RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 IL15P40933 162 aaPredicted RBP27.85■■■□□ 2.05
CASC3-207ENST00000581849 CHAF1AQ13111 956 aaPredicted RBP27.85■■■□□ 2.05
CASC3-207ENST00000581849 CEP126Q9P2H0 1117 aa27.85■■■□□ 2.05
CASC3-207ENST00000581849 ZNF70Q9UC06 446 aaPredicted RBP27.85■■■□□ 2.05
CASC3-207ENST00000581849 AOX1Q06278 1338 aa27.85■■■□□ 2.05
CASC3-207ENST00000581849 MYH13Q9UKX3 1938 aa27.84■■■□□ 2.05
CASC3-207ENST00000581849 ZBTB22O15209 634 aa27.84■■■□□ 2.05
CASC3-207ENST00000581849 RASA3Q14644 834 aa27.84■■■□□ 2.05
CASC3-207ENST00000581849 MIER1Q8N108 512 aa27.84■■■□□ 2.05
CASC3-207ENST00000581849 TM4SF4P48230 202 aa27.83■■■□□ 2.05
CASC3-207ENST00000581849 MTX1Q13505 466 aa27.83■■■□□ 2.05
CASC3-207ENST00000581849 ATF7IPQ6VMQ6 1270 aa27.83■■■□□ 2.05
CASC3-207ENST00000581849 TRIM27P14373 513 aa27.82■■■□□ 2.04
CASC3-207ENST00000581849 SREBF2Q12772 1141 aa27.82■■■□□ 2.04
CASC3-207ENST00000581849 PRKG1Q13976 671 aa27.82■■■□□ 2.04
CASC3-207ENST00000581849 WDR66Q8TBY9 1149 aa27.82■■■□□ 2.04
CASC3-207ENST00000581849 TEKT1Q969V4 418 aa27.82■■■□□ 2.04
CASC3-207ENST00000581849 SIL1Q9H173 461 aa27.82■■■□□ 2.04
CASC3-207ENST00000581849 TDRD3Q9H7E2 651 aaKnown RBP27.82■■■□□ 2.04
CASC3-207ENST00000581849 TNNI2P48788 182 aa27.81■■■□□ 2.04
CASC3-207ENST00000581849 GRIK5Q16478 980 aa27.81■■■□□ 2.04
CASC3-207ENST00000581849 ATP2B3Q16720 1220 aa27.81■■■□□ 2.04
CASC3-207ENST00000581849 NBPF12Q5TAG4 269 aaPredicted RBP27.81■■■□□ 2.04
CASC3-207ENST00000581849 LAMB1P07942 1786 aa27.81■■■□□ 2.04
CASC3-207ENST00000581849 IREB2P48200 963 aaKnown RBP27.8■■■□□ 2.04
CASC3-207ENST00000581849 SPRYD7Q5W111 196 aa27.8■■■□□ 2.04
CASC3-207ENST00000581849 ZDHHC15Q96MV8 337 aa27.8■■■□□ 2.04
CASC3-207ENST00000581849 GNL3LQ9NVN8 582 aaKnown RBP27.8■■■□□ 2.04
CASC3-207ENST00000581849 ZBTB48P10074 688 aaPredicted RBP27.79■■■□□ 2.04
CASC3-207ENST00000581849 HNRNPUQ00839 825 aaKnown RBP eCLIP27.79■■■□□ 2.04
CASC3-207ENST00000581849 HHIPL2Q6UWX4 724 aa27.79■■■□□ 2.04
CASC3-207ENST00000581849 SEMA3EO15041 775 aa27.78■■■□□ 2.04
CASC3-207ENST00000581849 BCAR3O75815 825 aa27.78■■■□□ 2.04
CASC3-207ENST00000581849 NOM1Q5C9Z4 860 aaKnown RBP27.78■■■□□ 2.04
CASC3-207ENST00000581849 SLC10A4Q96EP9 437 aa27.78■■■□□ 2.04
CASC3-207ENST00000581849 MCOLN1Q9GZU1 580 aa27.78■■■□□ 2.04
CASC3-207ENST00000581849 INHBEP58166 350 aa27.77■■■□□ 2.04
CASC3-207ENST00000581849 FKBP1CQ5VVH2 108 aa27.77■■■□□ 2.04
CASC3-207ENST00000581849 TEPSINQ96N21 525 aa27.77■■■□□ 2.04
CASC3-207ENST00000581849 CFHR5Q9BXR6 569 aa27.77■■■□□ 2.04
CASC3-207ENST00000581849 PA2G4Q9UQ80 394 aaKnown RBP27.77■■■□□ 2.04
CASC3-207ENST00000581849 MANSC4A6NHS7 340 aaPredicted RBP27.76■■■□□ 2.03
CASC3-207ENST00000581849 SRGAP3O43295 1099 aa27.76■■■□□ 2.03
CASC3-207ENST00000581849 USP2O75604 605 aaPredicted RBP27.76■■■□□ 2.03
CASC3-207ENST00000581849 DGKZQ13574 1117 aa27.76■■■□□ 2.03
CASC3-207ENST00000581849 ANKRD13AQ8IZ07 590 aa27.76■■■□□ 2.03
CASC3-207ENST00000581849 FRAT1Q92837 279 aaPredicted RBP27.76■■■□□ 2.03
CASC3-207ENST00000581849 TMOD2Q9NZR1 351 aa27.76■■■□□ 2.03
CASC3-207ENST00000581849 FZD1Q9UP38 647 aa27.76■■■□□ 2.03
CASC3-207ENST00000581849 SALL1Q9NSC2 1324 aa27.75■■■□□ 2.03
CASC3-207ENST00000581849 ZKSCAN2Q63HK3 967 aa27.75■■■□□ 2.03
CASC3-207ENST00000581849 WNK4Q96J92 1243 aa27.75■■■□□ 2.03
CASC3-207ENST00000581849 TCP10L2B9ZVM9 353 aa27.74■■■□□ 2.03
CASC3-207ENST00000581849 ALDH1A1P00352 501 aa27.74■■■□□ 2.03
CASC3-207ENST00000581849 GNAI2P04899 355 aa27.74■■■□□ 2.03
CASC3-207ENST00000581849 APOBEC3HQ6NTF7 200 aaKnown RBP27.74■■■□□ 2.03
CASC3-207ENST00000581849 FAM83AQ86UY5 434 aa27.74■■■□□ 2.03
CASC3-207ENST00000581849 DENND2AQ9ULE3 1009 aa27.74■■■□□ 2.03
CASC3-207ENST00000581849 MKRN3Q13064 507 aaKnown RBP27.73■■■□□ 2.03
CASC3-207ENST00000581849 CLMNQ96JQ2 1002 aa27.73■■■□□ 2.03
CASC3-207ENST00000581849 AKAP2Q9Y2D5 859 aa27.73■■■□□ 2.03
CASC3-207ENST00000581849 PDS5AQ29RF7 1337 aaKnown RBP27.72■■■□□ 2.03
CASC3-207ENST00000581849 OTOFQ9HC10 1997 aa27.72■■■□□ 2.03
CASC3-207ENST00000581849 RPAP1Q9BWH6 1393 aaPredicted RBP27.72■■■□□ 2.03
CASC3-207ENST00000581849 HOOK2Q96ED9 719 aa27.71■■■□□ 2.03
CASC3-207ENST00000581849 TMEM39BQ9GZU3 492 aa27.71■■■□□ 2.03
CASC3-207ENST00000581849 ZBED9Q6R2W3 1325 aa27.7■■■□□ 2.03
CASC3-207ENST00000581849 PHKA1P46020 1223 aa27.7■■■□□ 2.02
CASC3-207ENST00000581849 CTU1Q7Z7A3 348 aaKnown RBP27.7■■■□□ 2.02
CASC3-207ENST00000581849 ZGPATQ8N5A5 531 aaKnown RBP27.7■■■□□ 2.02
CASC3-207ENST00000581849 CLUAP1Q96AJ1 413 aa27.7■■■□□ 2.02
CASC3-207ENST00000581849 TNNQ9UQP3 1299 aa27.7■■■□□ 2.02
CASC3-207ENST00000581849 CCDC102BQ68D86 513 aa27.69■■■□□ 2.02
CASC3-207ENST00000581849 TBC1D8O95759 1140 aa27.68■■■□□ 2.02
CASC3-207ENST00000581849 LDHBP07195 334 aaKnown RBP27.68■■■□□ 2.02
CASC3-207ENST00000581849 CDAN1Q8IWY9 1227 aa27.68■■■□□ 2.02
CASC3-207ENST00000581849 TMEM57Q8N5G2 664 aa27.68■■■□□ 2.02
CASC3-207ENST00000581849 A0A1B0GUL7 405 aa27.67■■■□□ 2.02
CASC3-207ENST00000581849 CCDC85CA6NKD9 419 aa27.67■■■□□ 2.02
CASC3-207ENST00000581849 GPR25O00155 361 aa27.67■■■□□ 2.02
CASC3-207ENST00000581849 PRDX5P30044 214 aa27.67■■■□□ 2.02
CASC3-207ENST00000581849 ADORA1P30542 326 aa27.67■■■□□ 2.02
CASC3-207ENST00000581849 MVPQ14764 893 aaKnown RBP27.67■■■□□ 2.02
CASC3-207ENST00000581849 IFNL1Q8IU54 200 aa27.67■■■□□ 2.02
CASC3-207ENST00000581849 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.67■■■□□ 2.02
CASC3-207ENST00000581849 DAGLAQ9Y4D2 1042 aa27.67■■■□□ 2.02
CASC3-207ENST00000581849 CACNB3P54284 484 aa27.66■■■□□ 2.02
CASC3-207ENST00000581849 MAP3K9P80192 1104 aa27.66■■■□□ 2.02
CASC3-207ENST00000581849 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.66■■■□□ 2.02
CASC3-207ENST00000581849 ZNF296Q8WUU4 475 aaPredicted RBP27.66■■■□□ 2.02
CASC3-207ENST00000581849 TESPA1A2RU30 521 aaPredicted RBP27.65■■■□□ 2.02
CASC3-207ENST00000581849 TIMM10P62072 90 aa27.65■■■□□ 2.02
CASC3-207ENST00000581849 TFCP2Q12800 502 aa27.65■■■□□ 2.02
CASC3-207ENST00000581849 PKN2Q16513 984 aaKnown RBP27.65■■■□□ 2.02
CASC3-207ENST00000581849 GJA5P36382 358 aa27.64■■■□□ 2.02
CASC3-207ENST00000581849 RASGRF1Q13972 1273 aa27.64■■■□□ 2.02
CASC3-207ENST00000581849 OTUD7BQ6GQQ9 843 aa27.64■■■□□ 2.02
CASC3-207ENST00000581849 XAGE2Q96GT9 111 aa27.64■■■□□ 2.02
CASC3-207ENST00000581849 CSADQ9Y600 493 aa27.64■■■□□ 2.02
CASC3-207ENST00000581849 PNMA6EA0A0J9YXQ4 647 aa27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms