RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 RASA3Q14644 834 aa16.6■□□□□ 0.25
APOC1-209ENST00000592885 DZIP1LQ8IYY4 767 aaKnown RBP16.6■□□□□ 0.25
APOC1-209ENST00000592885 KLHDC4Q8TBB5 520 aa16.6■□□□□ 0.25
APOC1-209ENST00000592885 ZNF70Q9UC06 446 aaPredicted RBP16.6■□□□□ 0.25
APOC1-209ENST00000592885 CIAO1O76071 339 aa16.59■□□□□ 0.25
APOC1-209ENST00000592885 SLC5A1P13866 664 aa16.59■□□□□ 0.25
APOC1-209ENST00000592885 TNNI2P48788 182 aa16.59■□□□□ 0.25
APOC1-209ENST00000592885 PKN2Q16513 984 aaKnown RBP16.59■□□□□ 0.25
APOC1-209ENST00000592885 NBPF12Q5TAG4 269 aaPredicted RBP16.59■□□□□ 0.25
APOC1-209ENST00000592885 LPIN2Q92539 896 aa16.59■□□□□ 0.25
APOC1-209ENST00000592885 SLC10A4Q96EP9 437 aa16.59■□□□□ 0.25
APOC1-209ENST00000592885 MRIQ9BWK5 157 aa16.59■□□□□ 0.25
APOC1-209ENST00000592885 AOX1Q06278 1338 aa16.59■□□□□ 0.25
APOC1-209ENST00000592885 CHAF1AQ13111 956 aaPredicted RBP16.58■□□□□ 0.24
APOC1-209ENST00000592885 ANKRD13AQ8IZ07 590 aa16.58■□□□□ 0.24
APOC1-209ENST00000592885 ARHGAP45Q92619 1136 aa16.58■□□□□ 0.24
APOC1-209ENST00000592885 TEKT1Q969V4 418 aa16.58■□□□□ 0.24
APOC1-209ENST00000592885 WNK4Q96J92 1243 aa16.58■□□□□ 0.24
APOC1-209ENST00000592885 TDRD3Q9H7E2 651 aaKnown RBP16.58■□□□□ 0.24
APOC1-209ENST00000592885 NOB1Q9ULX3 412 aaKnown RBP16.58■□□□□ 0.24
APOC1-209ENST00000592885 ZBTB22O15209 634 aa16.57■□□□□ 0.24
APOC1-209ENST00000592885 BCAMP50895 628 aa16.57■□□□□ 0.24
APOC1-209ENST00000592885 MKRN3Q13064 507 aaKnown RBP16.57■□□□□ 0.24
APOC1-209ENST00000592885 ZNF296Q8WUU4 475 aaPredicted RBP16.57■□□□□ 0.24
APOC1-209ENST00000592885 IQSEC3Q9UPP2 1182 aaPredicted RBP16.57■□□□□ 0.24
APOC1-209ENST00000592885 RPAP1Q9BWH6 1393 aaPredicted RBP16.56■□□□□ 0.24
APOC1-209ENST00000592885 GPR25O00155 361 aa16.56■□□□□ 0.24
APOC1-209ENST00000592885 USP2O75604 605 aaPredicted RBP16.56■□□□□ 0.24
APOC1-209ENST00000592885 TBC1D8O95759 1140 aa16.56■□□□□ 0.24
APOC1-209ENST00000592885 RARSP54136 660 aaKnown RBP16.56■□□□□ 0.24
APOC1-209ENST00000592885 MLLT1Q03111 559 aaPredicted RBP16.56■□□□□ 0.24
APOC1-209ENST00000592885 ATG9AQ7Z3C6 839 aa16.56■□□□□ 0.24
APOC1-209ENST00000592885 WDR66Q8TBY9 1149 aa16.56■□□□□ 0.24
APOC1-209ENST00000592885 CLMNQ96JQ2 1002 aa16.56■□□□□ 0.24
APOC1-209ENST00000592885 ZDHHC15Q96MV8 337 aa16.56■□□□□ 0.24
APOC1-209ENST00000592885 TEPSINQ96N21 525 aa16.56■□□□□ 0.24
APOC1-209ENST00000592885 TMOD2Q9NZR1 351 aa16.56■□□□□ 0.24
APOC1-209ENST00000592885 FZD1Q9UP38 647 aa16.56■□□□□ 0.24
APOC1-209ENST00000592885 FKBP1CQ5VVH2 108 aa16.55■□□□□ 0.24
APOC1-209ENST00000592885 HHIPL2Q6UWX4 724 aa16.55■□□□□ 0.24
APOC1-209ENST00000592885 HOOK2Q96ED9 719 aa16.55■□□□□ 0.24
APOC1-209ENST00000592885 IL15P40933 162 aaPredicted RBP16.54■□□□□ 0.24
APOC1-209ENST00000592885 GRIK5Q16478 980 aa16.54■□□□□ 0.24
APOC1-209ENST00000592885 INTS3Q68E01 1043 aaKnown RBP16.54■□□□□ 0.24
APOC1-209ENST00000592885 FAM83AQ86UY5 434 aa16.54■□□□□ 0.24
APOC1-209ENST00000592885 IFNL1Q8IU54 200 aa16.54■□□□□ 0.24
APOC1-209ENST00000592885 GNL3LQ9NVN8 582 aaKnown RBP16.54■□□□□ 0.24
APOC1-209ENST00000592885 CEP126Q9P2H0 1117 aa16.54■□□□□ 0.24
APOC1-209ENST00000592885 LRRFIP2Q9Y608 721 aaKnown RBP16.54■□□□□ 0.24
APOC1-209ENST00000592885 TCP10L2B9ZVM9 353 aa16.53■□□□□ 0.24
APOC1-209ENST00000592885 SEMA3EO15041 775 aa16.53■□□□□ 0.24
APOC1-209ENST00000592885 FKTNO75072 461 aa16.53■□□□□ 0.24
APOC1-209ENST00000592885 GNAI3P08754 354 aa16.53■□□□□ 0.24
APOC1-209ENST00000592885 ATP2B3Q16720 1220 aa16.53■□□□□ 0.24
APOC1-209ENST00000592885 OTUD7BQ6GQQ9 843 aa16.53■□□□□ 0.24
APOC1-209ENST00000592885 TMEM39BQ9GZU3 492 aa16.53■□□□□ 0.24
APOC1-209ENST00000592885 COPRSQ9NQ92 184 aa16.53■□□□□ 0.24
APOC1-209ENST00000592885 SALL1Q9NSC2 1324 aa16.52■□□□□ 0.24
APOC1-209ENST00000592885 TESPA1A2RU30 521 aaPredicted RBP16.52■□□□□ 0.24
APOC1-209ENST00000592885 IPO8O15397 1037 aaKnown RBP16.52■□□□□ 0.24
APOC1-209ENST00000592885 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.52■□□□□ 0.244e-15■■■□□ 17.6
APOC1-209ENST00000592885 MEIS3Q99687 375 aa16.52■□□□□ 0.24
APOC1-209ENST00000592885 SIL1Q9H173 461 aa16.52■□□□□ 0.24
APOC1-209ENST00000592885 IGF2BP3O00425 579 aaKnown RBP eCLIP16.51■□□□□ 0.23
APOC1-209ENST00000592885 MTX1Q13505 466 aa16.51■□□□□ 0.23
APOC1-209ENST00000592885 APOBEC3HQ6NTF7 200 aaKnown RBP16.51■□□□□ 0.23
APOC1-209ENST00000592885 OPTNQ96CV9 577 aa16.51■□□□□ 0.23
APOC1-209ENST00000592885 CSADQ9Y600 493 aa16.51■□□□□ 0.23
APOC1-209ENST00000592885 PDS5AQ29RF7 1337 aaKnown RBP16.5■□□□□ 0.23
APOC1-209ENST00000592885 GJA5P36382 358 aa16.5■□□□□ 0.23
APOC1-209ENST00000592885 MAP3K9P80192 1104 aa16.5■□□□□ 0.23
APOC1-209ENST00000592885 VGLL4Q14135 290 aa16.5■□□□□ 0.23
APOC1-209ENST00000592885 FBXO46Q6PJ61 603 aaPredicted RBP16.5■□□□□ 0.23
APOC1-209ENST00000592885 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.5■□□□□ 0.23
APOC1-209ENST00000592885 ELP3Q9H9T3 547 aa16.5■□□□□ 0.23
APOC1-209ENST00000592885 DENND2AQ9ULE3 1009 aa16.5■□□□□ 0.23
APOC1-209ENST00000592885 HPS5Q9UPZ3 1129 aa16.5■□□□□ 0.23
APOC1-209ENST00000592885 DCAF15Q66K64 600 aa16.49■□□□□ 0.23
APOC1-209ENST00000592885 CDAN1Q8IWY9 1227 aa16.49■□□□□ 0.23
APOC1-209ENST00000592885 ZGPATQ8N5A5 531 aaKnown RBP16.49■□□□□ 0.23
APOC1-209ENST00000592885 LDHBP07195 334 aaKnown RBP16.48■□□□□ 0.23
APOC1-209ENST00000592885 GTF2A2P52657 109 aa16.48■□□□□ 0.23
APOC1-209ENST00000592885 CACNB3P54284 484 aa16.48■□□□□ 0.23
APOC1-209ENST00000592885 R3HDMLQ9H3Y0 253 aa16.48■□□□□ 0.23
APOC1-209ENST00000592885 PA2G4Q9UQ80 394 aaKnown RBP16.48■□□□□ 0.23
APOC1-209ENST00000592885 DAGLAQ9Y4D2 1042 aa16.48■□□□□ 0.23
APOC1-209ENST00000592885 SPDYE5A6NIY4 337 aa16.47■□□□□ 0.23
APOC1-209ENST00000592885 SRGAP3O43295 1099 aa16.47■□□□□ 0.23
APOC1-209ENST00000592885 TRIM27P14373 513 aa16.47■□□□□ 0.23
APOC1-209ENST00000592885 PRDX5P30044 214 aa16.47■□□□□ 0.23
APOC1-209ENST00000592885 ATF7IPQ6VMQ6 1270 aa16.47■□□□□ 0.23
APOC1-209ENST00000592885 FAM151AQ8WW52 585 aa16.47■□□□□ 0.23
APOC1-209ENST00000592885 ERO1AQ96HE7 468 aa16.47■□□□□ 0.23
APOC1-209ENST00000592885 MS4A4AQ96JQ5 239 aa16.47■□□□□ 0.23
APOC1-209ENST00000592885 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.47■□□□□ 0.23
APOC1-209ENST00000592885 AKAP2Q9Y2D5 859 aa16.47■□□□□ 0.23
APOC1-209ENST00000592885 DOCK2Q92608 1830 aa16.47■□□□□ 0.23
APOC1-209ENST00000592885 PHKA1P46020 1223 aa16.46■□□□□ 0.23
APOC1-209ENST00000592885 CRHR2Q13324 411 aa16.46■□□□□ 0.23
APOC1-209ENST00000592885 CCDC102BQ68D86 513 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms