RNA–Protein interactions for RNA: ENST00000592314.5

SF3A2-206, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 5

Gene SF3A2, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-206ENST00000592314 EFCC1Q9HA90 598 aa18.82■□□□□ 0.6
SF3A2-206ENST00000592314 GRM8O00222 908 aa18.81■□□□□ 0.6
SF3A2-206ENST00000592314 SP3Q02447 781 aa18.81■□□□□ 0.6
SF3A2-206ENST00000592314 VGLL4Q14135 290 aa18.81■□□□□ 0.6
SF3A2-206ENST00000592314 INTS3Q68E01 1043 aaKnown RBP18.81■□□□□ 0.6
SF3A2-206ENST00000592314 FAM84BQ96KN1 310 aaPredicted RBP18.81■□□□□ 0.6
SF3A2-206ENST00000592314 CNNM1Q9NRU3 951 aa18.81■□□□□ 0.6
SF3A2-206ENST00000592314 TTF2Q9UNY4 1162 aaKnown RBP18.81■□□□□ 0.6
SF3A2-206ENST00000592314 TRIOBPQ9H2D6 2365 aa18.81■□□□□ 0.6
SF3A2-206ENST00000592314 DZIP1LQ8IYY4 767 aaKnown RBP18.8■□□□□ 0.6
SF3A2-206ENST00000592314 SERPINA10Q9UK55 444 aa18.8■□□□□ 0.6
SF3A2-206ENST00000592314 TCP10L2B9ZVM9 353 aa18.79■□□□□ 0.6
SF3A2-206ENST00000592314 CCDC57Q2TAC2 916 aa18.79■□□□□ 0.6
SF3A2-206ENST00000592314 FAM43AQ8N2R8 423 aa18.79■□□□□ 0.6
SF3A2-206ENST00000592314 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.79■□□□□ 0.6
SF3A2-206ENST00000592314 ZNF333Q96JL9 665 aa18.79■□□□□ 0.6
SF3A2-206ENST00000592314 SALL2Q9Y467 1007 aaPredicted RBP18.79■□□□□ 0.6
SF3A2-206ENST00000592314 MYH13Q9UKX3 1938 aa18.78■□□□□ 0.6
SF3A2-206ENST00000592314 CACNB3P54284 484 aa18.78■□□□□ 0.6
SF3A2-206ENST00000592314 NCBP3Q53F19 620 aaKnown RBP18.78■□□□□ 0.6
SF3A2-206ENST00000592314 TAF7LQ5H9L4 462 aa18.78■□□□□ 0.6
SF3A2-206ENST00000592314 OTUD7BQ6GQQ9 843 aa18.78■□□□□ 0.6
SF3A2-206ENST00000592314 GCC1Q96CN9 775 aa18.78■□□□□ 0.6
SF3A2-206ENST00000592314 SUCLG2Q96I99 432 aa18.78■□□□□ 0.6
SF3A2-206ENST00000592314 IQSEC3Q9UPP2 1182 aaPredicted RBP18.78■□□□□ 0.6
SF3A2-206ENST00000592314 PTCH2Q9Y6C5 1203 aa18.78■□□□□ 0.6
SF3A2-206ENST00000592314 CCL15-CCL14A0A0B4J2E2 113 aa18.77■□□□□ 0.6
SF3A2-206ENST00000592314 HIBADHP31937 336 aaKnown RBP18.77■□□□□ 0.6
SF3A2-206ENST00000592314 CRKP46108 304 aa18.77■□□□□ 0.6
SF3A2-206ENST00000592314 TNFAIP1Q13829 316 aa18.77■□□□□ 0.6
SF3A2-206ENST00000592314 UBE4AQ14139 1066 aa18.77■□□□□ 0.6
SF3A2-206ENST00000592314 CCL15Q16663 113 aa18.77■□□□□ 0.6
SF3A2-206ENST00000592314 DIEXFQ68CQ4 756 aaKnown RBP18.77■□□□□ 0.6
SF3A2-206ENST00000592314 ARHGAP39Q9C0H5 1083 aa18.77■□□□□ 0.6
SF3A2-206ENST00000592314 TAF1CQ15572 869 aaPredicted RBP18.76■□□□□ 0.59
SF3A2-206ENST00000592314 WDR63Q8IWG1 891 aa18.76■□□□□ 0.59
SF3A2-206ENST00000592314 OTUD5Q96G74 571 aa18.76■□□□□ 0.59
SF3A2-206ENST00000592314 RIPOR2Q9Y4F9 1068 aa18.76■□□□□ 0.59
SF3A2-206ENST00000592314 SNCAIPQ9Y6H5 919 aa18.76■□□□□ 0.59
SF3A2-206ENST00000592314 NBPF7P0C2Y1 421 aaPredicted RBP18.75■□□□□ 0.59
SF3A2-206ENST00000592314 FXR1P51114 621 aaKnown RBP eCLIP18.74■□□□□ 0.59
SF3A2-206ENST00000592314 MAP3K9P80192 1104 aa18.74■□□□□ 0.59
SF3A2-206ENST00000592314 LRRC24Q50LG9 513 aa18.74■□□□□ 0.59
SF3A2-206ENST00000592314 FBXO33Q7Z6M2 555 aa18.74■□□□□ 0.59
SF3A2-206ENST00000592314 VGLL2Q8N8G2 317 aa18.74■□□□□ 0.59
SF3A2-206ENST00000592314 C9orf78Q9NZ63 289 aaPredicted RBP18.74■□□□□ 0.59
SF3A2-206ENST00000592314 LAMA3Q16787 3333 aa18.74■□□□□ 0.59
SF3A2-206ENST00000592314 SPDYE5A6NIY4 337 aa18.73■□□□□ 0.59
SF3A2-206ENST00000592314 ALDH1L1O75891 902 aa18.73■□□□□ 0.59
SF3A2-206ENST00000592314 GTF2A2P52657 109 aa18.73■□□□□ 0.59
SF3A2-206ENST00000592314 SLC4A10Q6U841 1118 aa18.73■□□□□ 0.59
SF3A2-206ENST00000592314 MYCP01106 439 aaPredicted RBP18.72■□□□□ 0.59
SF3A2-206ENST00000592314 CHAF1AQ13111 956 aaPredicted RBP18.72■□□□□ 0.59
SF3A2-206ENST00000592314 SLC9C1Q4G0N8 1177 aa18.72■□□□□ 0.59
SF3A2-206ENST00000592314 ANKRD44Q8N8A2 993 aa18.72■□□□□ 0.59
SF3A2-206ENST00000592314 BICC1Q9H694 974 aaKnown RBP18.72■□□□□ 0.59
SF3A2-206ENST00000592314 ZFYVE28Q9HCC9 887 aa18.72■□□□□ 0.59
SF3A2-206ENST00000592314 UTYO14607 1347 aa18.72■□□□□ 0.59
SF3A2-206ENST00000592314 CTGFP29279 349 aa18.71■□□□□ 0.59
SF3A2-206ENST00000592314 RABL6Q3YEC7 729 aaPredicted RBP18.71■□□□□ 0.59
SF3A2-206ENST00000592314 SH3TC2Q8TF17 1288 aa18.71■□□□□ 0.59
SF3A2-206ENST00000592314 ZKSCAN4Q969J2 545 aaPredicted RBP18.71■□□□□ 0.59
SF3A2-206ENST00000592314 SRCIN1Q9C0H9 1055 aa18.71■□□□□ 0.59
SF3A2-206ENST00000592314 MRS2Q9HD23 443 aa18.71■□□□□ 0.59
SF3A2-206ENST00000592314 CSADQ9Y600 493 aa18.71■□□□□ 0.59
SF3A2-206ENST00000592314 MROH5Q6ZUA9 1318 aa18.71■□□□□ 0.59
SF3A2-206ENST00000592314 BTBD19C9JJ37 291 aa18.7■□□□□ 0.58
SF3A2-206ENST00000592314 IRF6O14896 467 aa18.7■□□□□ 0.58
SF3A2-206ENST00000592314 APOBEC3HQ6NTF7 200 aaKnown RBP18.7■□□□□ 0.58
SF3A2-206ENST00000592314 KLHDC4Q8TBB5 520 aa18.7■□□□□ 0.58
SF3A2-206ENST00000592314 WRNIP1Q96S55 665 aa18.7■□□□□ 0.58
SF3A2-206ENST00000592314 TLR2O60603 784 aa18.69■□□□□ 0.58
SF3A2-206ENST00000592314 TNNI2P48788 182 aa18.69■□□□□ 0.58
SF3A2-206ENST00000592314 LACTBP83111 547 aaPredicted RBP18.69■□□□□ 0.58
SF3A2-206ENST00000592314 HDLBPQ00341 1268 aaKnown RBP18.69■□□□□ 0.58
SF3A2-206ENST00000592314 ZDHHC15Q96MV8 337 aa18.69■□□□□ 0.58
SF3A2-206ENST00000592314 COLQQ9Y215 455 aaPredicted RBP18.69■□□□□ 0.58
SF3A2-206ENST00000592314 MGAMO43451 1857 aa18.69■□□□□ 0.58
SF3A2-206ENST00000592314 RPAP1Q9BWH6 1393 aaPredicted RBP18.68■□□□□ 0.58
SF3A2-206ENST00000592314 BCAMP50895 628 aa18.68■□□□□ 0.58
SF3A2-206ENST00000592314 ERO1BQ86YB8 467 aa18.68■□□□□ 0.58
SF3A2-206ENST00000592314 TEKT1Q969V4 418 aa18.68■□□□□ 0.58
SF3A2-206ENST00000592314 SHISA4Q96DD7 197 aa18.68■□□□□ 0.58
SF3A2-206ENST00000592314 TMEM106CQ9BVX2 250 aa18.68■□□□□ 0.58
SF3A2-206ENST00000592314 COL6A3P12111 3177 aa18.67■□□□□ 0.58
SF3A2-206ENST00000592314 AK9Q5TCS8 1911 aa18.67■□□□□ 0.58
SF3A2-206ENST00000592314 ECM2O94769 699 aaPredicted RBP18.67■□□□□ 0.58
SF3A2-206ENST00000592314 INPP5BP32019 993 aa18.67■□□□□ 0.58
SF3A2-206ENST00000592314 METTL24Q5JXM2 366 aa18.67■□□□□ 0.58
SF3A2-206ENST00000592314 ADGRA2Q96PE1 1338 aa18.67■□□□□ 0.58
SF3A2-206ENST00000592314 DOCK2Q92608 1830 aa18.67■□□□□ 0.58
SF3A2-206ENST00000592314 PTPRFP10586 1907 aa18.66■□□□□ 0.58
SF3A2-206ENST00000592314 PDE8BO95263 885 aa18.66■□□□□ 0.58
SF3A2-206ENST00000592314 CETPP11597 493 aa18.66■□□□□ 0.58
SF3A2-206ENST00000592314 PPIL2Q13356 520 aa18.66■□□□□ 0.58
SF3A2-206ENST00000592314 FAM83AQ86UY5 434 aa18.66■□□□□ 0.58
SF3A2-206ENST00000592314 VPS37DQ86XT2 251 aa18.66■□□□□ 0.58
SF3A2-206ENST00000592314 TBC1D22AQ8WUA7 517 aa18.66■□□□□ 0.58
SF3A2-206ENST00000592314 FGFR2P21802 821 aa18.65■□□□□ 0.58
SF3A2-206ENST00000592314 SNAPC2Q13487 334 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms