RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 CTU1Q7Z7A3 348 aaKnown RBP15.28■□□□□ 0.04
VAT1-206ENST00000589709 ARHGAP45Q92619 1136 aa15.28■□□□□ 0.04
VAT1-206ENST00000589709 TDRD3Q9H7E2 651 aaKnown RBP15.28■□□□□ 0.04
VAT1-206ENST00000589709 IQSEC3Q9UPP2 1182 aaPredicted RBP15.28■□□□□ 0.04
VAT1-206ENST00000589709 ECM29Q5VYK3 1845 aa15.27■□□□□ 0.04
VAT1-206ENST00000589709 MANSC4A6NHS7 340 aaPredicted RBP15.27■□□□□ 0.04
VAT1-206ENST00000589709 USP2O75604 605 aaPredicted RBP15.27■□□□□ 0.04
VAT1-206ENST00000589709 CIAO1O76071 339 aa15.27■□□□□ 0.04
VAT1-206ENST00000589709 ALDH1A1P00352 501 aa15.27■□□□□ 0.04
VAT1-206ENST00000589709 IREB2P48200 963 aaKnown RBP15.27■□□□□ 0.04
VAT1-206ENST00000589709 RARSP54136 660 aaKnown RBP15.27■□□□□ 0.04
VAT1-206ENST00000589709 MKRN3Q13064 507 aaKnown RBP15.27■□□□□ 0.04
VAT1-206ENST00000589709 CHAF1AQ13111 956 aaPredicted RBP15.27■□□□□ 0.04
VAT1-206ENST00000589709 GRIK5Q16478 980 aa15.27■□□□□ 0.04
VAT1-206ENST00000589709 ATG9AQ7Z3C6 839 aa15.27■□□□□ 0.04
VAT1-206ENST00000589709 LPIN2Q92539 896 aa15.27■□□□□ 0.04
VAT1-206ENST00000589709 FZD1Q9UP38 647 aa15.27■□□□□ 0.04
VAT1-206ENST00000589709 TBC1D8O95759 1140 aa15.26■□□□□ 0.03
VAT1-206ENST00000589709 SLC5A1P13866 664 aa15.26■□□□□ 0.03
VAT1-206ENST00000589709 TNNI2P48788 182 aa15.26■□□□□ 0.03
VAT1-206ENST00000589709 ANKRD13AQ8IZ07 590 aa15.26■□□□□ 0.03
VAT1-206ENST00000589709 TEKT1Q969V4 418 aa15.26■□□□□ 0.03
VAT1-206ENST00000589709 WNK4Q96J92 1243 aa15.26■□□□□ 0.03
VAT1-206ENST00000589709 CLMNQ96JQ2 1002 aa15.26■□□□□ 0.03
VAT1-206ENST00000589709 TEPSINQ96N21 525 aa15.26■□□□□ 0.03
VAT1-206ENST00000589709 GPR25O00155 361 aa15.25■□□□□ 0.03
VAT1-206ENST00000589709 PKN2Q16513 984 aaKnown RBP15.25■□□□□ 0.03
VAT1-206ENST00000589709 INTS3Q68E01 1043 aaKnown RBP15.25■□□□□ 0.03
VAT1-206ENST00000589709 ZNF296Q8WUU4 475 aaPredicted RBP15.25■□□□□ 0.03
VAT1-206ENST00000589709 ZDHHC15Q96MV8 337 aa15.25■□□□□ 0.03
VAT1-206ENST00000589709 MAST3O60307 1309 aa15.24■□□□□ 0.03
VAT1-206ENST00000589709 ZBTB22O15209 634 aa15.24■□□□□ 0.03
VAT1-206ENST00000589709 FKBP1CQ5VVH2 108 aa15.24■□□□□ 0.03
VAT1-206ENST00000589709 HHIPL2Q6UWX4 724 aa15.24■□□□□ 0.03
VAT1-206ENST00000589709 WDR66Q8TBY9 1149 aa15.24■□□□□ 0.03
VAT1-206ENST00000589709 COPRSQ9NQ92 184 aa15.24■□□□□ 0.03
VAT1-206ENST00000589709 CEP126Q9P2H0 1117 aa15.24■□□□□ 0.03
VAT1-206ENST00000589709 LRRFIP2Q9Y608 721 aaKnown RBP15.24■□□□□ 0.03
VAT1-206ENST00000589709 ARAP2Q8WZ64 1704 aa15.23■□□□□ 0.03
VAT1-206ENST00000589709 TCP10L2B9ZVM9 353 aa15.23■□□□□ 0.03
VAT1-206ENST00000589709 IL15P40933 162 aaPredicted RBP15.23■□□□□ 0.03
VAT1-206ENST00000589709 MLLT1Q03111 559 aaPredicted RBP15.23■□□□□ 0.03
VAT1-206ENST00000589709 APOBEC3HQ6NTF7 200 aaKnown RBP15.23■□□□□ 0.03
VAT1-206ENST00000589709 FAM83AQ86UY5 434 aa15.23■□□□□ 0.03
VAT1-206ENST00000589709 IFNL1Q8IU54 200 aa15.23■□□□□ 0.03
VAT1-206ENST00000589709 TESPA1A2RU30 521 aaPredicted RBP15.22■□□□□ 0.03
VAT1-206ENST00000589709 IPO8O15397 1037 aaKnown RBP15.22■□□□□ 0.03
VAT1-206ENST00000589709 GNAI3P08754 354 aa15.22■□□□□ 0.03
VAT1-206ENST00000589709 ATP2B3Q16720 1220 aa15.22■□□□□ 0.03
VAT1-206ENST00000589709 MEIS3Q99687 375 aa15.22■□□□□ 0.03
VAT1-206ENST00000589709 TMEM39BQ9GZU3 492 aa15.22■□□□□ 0.03
VAT1-206ENST00000589709 SIL1Q9H173 461 aa15.22■□□□□ 0.03
VAT1-206ENST00000589709 R3HDMLQ9H3Y0 253 aa15.22■□□□□ 0.03
VAT1-206ENST00000589709 GNL3LQ9NVN8 582 aaKnown RBP15.22■□□□□ 0.03
VAT1-206ENST00000589709 SEMA3EO15041 775 aa15.21■□□□□ 0.03
VAT1-206ENST00000589709 FKTNO75072 461 aa15.21■□□□□ 0.03
VAT1-206ENST00000589709 GJA5P36382 358 aa15.21■□□□□ 0.03
VAT1-206ENST00000589709 MAP3K9P80192 1104 aa15.21■□□□□ 0.03
VAT1-206ENST00000589709 OTUD7BQ6GQQ9 843 aa15.21■□□□□ 0.03
VAT1-206ENST00000589709 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.21■□□□□ 0.03
VAT1-206ENST00000589709 CDAN1Q8IWY9 1227 aa15.21■□□□□ 0.03
VAT1-206ENST00000589709 TMOD2Q9NZR1 351 aa15.21■□□□□ 0.03
VAT1-206ENST00000589709 IGF2BP3O00425 579 aaKnown RBP eCLIP15.2■□□□□ 0.02
VAT1-206ENST00000589709 MTX1Q13505 466 aa15.2■□□□□ 0.02
VAT1-206ENST00000589709 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.2■□□□□ 0.02
VAT1-206ENST00000589709 HOOK2Q96ED9 719 aa15.2■□□□□ 0.02
VAT1-206ENST00000589709 SALL1Q9NSC2 1324 aa15.19■□□□□ 0.02
VAT1-206ENST00000589709 CACNB3P54284 484 aa15.19■□□□□ 0.02
VAT1-206ENST00000589709 OPTNQ96CV9 577 aa15.19■□□□□ 0.02
VAT1-206ENST00000589709 ELP3Q9H9T3 547 aa15.19■□□□□ 0.02
VAT1-206ENST00000589709 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.19■□□□□ 0.02
VAT1-206ENST00000589709 DENND2AQ9ULE3 1009 aa15.19■□□□□ 0.02
VAT1-206ENST00000589709 HPS5Q9UPZ3 1129 aa15.19■□□□□ 0.02
VAT1-206ENST00000589709 PA2G4Q9UQ80 394 aaKnown RBP15.19■□□□□ 0.02
VAT1-206ENST00000589709 VGLL4Q14135 290 aa15.18■□□□□ 0.02
VAT1-206ENST00000589709 FBXO46Q6PJ61 603 aaPredicted RBP15.18■□□□□ 0.02
VAT1-206ENST00000589709 MS4A4AQ96JQ5 239 aa15.18■□□□□ 0.02
VAT1-206ENST00000589709 PTPN18Q99952 460 aa15.18■□□□□ 0.02
VAT1-206ENST00000589709 CSADQ9Y600 493 aa15.18■□□□□ 0.02
VAT1-206ENST00000589709 LAMB1P07942 1786 aa15.17■□□□□ 0.02
VAT1-206ENST00000589709 RPAP1Q9BWH6 1393 aaPredicted RBP15.17■□□□□ 0.02
VAT1-206ENST00000589709 SRGAP3O43295 1099 aa15.17■□□□□ 0.02
VAT1-206ENST00000589709 LDHBP07195 334 aaKnown RBP15.17■□□□□ 0.02
VAT1-206ENST00000589709 TRIM27P14373 513 aa15.17■□□□□ 0.02
VAT1-206ENST00000589709 PHKA1P46020 1223 aa15.17■□□□□ 0.02
VAT1-206ENST00000589709 ATF7IPQ6VMQ6 1270 aa15.17■□□□□ 0.02
VAT1-206ENST00000589709 FAM151AQ8WW52 585 aa15.17■□□□□ 0.02
VAT1-206ENST00000589709 DAGLAQ9Y4D2 1042 aa15.17■□□□□ 0.02
VAT1-206ENST00000589709 SPDYE5A6NIY4 337 aa15.16■□□□□ 0.02
VAT1-206ENST00000589709 PRDX5P30044 214 aa15.16■□□□□ 0.02
VAT1-206ENST00000589709 GTF2A2P52657 109 aa15.16■□□□□ 0.02
VAT1-206ENST00000589709 DCAF15Q66K64 600 aa15.16■□□□□ 0.02
VAT1-206ENST00000589709 CCDC102BQ68D86 513 aa15.16■□□□□ 0.02
VAT1-206ENST00000589709 ZGPATQ8N5A5 531 aaKnown RBP15.16■□□□□ 0.02
VAT1-206ENST00000589709 AKAP2Q9Y2D5 859 aa15.16■□□□□ 0.02
VAT1-206ENST00000589709 PDS5AQ29RF7 1337 aaKnown RBP15.16■□□□□ 0.02
VAT1-206ENST00000589709 BCAR3O75815 825 aa15.15■□□□□ 0.02
VAT1-206ENST00000589709 GNAI2P04899 355 aa15.15■□□□□ 0.02
VAT1-206ENST00000589709 ADORA1P30542 326 aa15.15■□□□□ 0.02
VAT1-206ENST00000589709 TIMM10P62072 90 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms