RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 PTCH2Q9Y6C5 1203 aa15.54■□□□□ 0.08
CDK5RAP3-216ENST00000579853 SNAP23O00161 211 aa15.53■□□□□ 0.08
CDK5RAP3-216ENST00000579853 FKBP5Q13451 457 aaPredicted RBP15.53■□□□□ 0.08
CDK5RAP3-216ENST00000579853 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.53■□□□□ 0.08
CDK5RAP3-216ENST00000579853 G2E3Q7L622 706 aa15.53■□□□□ 0.08
CDK5RAP3-216ENST00000579853 BRI3BPQ8WY22 251 aa15.53■□□□□ 0.08
CDK5RAP3-216ENST00000579853 OTOFQ9HC10 1997 aa15.53■□□□□ 0.08
CDK5RAP3-216ENST00000579853 LAMA3Q16787 3333 aa15.52■□□□□ 0.08
CDK5RAP3-216ENST00000579853 MFSD14BQ5SR56 506 aa15.52■□□□□ 0.08
CDK5RAP3-216ENST00000579853 TSR2Q969E8 191 aaKnown RBP15.52■□□□□ 0.08
CDK5RAP3-216ENST00000579853 TTF2Q9UNY4 1162 aaKnown RBP15.52■□□□□ 0.08
CDK5RAP3-216ENST00000579853 CHMP3Q9Y3E7 222 aa15.52■□□□□ 0.08
CDK5RAP3-216ENST00000579853 COL6A3P12111 3177 aa15.51■□□□□ 0.07
CDK5RAP3-216ENST00000579853 TLR2O60603 784 aa15.51■□□□□ 0.07
CDK5RAP3-216ENST00000579853 CETPP11597 493 aa15.51■□□□□ 0.07
CDK5RAP3-216ENST00000579853 VGLL4Q14135 290 aa15.51■□□□□ 0.07
CDK5RAP3-216ENST00000579853 CCDC57Q2TAC2 916 aa15.51■□□□□ 0.07
CDK5RAP3-216ENST00000579853 TAF7LQ5H9L4 462 aa15.51■□□□□ 0.07
CDK5RAP3-216ENST00000579853 LDHAL6AQ6ZMR3 332 aa15.51■□□□□ 0.07
CDK5RAP3-216ENST00000579853 DZIP1LQ8IYY4 767 aaKnown RBP15.51■□□□□ 0.07
CDK5RAP3-216ENST00000579853 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.51■□□□□ 0.07
CDK5RAP3-216ENST00000579853 HOOK2Q96ED9 719 aa15.51■□□□□ 0.07
CDK5RAP3-216ENST00000579853 TEPSINQ96N21 525 aa15.51■□□□□ 0.07
CDK5RAP3-216ENST00000579853 TDRD3Q9H7E2 651 aaKnown RBP15.51■□□□□ 0.07
CDK5RAP3-216ENST00000579853 PRKRIP1Q9H875 184 aaPredicted RBP15.51■□□□□ 0.07
CDK5RAP3-216ENST00000579853 FOXO4P98177 505 aa15.5■□□□□ 0.07
CDK5RAP3-216ENST00000579853 CAP1Q01518 475 aa15.5■□□□□ 0.07
CDK5RAP3-216ENST00000579853 UBE4AQ14139 1066 aa15.5■□□□□ 0.07
CDK5RAP3-216ENST00000579853 CCDC27Q2M243 656 aa15.5■□□□□ 0.07
CDK5RAP3-216ENST00000579853 FAM43AQ8N2R8 423 aa15.5■□□□□ 0.07
CDK5RAP3-216ENST00000579853 TDRD7Q8NHU6 1098 aaKnown RBP15.5■□□□□ 0.07
CDK5RAP3-216ENST00000579853 OTUD5Q96G74 571 aa15.5■□□□□ 0.07
CDK5RAP3-216ENST00000579853 CNNM1Q9NRU3 951 aa15.5■□□□□ 0.07
CDK5RAP3-216ENST00000579853 JAG2Q9Y219 1238 aa15.5■□□□□ 0.07
CDK5RAP3-216ENST00000579853 A0A1B0GUL6 1792 aa15.49■□□□□ 0.07
CDK5RAP3-216ENST00000579853 AOX1Q06278 1338 aa15.49■□□□□ 0.07
CDK5RAP3-216ENST00000579853 SPDYE5A6NIY4 337 aa15.49■□□□□ 0.07
CDK5RAP3-216ENST00000579853 H0YGN5 161 aa15.49■□□□□ 0.07
CDK5RAP3-216ENST00000579853 HIBADHP31937 336 aaKnown RBP15.49■□□□□ 0.07
CDK5RAP3-216ENST00000579853 LACTBP83111 547 aaPredicted RBP15.49■□□□□ 0.07
CDK5RAP3-216ENST00000579853 ERO1BQ86YB8 467 aa15.49■□□□□ 0.07
CDK5RAP3-216ENST00000579853 NKX2-3Q8TAU0 364 aa15.49■□□□□ 0.07
CDK5RAP3-216ENST00000579853 IL16Q14005 1332 aa15.48■□□□□ 0.07
CDK5RAP3-216ENST00000579853 TCP10L2B9ZVM9 353 aa15.48■□□□□ 0.07
CDK5RAP3-216ENST00000579853 PLIN1O60240 522 aa15.48■□□□□ 0.07
CDK5RAP3-216ENST00000579853 HDLBPQ00341 1268 aaKnown RBP15.48■□□□□ 0.07
CDK5RAP3-216ENST00000579853 SNAPC2Q13487 334 aa15.48■□□□□ 0.07
CDK5RAP3-216ENST00000579853 LMBR1LQ6UX01 489 aa15.48■□□□□ 0.07
CDK5RAP3-216ENST00000579853 TMEM39BQ9GZU3 492 aa15.48■□□□□ 0.07
CDK5RAP3-216ENST00000579853 HOXD10P28358 340 aa15.47■□□□□ 0.07
CDK5RAP3-216ENST00000579853 CRKP46108 304 aa15.47■□□□□ 0.07
CDK5RAP3-216ENST00000579853 SH3TC2Q8TF17 1288 aa15.47■□□□□ 0.07
CDK5RAP3-216ENST00000579853 TBC1D22AQ8WUA7 517 aa15.47■□□□□ 0.07
CDK5RAP3-216ENST00000579853 ARAP2Q8WZ64 1704 aa15.47■□□□□ 0.07
CDK5RAP3-216ENST00000579853 FKBP1CQ5VVH2 108 aa15.46■□□□□ 0.07
CDK5RAP3-216ENST00000579853 WWC1Q8IX03 1113 aa15.46■□□□□ 0.07
CDK5RAP3-216ENST00000579853 HTATIP2Q9BUP3 242 aa15.46■□□□□ 0.07
CDK5RAP3-216ENST00000579853 TMOD2Q9NZR1 351 aa15.46■□□□□ 0.07
CDK5RAP3-216ENST00000579853 BTBD19C9JJ37 291 aa15.45■□□□□ 0.06
CDK5RAP3-216ENST00000579853 MYCP01106 439 aaPredicted RBP15.45■□□□□ 0.06
CDK5RAP3-216ENST00000579853 PPIL2Q13356 520 aa15.45■□□□□ 0.06
CDK5RAP3-216ENST00000579853 BEND3Q5T5X7 828 aa15.45■□□□□ 0.06
CDK5RAP3-216ENST00000579853 DCAF15Q66K64 600 aa15.45■□□□□ 0.06
CDK5RAP3-216ENST00000579853 CHRDL2Q6WN34 429 aa15.45■□□□□ 0.06
CDK5RAP3-216ENST00000579853 FAM83AQ86UY5 434 aa15.45■□□□□ 0.06
CDK5RAP3-216ENST00000579853 VPS37DQ86XT2 251 aa15.45■□□□□ 0.06
CDK5RAP3-216ENST00000579853 DPF3Q92784 378 aa15.45■□□□□ 0.06
CDK5RAP3-216ENST00000579853 ZNF594Q96JF6 807 aaPredicted RBP15.45■□□□□ 0.06
CDK5RAP3-216ENST00000579853 FAM84BQ96KN1 310 aaPredicted RBP15.45■□□□□ 0.06
CDK5RAP3-216ENST00000579853 WRNIP1Q96S55 665 aa15.45■□□□□ 0.06
CDK5RAP3-216ENST00000579853 MRIQ9BWK5 157 aa15.45■□□□□ 0.06
CDK5RAP3-216ENST00000579853 SNCAIPQ9Y6H5 919 aa15.45■□□□□ 0.06
CDK5RAP3-216ENST00000579853 GRM8O00222 908 aa15.44■□□□□ 0.06
CDK5RAP3-216ENST00000579853 IRF6O14896 467 aa15.44■□□□□ 0.06
CDK5RAP3-216ENST00000579853 GYG1P46976 350 aa15.44■□□□□ 0.06
CDK5RAP3-216ENST00000579853 PPATQ06203 517 aa15.44■□□□□ 0.06
CDK5RAP3-216ENST00000579853 CDAN1Q8IWY9 1227 aa15.44■□□□□ 0.06
CDK5RAP3-216ENST00000579853 TEKT1Q969V4 418 aa15.44■□□□□ 0.06
CDK5RAP3-216ENST00000579853 ARHGAP39Q9C0H5 1083 aa15.44■□□□□ 0.06
CDK5RAP3-216ENST00000579853 C9orf78Q9NZ63 289 aaPredicted RBP15.44■□□□□ 0.06
CDK5RAP3-216ENST00000579853 SRRDQ9UH36 339 aa15.44■□□□□ 0.06
CDK5RAP3-216ENST00000579853 NR2E3Q9Y5X4 410 aa15.44■□□□□ 0.06
CDK5RAP3-216ENST00000579853 MROH5Q6ZUA9 1318 aa15.43■□□□□ 0.06
CDK5RAP3-216ENST00000579853 FRAT2O75474 233 aaPredicted RBP15.43■□□□□ 0.06
CDK5RAP3-216ENST00000579853 CAPN2P17655 700 aa15.43■□□□□ 0.06
CDK5RAP3-216ENST00000579853 CAVIN4Q5BKX8 364 aa15.43■□□□□ 0.06
CDK5RAP3-216ENST00000579853 C17orf99Q6UX52 265 aa15.43■□□□□ 0.06
CDK5RAP3-216ENST00000579853 RAET1EQ8TD07 263 aa15.43■□□□□ 0.06
CDK5RAP3-216ENST00000579853 SUGT1Q9Y2Z0 365 aa15.43■□□□□ 0.06
CDK5RAP3-216ENST00000579853 MAST3O60307 1309 aa15.43■□□□□ 0.06
CDK5RAP3-216ENST00000579853 RPAP1Q9BWH6 1393 aaPredicted RBP15.42■□□□□ 0.06
CDK5RAP3-216ENST00000579853 GJB1P08034 283 aa15.42■□□□□ 0.06
CDK5RAP3-216ENST00000579853 GRK4P32298 578 aa15.42■□□□□ 0.06
CDK5RAP3-216ENST00000579853 PSMC4P43686 418 aa15.42■□□□□ 0.06
CDK5RAP3-216ENST00000579853 EPHA10Q5JZY3 1008 aa15.42■□□□□ 0.06
CDK5RAP3-216ENST00000579853 FBXO33Q7Z6M2 555 aa15.42■□□□□ 0.06
CDK5RAP3-216ENST00000579853 ANKRD23Q86SG2 305 aa15.42■□□□□ 0.06
CDK5RAP3-216ENST00000579853 ZKSCAN4Q969J2 545 aaPredicted RBP15.42■□□□□ 0.06
CDK5RAP3-216ENST00000579853 TRIM47Q96LD4 638 aa15.42■□□□□ 0.06
CDK5RAP3-216ENST00000579853 ZDHHC15Q96MV8 337 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms