RNA–Protein interactions for RNA: ENST00000586921.1

SMARCA4-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 569 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-211ENST00000586921 PRMT6Q96LA8 375 aaPredicted RBP16.56■□□□□ 0.24
SMARCA4-211ENST00000586921 CDC5LQ99459 802 aaKnown RBP16.56■□□□□ 0.24
SMARCA4-211ENST00000586921 CRISPLD2Q9H0B8 497 aa16.56■□□□□ 0.24
SMARCA4-211ENST00000586921 MINPP1Q9UNW1 487 aa16.56■□□□□ 0.24
SMARCA4-211ENST00000586921 AOX1Q06278 1338 aa16.55■□□□□ 0.24
SMARCA4-211ENST00000586921 F8W031 263 aaPredicted RBP16.55■□□□□ 0.24
SMARCA4-211ENST00000586921 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.55■□□□□ 0.242e-6■■□□□ 12.8
SMARCA4-211ENST00000586921 PAK6Q9NQU5 681 aaPredicted RBP16.55■□□□□ 0.24
SMARCA4-211ENST00000586921 CHPF2Q9P2E5 772 aa16.55■□□□□ 0.24
SMARCA4-211ENST00000586921 TIMELESSQ9UNS1 1208 aa16.55■□□□□ 0.24
SMARCA4-211ENST00000586921 PDE8AO60658 829 aa16.54■□□□□ 0.24
SMARCA4-211ENST00000586921 ELNP15502 786 aa16.54■□□□□ 0.24
SMARCA4-211ENST00000586921 ERO1BQ86YB8 467 aa16.54■□□□□ 0.24
SMARCA4-211ENST00000586921 CERS5Q8N5B7 392 aa16.54■□□□□ 0.24
SMARCA4-211ENST00000586921 CDX2Q99626 313 aaPredicted RBP16.54■□□□□ 0.24
SMARCA4-211ENST00000586921 GABRQQ9UN88 632 aa16.54■□□□□ 0.24
SMARCA4-211ENST00000586921 IRF6O14896 467 aa16.53■□□□□ 0.24
SMARCA4-211ENST00000586921 RBM5P52756 815 aaKnown RBP eCLIP16.53■□□□□ 0.24
SMARCA4-211ENST00000586921 BSDC1Q9NW68 430 aaPredicted RBP16.53■□□□□ 0.24
SMARCA4-211ENST00000586921 SPEF2Q9C093 1822 aa16.53■□□□□ 0.24
SMARCA4-211ENST00000586921 COL2A1P02458 1487 aaPredicted RBP16.53■□□□□ 0.24
SMARCA4-211ENST00000586921 KLRK1P26718 216 aa16.52■□□□□ 0.24
SMARCA4-211ENST00000586921 NFE2L2Q16236 605 aa16.52■□□□□ 0.24
SMARCA4-211ENST00000586921 CDAN1Q8IWY9 1227 aa16.52■□□□□ 0.24
SMARCA4-211ENST00000586921 ANKLE1Q8NAG6 615 aa16.52■□□□□ 0.24
SMARCA4-211ENST00000586921 LEMD3Q9Y2U8 911 aa16.52■□□□□ 0.24
SMARCA4-211ENST00000586921 SNCAIPQ9Y6H5 919 aa16.52■□□□□ 0.24
SMARCA4-211ENST00000586921 MGAMO43451 1857 aa16.51■□□□□ 0.23
SMARCA4-211ENST00000586921 PDHXO00330 501 aa16.51■□□□□ 0.23
SMARCA4-211ENST00000586921 PPIL2Q13356 520 aa16.51■□□□□ 0.23
SMARCA4-211ENST00000586921 TJAP1Q5JTD0 557 aa16.51■□□□□ 0.23
SMARCA4-211ENST00000586921 PXYLP1Q8TE99 480 aa16.51■□□□□ 0.23
SMARCA4-211ENST00000586921 TEPSINQ96N21 525 aa16.51■□□□□ 0.23
SMARCA4-211ENST00000586921 NBPF3Q9H094 633 aa16.51■□□□□ 0.23
SMARCA4-211ENST00000586921 CDH23Q9H251 3354 aa16.51■□□□□ 0.23
SMARCA4-211ENST00000586921 FLT3LGP49771 235 aa16.5■□□□□ 0.23
SMARCA4-211ENST00000586921 MAP3K12Q12852 859 aa16.5■□□□□ 0.23
SMARCA4-211ENST00000586921 SPDYE2Q495Y8 402 aa16.5■□□□□ 0.23
SMARCA4-211ENST00000586921 ANKRD23Q86SG2 305 aa16.5■□□□□ 0.23
SMARCA4-211ENST00000586921 PCCAP05165 728 aaPredicted RBP16.49■□□□□ 0.23
SMARCA4-211ENST00000586921 MDM2Q00987 491 aaPredicted RBP16.49■□□□□ 0.23
SMARCA4-211ENST00000586921 ARAP2Q8WZ64 1704 aa16.49■□□□□ 0.23
SMARCA4-211ENST00000586921 JARID2Q92833 1246 aaPredicted RBP16.49■□□□□ 0.23
SMARCA4-211ENST00000586921 TMEM39BQ9GZU3 492 aa16.49■□□□□ 0.23
SMARCA4-211ENST00000586921 C11orf49Q9H6J7 331 aa16.49■□□□□ 0.23
SMARCA4-211ENST00000586921 CD209Q9NNX6 404 aa16.49■□□□□ 0.23
SMARCA4-211ENST00000586921 ZNF70Q9UC06 446 aaPredicted RBP16.49■□□□□ 0.23
SMARCA4-211ENST00000586921 CTSWP56202 376 aa16.48■□□□□ 0.23
SMARCA4-211ENST00000586921 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.48■□□□□ 0.23
SMARCA4-211ENST00000586921 WRNIP1Q96S55 665 aa16.48■□□□□ 0.23
SMARCA4-211ENST00000586921 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.48■□□□□ 0.23
SMARCA4-211ENST00000586921 BABAM1Q9NWV8 329 aa16.48■□□□□ 0.23
SMARCA4-211ENST00000586921 DDX60LQ5H9U9 1706 aaKnown RBP16.48■□□□□ 0.23
SMARCA4-211ENST00000586921 NCOR1O75376 2440 aa16.47■□□□□ 0.23
SMARCA4-211ENST00000586921 TCP10L2B9ZVM9 353 aa16.47■□□□□ 0.23
SMARCA4-211ENST00000586921 KCNJ4P48050 445 aa16.47■□□□□ 0.23
SMARCA4-211ENST00000586921 IRF5Q13568 498 aa16.47■□□□□ 0.23
SMARCA4-211ENST00000586921 HDGFL1Q5TGJ6 251 aa16.47■□□□□ 0.23
SMARCA4-211ENST00000586921 MYLIPQ8WY64 445 aa16.47■□□□□ 0.23
SMARCA4-211ENST00000586921 ZKSCAN4Q969J2 545 aaPredicted RBP16.47■□□□□ 0.23
SMARCA4-211ENST00000586921 PARK7Q99497 189 aaKnown RBP16.47■□□□□ 0.23
SMARCA4-211ENST00000586921 TAOK2Q9UL54 1235 aa16.47■□□□□ 0.23
SMARCA4-211ENST00000586921 PIEZO1Q92508 2521 aa16.47■□□□□ 0.23
SMARCA4-211ENST00000586921 BCRP11274 1271 aa16.46■□□□□ 0.23
SMARCA4-211ENST00000586921 FOSL2P15408 326 aa16.46■□□□□ 0.23
SMARCA4-211ENST00000586921 TNNI2P48788 182 aa16.46■□□□□ 0.23
SMARCA4-211ENST00000586921 RIC3Q7Z5B4 369 aa16.46■□□□□ 0.23
SMARCA4-211ENST00000586921 TDRD3Q9H7E2 651 aaKnown RBP16.46■□□□□ 0.23
SMARCA4-211ENST00000586921 DBF4Q9UBU7 674 aaPredicted RBP16.46■□□□□ 0.23
SMARCA4-211ENST00000586921 KRT24Q2M2I5 525 aa16.45■□□□□ 0.22
SMARCA4-211ENST00000586921 CCDC191Q8NCU4 936 aa16.45■□□□□ 0.22
SMARCA4-211ENST00000586921 PLEKHF1Q96S99 279 aa16.45■□□□□ 0.22
SMARCA4-211ENST00000586921 ANKRD2Q9GZV1 360 aa16.45■□□□□ 0.22
SMARCA4-211ENST00000586921 SEMA6BQ9H3T3 888 aa16.45■□□□□ 0.22
SMARCA4-211ENST00000586921 GREM2Q9H772 168 aa16.45■□□□□ 0.22
SMARCA4-211ENST00000586921 HYPKQ9NX55 129 aa16.45■□□□□ 0.22
SMARCA4-211ENST00000586921 TNPO2O14787 897 aaKnown RBP16.44■□□□□ 0.22
SMARCA4-211ENST00000586921 FKBP1AP62942 108 aaKnown RBP16.44■□□□□ 0.22
SMARCA4-211ENST00000586921 PPATQ06203 517 aa16.44■□□□□ 0.22
SMARCA4-211ENST00000586921 GOLGA2Q08379 1002 aa16.44■□□□□ 0.22
SMARCA4-211ENST00000586921 MYD88Q99836 296 aa16.44■□□□□ 0.22
SMARCA4-211ENST00000586921 CWC25Q9NXE8 425 aaPredicted RBP16.44■□□□□ 0.22
SMARCA4-211ENST00000586921 MAPK8IP3Q9UPT6 1336 aa16.44■□□□□ 0.22
SMARCA4-211ENST00000586921 CYP2C8P10632 490 aa16.43■□□□□ 0.22
SMARCA4-211ENST00000586921 IGHMBP2P38935 993 aaKnown RBP16.43■□□□□ 0.22
SMARCA4-211ENST00000586921 JAG2Q9Y219 1238 aa16.43■□□□□ 0.22
SMARCA4-211ENST00000586921 BDP1A6H8Y1 2624 aa16.43■□□□□ 0.22
SMARCA4-211ENST00000586921 SYNGAP1Q96PV0 1343 aa16.43■□□□□ 0.22
SMARCA4-211ENST00000586921 PPP2R1AP30153 589 aa16.42■□□□□ 0.22
SMARCA4-211ENST00000586921 TTLL11Q8NHH1 800 aa16.42■□□□□ 0.22
SMARCA4-211ENST00000586921 LBHD1Q9BQE6 289 aaPredicted RBP16.42■□□□□ 0.22
SMARCA4-211ENST00000586921 PFASO15067 1338 aa16.42■□□□□ 0.22
SMARCA4-211ENST00000586921 MYH3P11055 1940 aa16.41■□□□□ 0.22
SMARCA4-211ENST00000586921 DZIP1LQ8IYY4 767 aaKnown RBP16.41■□□□□ 0.22
SMARCA4-211ENST00000586921 SERPINA10Q9UK55 444 aa16.41■□□□□ 0.22
SMARCA4-211ENST00000586921 IL1R1P14778 569 aa16.4■□□□□ 0.22
SMARCA4-211ENST00000586921 ZNF804AQ7Z570 1209 aa16.4■□□□□ 0.22
SMARCA4-211ENST00000586921 HOOK2Q96ED9 719 aa16.4■□□□□ 0.22
SMARCA4-211ENST00000586921 KCNH4Q9UQ05 1017 aa16.4■□□□□ 0.22
SMARCA4-211ENST00000586921 HMGCRP04035 888 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 123.1 ms