NZR1 351 aa25.35■■□□□ 1.65
PPFIA3-204ENST00000602492 IFIT1P09914 478 aaKnown RBP25.34■■□□□ 1.65
PPFIA3-204ENST00000602492 SP3Q02447 781 aa25.34■■□□□ 1.65
PPFIA3-204ENST00000602492 PUM3Q15397 648 aaKnown RBP25.34■■□□□ 1.65
PPFIA3-204ENST00000602492 INTS3Q68E01 1043 aaKnown RBP25.34■■□□□ 1.65
PPFIA3-204ENST00000602492 CNKSR2Q8WXI2 1034 aa25.34■■□□□ 1.65
PPFIA3-204ENST00000602492 USP44Q9H0E7 712 aa25.34■■□□□ 1.65
PPFIA3-204ENST00000602492 EFCC1Q9HA90 598 aa25.34■■□□□ 1.65
PPFIA3-204ENST00000602492 MAST3O60307 1309 aa25.34■■□□□ 1.65
PPFIA3-204ENST00000602492 KIF16BQ96L93 1317 aa25.34■■□□□ 1.65
PPFIA3-204ENST00000602492 GTF2A2P52657 109 aa25.33■■□□□ 1.65
PPFIA3-204ENST00000602492 CACNB3P54284 484 aa25.33■■□□□ 1.65
PPFIA3-204ENST00000602492 BRI3BPQ8WY22 251 aa25.33■■□□□ 1.65
PPFIA3-204ENST00000602492 ZDHHC15Q96MV8 337 aa25.33■■□□□ 1.65
PPFIA3-204ENST00000602492 MRIQ9BWK5 157 aa25.33■■□□□ 1.65
PPFIA3-204ENST00000602492 PTPN22Q9Y2R2 807 aa25.33■■□□□ 1.65
PPFIA3-204ENST00000602492 SUGT1Q9Y2Z0 365 aa25.33■■□□□ 1.65
PPFIA3-204ENST00000602492 KIAA0100Q14667 2235 aaKnown RBP25.33■■□□□ 1.65
PPFIA3-204ENST00000602492 CCL15-CCL14A0A0B4J2E2 113 aa25.32■■□□□ 1.64
PPFIA3-204ENST00000602492 CCL15Q16663 113 aa25.32■■□□□ 1.64
PPFIA3-204ENST00000602492 FGFR2P21802 821 aa25.31■■□□□ 1.64
PPFIA3-204ENST00000602492 OTUD5Q96G74 571 aa25.31■■□□□ 1.64
PPFIA3-204ENST00000602492 TAF1CQ15572 869 aaPredicted RBP25.3■■□□□ 1.64
PPFIA3-204ENST00000602492 FKBP1CQ5VVH2 108 aa25.3■■□□□ 1.64
PPFIA3-204ENST00000602492 FAM83AQ86UY5 434 aa25.3■■□□□ 1.64
PPFIA3-204ENST00000602492 HOOK2Q96ED9 719 aa25.3■■□□□ 1.64
PPFIA3-204ENST00000602492 ZFYVE28Q9HCC9 887 aa25.3■■□□□ 1.64
PPFIA3-204ENST00000602492 CENPFP49454 3210 aa25.29■■□□□ 1.64
PPFIA3-204ENST00000602492 EYA2O00167 538 aa25.29■■□□□ 1.64
PPFIA3-204ENST00000602492 SLC5A1P13866 664 aa25.29■■□□□ 1.64
PPFIA3-204ENST00000602492 APOBEC3HQ6NTF7 200 aaKnown RBP25.29■■□□□ 1.64
PPFIA3-204ENST00000602492 HHIPL2Q6UWX4 724 aa25.29■■□□□ 1.64
PPFIA3-204ENST00000602492 SPDYE5A6NIY4 337 aa25.28■■□□□ 1.64
PPFIA3-204ENST00000602492 RFX5P48382 616 aaPredicted RBP25.28■■□□□ 1.64
PPFIA3-204ENST00000602492 SLFN5Q08AF3 891 aa25.28■■□□□ 1.64
PPFIA3-204ENST00000602492 ARHGEF6Q15052 776 aa25.28■■□□□ 1.64
PPFIA3-204ENST00000602492 ALDH1L2Q3SY69 923 aa25.28■■□□□ 1.64
PPFIA3-204ENST00000602492 LPIN2Q92539 896 aa25.28■■□□□ 1.64
PPFIA3-204ENST00000602492 WRNIP1Q96S55 665 aa25.28■■□□□ 1.64
PPFIA3-204ENST00000602492 POTEFA5A3E0 1075 aa25.27■■□□□ 1.64
PPFIA3-204ENST00000602492 WDHD1O75717 1129 aaPredicted RBP25.27■■□□□ 1.64
PPFIA3-204ENST00000602492 ERO1BQ86YB8 467 aa25.27■■□□□ 1.64
PPFIA3-204ENST00000602492 FAM43AQ8N2R8 423 aa25.27■■□□□ 1.64
PPFIA3-204ENST00000602492 WDR66Q8TBY9 1149 aa25.27■■□□□ 1.64
PPFIA3-204ENST00000602492 ARMC5Q96C12 935 aa25.27■■□□□ 1.64
PPFIA3-204ENST00000602492 SNCAIPQ9Y6H5 919 aa25.27■■□□□ 1.64
PPFIA3-204ENST00000602492 DCAF15Q66K64 600 aa25.26■■□□□ 1.63
PPFIA3-204ENST00000602492 SMC4Q9NTJ3 1288 aa25.26■■□□□ 1.63
PPFIA3-204ENST00000602492 RPAP1Q9BWH6 1393 aaPredicted RBP25.26■■□□□ 1.63
PPFIA3-204ENST00000602492 CETPP11597 493 aa25.25■■□□□ 1.63
PPFIA3-204ENST00000602492 CAP1Q01518 475 aa25.25■■□□□ 1.63
PPFIA3-204ENST00000602492 DIEXFQ68CQ4 756 aaKnown RBP25.25■■□□□ 1.63
PPFIA3-204ENST00000602492 ZKSCAN4Q969J2 545 aaPredicted RBP25.24■■□□□ 1.63
PPFIA3-204ENST00000602492 PCDH10Q9P2E7 1040 aa25.24■■□□□ 1.63
PPFIA3-204ENST00000602492 MKI67P46013 3256 aaKnown RBP25.24■■□□□ 1.63
PPFIA3-204ENST00000602492 UBTFL1P0CB47 393 aaPredicted RBP25.23■■□□□ 1.63
PPFIA3-204ENST00000602492 PPIL2Q13356 520 aa25.23■■□□□ 1.63
PPFIA3-204ENST00000602492 SNAPC2Q13487 334 aa25.23■■□□□ 1.63
PPFIA3-204ENST00000602492 ATG9AQ7Z3C6 839 aa25.23■■□□□ 1.63
PPFIA3-204ENST00000602492 ZNF341Q9BYN7 854 aa25.23■■□□□ 1.63
PPFIA3-204ENST00000602492 ZCCHC17Q9NP64 241 aaKnown RBP25.23■■□□□ 1.63
PPFIA3-204ENST00000602492 MYH13Q9UKX3 1938 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 705.3 ms