RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 NSUN4Q96CB9 384 aaKnown RBP13.6□□□□□ -0.23
SMAD4-205ENST00000588745 ARMT1Q9H993 441 aa13.6□□□□□ -0.23
SMAD4-205ENST00000588745 JAG2Q9Y219 1238 aa13.6□□□□□ -0.23
SMAD4-205ENST00000588745 CYP46A1Q9Y6A2 500 aa13.6□□□□□ -0.23
SMAD4-205ENST00000588745 TIAM2Q8IVF5 1701 aa13.6□□□□□ -0.23
SMAD4-205ENST00000588745 CPA1P15085 419 aa13.59□□□□□ -0.23
SMAD4-205ENST00000588745 GNAT2P19087 354 aa13.59□□□□□ -0.23
SMAD4-205ENST00000588745 POLD1P28340 1107 aa13.59□□□□□ -0.23
SMAD4-205ENST00000588745 PRDX5P30044 214 aa13.59□□□□□ -0.23
SMAD4-205ENST00000588745 MECOMQ03112 1051 aa13.59□□□□□ -0.23
SMAD4-205ENST00000588745 R3HDM1Q15032 1099 aaKnown RBP13.59□□□□□ -0.23
SMAD4-205ENST00000588745 TTLL5Q6EMB2 1281 aa13.59□□□□□ -0.23
SMAD4-205ENST00000588745 BLOC1S2Q6QNY1 142 aa13.59□□□□□ -0.23
SMAD4-205ENST00000588745 SPRYD3Q8NCJ5 442 aa13.59□□□□□ -0.23
SMAD4-205ENST00000588745 ZNF384Q8TF68 577 aa13.59□□□□□ -0.23
SMAD4-205ENST00000588745 EYA3Q99504 573 aa13.59□□□□□ -0.23
SMAD4-205ENST00000588745 COA1Q9GZY4 146 aa13.59□□□□□ -0.23
SMAD4-205ENST00000588745 SLKQ9H2G2 1235 aaPredicted RBP13.59□□□□□ -0.23
SMAD4-205ENST00000588745 RIMBP2O15034 1052 aa13.58□□□□□ -0.23
SMAD4-205ENST00000588745 FGAP02671 866 aa13.58□□□□□ -0.23
SMAD4-205ENST00000588745 RPS6KB1P23443 525 aa13.58□□□□□ -0.23
SMAD4-205ENST00000588745 AK2P54819 239 aa13.58□□□□□ -0.23
SMAD4-205ENST00000588745 IMMTQ16891 758 aaKnown RBP13.58□□□□□ -0.23
SMAD4-205ENST00000588745 CC2D2BQ6DHV5 1058 aa13.58□□□□□ -0.23
SMAD4-205ENST00000588745 STOX1Q6ZVD7 989 aa13.58□□□□□ -0.23
SMAD4-205ENST00000588745 DZIP1Q86YF9 867 aaKnown RBP13.58□□□□□ -0.23
SMAD4-205ENST00000588745 MIGA1Q8NAN2 632 aa13.58□□□□□ -0.23
SMAD4-205ENST00000588745 C7orf43Q8WVR3 580 aa13.58□□□□□ -0.23
SMAD4-205ENST00000588745 ZC3H12CQ9C0D7 883 aaKnown RBP13.58□□□□□ -0.23
SMAD4-205ENST00000588745 PDRG1Q9NUG6 133 aa13.58□□□□□ -0.23
SMAD4-205ENST00000588745 FAM205AQ6ZU69 1335 aa13.58□□□□□ -0.24
SMAD4-205ENST00000588745 A0A0G2JLW4 131 aa13.58□□□□□ -0.24
SMAD4-205ENST00000588745 MAGEB6P1A0A0J9YX57 407 aa13.58□□□□□ -0.24
SMAD4-205ENST00000588745 PATL2C9JE40 543 aaKnown RBP13.58□□□□□ -0.24
SMAD4-205ENST00000588745 LDHBP07195 334 aaKnown RBP13.58□□□□□ -0.24
SMAD4-205ENST00000588745 HSP90AA1P07900 732 aaKnown RBP13.58□□□□□ -0.24
SMAD4-205ENST00000588745 ALX1Q15699 326 aa13.58□□□□□ -0.24
SMAD4-205ENST00000588745 TMX3Q96JJ7 454 aa13.58□□□□□ -0.24
SMAD4-205ENST00000588745 NEK1Q96PY6 1258 aa13.58□□□□□ -0.24
SMAD4-205ENST00000588745 RIOK1Q9BRS2 568 aaKnown RBP13.58□□□□□ -0.24
SMAD4-205ENST00000588745 RTFDC1Q9BY42 306 aaPredicted RBP13.58□□□□□ -0.24
SMAD4-205ENST00000588745 EPB41L4AQ9HCS5 686 aaPredicted RBP13.58□□□□□ -0.24
SMAD4-205ENST00000588745 CHD4Q14839 1912 aa13.57□□□□□ -0.24
SMAD4-205ENST00000588745 E7EWF7 191 aa13.57□□□□□ -0.24
SMAD4-205ENST00000588745 APPP05067 770 aa13.57□□□□□ -0.24
SMAD4-205ENST00000588745 DPEP1P16444 411 aa13.57□□□□□ -0.24
SMAD4-205ENST00000588745 NOL8Q76FK4 1167 aaKnown RBP13.57□□□□□ -0.24
SMAD4-205ENST00000588745 IFNL3Q8IZI9 196 aa13.57□□□□□ -0.24
SMAD4-205ENST00000588745 TTLL6Q8N841 843 aa13.57□□□□□ -0.24
SMAD4-205ENST00000588745 TBC1D22AQ8WUA7 517 aa13.57□□□□□ -0.24
SMAD4-205ENST00000588745 ZNF219Q9P2Y4 722 aaPredicted RBP13.57□□□□□ -0.24
SMAD4-205ENST00000588745 ATF5Q9Y2D1 282 aaPredicted RBP13.57□□□□□ -0.24
SMAD4-205ENST00000588745 SLC4A4Q9Y6R1 1079 aa13.57□□□□□ -0.24
SMAD4-205ENST00000588745 GSG1L2A8MUP6 293 aa13.56□□□□□ -0.24
SMAD4-205ENST00000588745 ZNF213O14771 459 aa13.56□□□□□ -0.24
SMAD4-205ENST00000588745 PRKAB2O43741 272 aa13.56□□□□□ -0.24
SMAD4-205ENST00000588745 HMGB1P09429 215 aaKnown RBP13.56□□□□□ -0.24
SMAD4-205ENST00000588745 DDIT3P35638 169 aa13.56□□□□□ -0.24
SMAD4-205ENST00000588745 BRCA1P38398 1863 aaKnown RBP13.56□□□□□ -0.24
SMAD4-205ENST00000588745 HAND2P61296 217 aa13.56□□□□□ -0.24
SMAD4-205ENST00000588745 GSTO1P78417 241 aa13.56□□□□□ -0.24
SMAD4-205ENST00000588745 COL9A3Q14050 684 aaPredicted RBP13.56□□□□□ -0.24
SMAD4-205ENST00000588745 NACAP1Q9BZK3 213 aa13.56□□□□□ -0.24
SMAD4-205ENST00000588745 NAPBQ9H115 298 aa13.56□□□□□ -0.24
SMAD4-205ENST00000588745 ALDH8A1Q9H2A2 487 aaPredicted RBP13.56□□□□□ -0.24
SMAD4-205ENST00000588745 ZNF646O15015 1829 aaPredicted RBP13.55□□□□□ -0.24
SMAD4-205ENST00000588745 LAMB1P07942 1786 aa13.55□□□□□ -0.24
SMAD4-205ENST00000588745 KCNA3P22001 575 aa13.55□□□□□ -0.24
SMAD4-205ENST00000588745 TDO2P48775 406 aa13.55□□□□□ -0.24
SMAD4-205ENST00000588745 TGFB2P61812 414 aa13.55□□□□□ -0.24
SMAD4-205ENST00000588745 DYNLL1P63167 89 aaKnown RBP13.55□□□□□ -0.24
SMAD4-205ENST00000588745 CUL4AQ13619 759 aa13.55□□□□□ -0.24
SMAD4-205ENST00000588745 ANKRD1Q15327 319 aa13.55□□□□□ -0.24
SMAD4-205ENST00000588745 GRIK5Q16478 980 aa13.55□□□□□ -0.24
SMAD4-205ENST00000588745 GRIPAP1Q4V328 841 aa13.55□□□□□ -0.24
SMAD4-205ENST00000588745 CCDC93Q567U6 631 aa13.55□□□□□ -0.24
SMAD4-205ENST00000588745 MFSD14BQ5SR56 506 aa13.55□□□□□ -0.24
SMAD4-205ENST00000588745 SUPT20HQ8NEM7 779 aa13.55□□□□□ -0.24
SMAD4-205ENST00000588745 LIMCH1Q9UPQ0 1083 aa13.55□□□□□ -0.24
SMAD4-205ENST00000588745 MYH2Q9UKX2 1941 aa13.54□□□□□ -0.24
SMAD4-205ENST00000588745 C21orf2O43822 256 aa13.54□□□□□ -0.24
SMAD4-205ENST00000588745 GTF2IP78347 998 aa13.54□□□□□ -0.24
SMAD4-205ENST00000588745 DOK7Q18PE1 504 aa13.54□□□□□ -0.24
SMAD4-205ENST00000588745 TBC1D10CQ8IV04 446 aa13.54□□□□□ -0.24
SMAD4-205ENST00000588745 ZSCAN31Q96LW9 406 aaPredicted RBP13.54□□□□□ -0.24
SMAD4-205ENST00000588745 SGIP1Q9BQI5 828 aa13.54□□□□□ -0.24
SMAD4-205ENST00000588745 NBPF3Q9H094 633 aa13.54□□□□□ -0.24
SMAD4-205ENST00000588745 FOXD4L1Q9NU39 408 aa13.54□□□□□ -0.24
SMAD4-205ENST00000588745 AATFQ9NY61 560 aaKnown RBP eCLIP13.54□□□□□ -0.24
SMAD4-205ENST00000588745 MROH7-TTC4A0A0A0MT08 1334 aa13.54□□□□□ -0.24
SMAD4-205ENST00000588745 PSDA5PKW4 1024 aaPredicted RBP13.53□□□□□ -0.24
SMAD4-205ENST00000588745 G3V3G9 751 aa13.53□□□□□ -0.24
SMAD4-205ENST00000588745 LDHCP07864 332 aa13.53□□□□□ -0.24
SMAD4-205ENST00000588745 KIAA2012Q0VF49 1180 aa13.53□□□□□ -0.24
SMAD4-205ENST00000588745 DIXDC1Q155Q3 683 aa13.53□□□□□ -0.24
SMAD4-205ENST00000588745 DCAF8Q5TAQ9 597 aa13.53□□□□□ -0.24
SMAD4-205ENST00000588745 DHX32Q7L7V1 743 aaKnown RBP13.53□□□□□ -0.24
SMAD4-205ENST00000588745 PODNQ7Z5L7 613 aa13.53□□□□□ -0.24
SMAD4-205ENST00000588745 SDR42E1Q8WUS8 393 aa13.53□□□□□ -0.24
SMAD4-205ENST00000588745 TCEANC2Q96MN5 208 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms