RNA–Protein interactions for RNA: ENST00000578875.5

PPP4R1-211, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-211ENST00000578875 KRT24Q2M2I5 525 aa10.46□□□□□ -0.73
PPP4R1-211ENST00000578875 ANKRD18AQ8IVF6 992 aa10.46□□□□□ -0.73
PPP4R1-211ENST00000578875 TMEM39BQ9GZU3 492 aa10.46□□□□□ -0.73
PPP4R1-211ENST00000578875 NBPF3Q9H094 633 aa10.46□□□□□ -0.73
PPP4R1-211ENST00000578875 COL1A1P02452 1464 aaPredicted RBP10.46□□□□□ -0.74
PPP4R1-211ENST00000578875 MED23Q9ULK4 1368 aa10.45□□□□□ -0.74
PPP4R1-211ENST00000578875 CYP2C8P10632 490 aa10.45□□□□□ -0.74
PPP4R1-211ENST00000578875 RBM5P52756 815 aaKnown RBP eCLIP10.45□□□□□ -0.74
PPP4R1-211ENST00000578875 TRIM32Q13049 653 aa10.45□□□□□ -0.74
PPP4R1-211ENST00000578875 ALYREFQ86V81 257 aaKnown RBP10.45□□□□□ -0.74
PPP4R1-211ENST00000578875 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.45□□□□□ -0.74
PPP4R1-211ENST00000578875 PLBD2Q8NHP8 589 aa10.45□□□□□ -0.74
PPP4R1-211ENST00000578875 C11orf49Q9H6J7 331 aa10.45□□□□□ -0.74
PPP4R1-211ENST00000578875 TDRD3Q9H7E2 651 aaKnown RBP10.45□□□□□ -0.74
PPP4R1-211ENST00000578875 ZNF70Q9UC06 446 aaPredicted RBP10.45□□□□□ -0.74
PPP4R1-211ENST00000578875 TAOK2Q9UL54 1235 aa10.45□□□□□ -0.74
PPP4R1-211ENST00000578875 CSADQ9Y600 493 aa10.45□□□□□ -0.74
PPP4R1-211ENST00000578875 OTOFQ9HC10 1997 aa10.45□□□□□ -0.74
PPP4R1-211ENST00000578875 MUC3AQ02505 3323 aa10.44□□□□□ -0.74
PPP4R1-211ENST00000578875 TCP10L2B9ZVM9 353 aa10.44□□□□□ -0.74
PPP4R1-211ENST00000578875 MYO1BO43795 1136 aa10.44□□□□□ -0.74
PPP4R1-211ENST00000578875 FOSL2P15408 326 aa10.44□□□□□ -0.74
PPP4R1-211ENST00000578875 MMP14P50281 582 aa10.44□□□□□ -0.74
PPP4R1-211ENST00000578875 FCGRTP55899 365 aa10.44□□□□□ -0.74
PPP4R1-211ENST00000578875 SNAPC2Q13487 334 aa10.44□□□□□ -0.74
PPP4R1-211ENST00000578875 ERO1BQ86YB8 467 aa10.44□□□□□ -0.74
PPP4R1-211ENST00000578875 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.44□□□□□ -0.741e-10■■■■■ 30
PPP4R1-211ENST00000578875 CD209Q9NNX6 404 aa10.44□□□□□ -0.74
PPP4R1-211ENST00000578875 ZCCHC17Q9NP64 241 aaKnown RBP10.44□□□□□ -0.74
PPP4R1-211ENST00000578875 TSPYL4Q9UJ04 414 aa10.44□□□□□ -0.74
PPP4R1-211ENST00000578875 LAMA2P24043 3122 aaKnown RBP10.44□□□□□ -0.74
PPP4R1-211ENST00000578875 PFASO15067 1338 aa10.43□□□□□ -0.74
PPP4R1-211ENST00000578875 SYNGAP1Q96PV0 1343 aa10.43□□□□□ -0.74
PPP4R1-211ENST00000578875 BCRP11274 1271 aa10.43□□□□□ -0.74
PPP4R1-211ENST00000578875 MOGSQ13724 837 aa10.43□□□□□ -0.74
PPP4R1-211ENST00000578875 SHHQ15465 462 aa10.43□□□□□ -0.74
PPP4R1-211ENST00000578875 LRRC26Q2I0M4 334 aa10.43□□□□□ -0.74
PPP4R1-211ENST00000578875 CCDC152Q4G0S7 254 aa10.43□□□□□ -0.74
PPP4R1-211ENST00000578875 ZBTB38Q8NAP3 1195 aaPredicted RBP10.43□□□□□ -0.74
PPP4R1-211ENST00000578875 PXYLP1Q8TE99 480 aa10.43□□□□□ -0.74
PPP4R1-211ENST00000578875 CHPF2Q9P2E5 772 aa10.43□□□□□ -0.74
PPP4R1-211ENST00000578875 PDE8AO60658 829 aa10.42□□□□□ -0.74
PPP4R1-211ENST00000578875 EIF4G2P78344 907 aaKnown RBP eCLIP10.42□□□□□ -0.74
PPP4R1-211ENST00000578875 TRIM28Q13263 835 aaKnown RBP10.42□□□□□ -0.74
PPP4R1-211ENST00000578875 ANKRD23Q86SG2 305 aa10.42□□□□□ -0.74
PPP4R1-211ENST00000578875 PPM1EQ8WY54 764 aa10.42□□□□□ -0.74
PPP4R1-211ENST00000578875 BSDC1Q9NW68 430 aaPredicted RBP10.42□□□□□ -0.74
PPP4R1-211ENST00000578875 NUDCQ9Y266 331 aa10.42□□□□□ -0.74
PPP4R1-211ENST00000578875 COL2A1P02458 1487 aaPredicted RBP10.42□□□□□ -0.74
PPP4R1-211ENST00000578875 FAM205AQ6ZU69 1335 aa10.41□□□□□ -0.74
PPP4R1-211ENST00000578875 CACNB3P54284 484 aa10.41□□□□□ -0.74
PPP4R1-211ENST00000578875 SPDYE2Q495Y8 402 aa10.41□□□□□ -0.74
PPP4R1-211ENST00000578875 C9orf50Q5SZB4 431 aa10.41□□□□□ -0.74
PPP4R1-211ENST00000578875 GPAT2Q6NUI2 795 aa10.41□□□□□ -0.74
PPP4R1-211ENST00000578875 ADAMTS19Q8TE59 1207 aa10.41□□□□□ -0.74
PPP4R1-211ENST00000578875 NECAB3Q96P71 396 aaPredicted RBP10.41□□□□□ -0.74
PPP4R1-211ENST00000578875 PCGF6Q9BYE7 350 aa10.41□□□□□ -0.74
PPP4R1-211ENST00000578875 INPP5BP32019 993 aa10.4□□□□□ -0.74
PPP4R1-211ENST00000578875 PPIL2Q13356 520 aa10.4□□□□□ -0.74
PPP4R1-211ENST00000578875 IRF5Q13568 498 aa10.4□□□□□ -0.74
PPP4R1-211ENST00000578875 GRIN2CQ14957 1233 aa10.4□□□□□ -0.74
PPP4R1-211ENST00000578875 ANKLE1Q8NAG6 615 aa10.4□□□□□ -0.74
PPP4R1-211ENST00000578875 WRNIP1Q96S55 665 aa10.4□□□□□ -0.74
PPP4R1-211ENST00000578875 GREM2Q9H772 168 aa10.4□□□□□ -0.74
PPP4R1-211ENST00000578875 LEMD3Q9Y2U8 911 aa10.4□□□□□ -0.74
PPP4R1-211ENST00000578875 MIGA2Q7L4E1 593 aa10.39□□□□□ -0.75
PPP4R1-211ENST00000578875 TTLL11Q8NHH1 800 aa10.39□□□□□ -0.75
PPP4R1-211ENST00000578875 CFAP53Q96M91 514 aa10.39□□□□□ -0.75
PPP4R1-211ENST00000578875 LRFN3Q9BTN0 628 aa10.39□□□□□ -0.75
PPP4R1-211ENST00000578875 TNPO2O14787 897 aaKnown RBP10.38□□□□□ -0.75
PPP4R1-211ENST00000578875 PCCAP05165 728 aaPredicted RBP10.38□□□□□ -0.75
PPP4R1-211ENST00000578875 CAPN2P17655 700 aa10.38□□□□□ -0.75
PPP4R1-211ENST00000578875 TRIM26Q12899 539 aaPredicted RBP10.38□□□□□ -0.75
PPP4R1-211ENST00000578875 ASB2Q96Q27 587 aa10.38□□□□□ -0.75
PPP4R1-211ENST00000578875 PLEKHF1Q96S99 279 aa10.38□□□□□ -0.75
PPP4R1-211ENST00000578875 UHRF1Q96T88 793 aaPredicted RBP10.38□□□□□ -0.75
PPP4R1-211ENST00000578875 MYD88Q99836 296 aa10.38□□□□□ -0.75
PPP4R1-211ENST00000578875 EPHX3Q9H6B9 360 aa10.38□□□□□ -0.75
PPP4R1-211ENST00000578875 OGDHLQ9ULD0 1010 aa10.38□□□□□ -0.75
PPP4R1-211ENST00000578875 DOCK3Q8IZD9 2030 aa10.38□□□□□ -0.75
PPP4R1-211ENST00000578875 TAF5LO75529 589 aa10.37□□□□□ -0.75
PPP4R1-211ENST00000578875 COL6A1P12109 1028 aa10.37□□□□□ -0.75
PPP4R1-211ENST00000578875 PPATQ06203 517 aa10.37□□□□□ -0.75
PPP4R1-211ENST00000578875 TNFAIP1Q13829 316 aa10.37□□□□□ -0.75
PPP4R1-211ENST00000578875 NFE2L2Q16236 605 aa10.37□□□□□ -0.75
PPP4R1-211ENST00000578875 GRIK5Q16478 980 aa10.37□□□□□ -0.75
PPP4R1-211ENST00000578875 RIC3Q7Z5B4 369 aa10.37□□□□□ -0.75
PPP4R1-211ENST00000578875 DZIP1LQ8IYY4 767 aaKnown RBP10.37□□□□□ -0.75
PPP4R1-211ENST00000578875 CDC5LQ99459 802 aaKnown RBP10.37□□□□□ -0.75
PPP4R1-211ENST00000578875 LBHD1Q9BQE6 289 aaPredicted RBP10.37□□□□□ -0.75
PPP4R1-211ENST00000578875 HMX1Q9NP08 348 aaPredicted RBP10.37□□□□□ -0.75
PPP4R1-211ENST00000578875 PHAXQ9H814 394 aaKnown RBP10.36□□□□□ -0.75
PPP4R1-211ENST00000578875 KCNH4Q9UQ05 1017 aa10.36□□□□□ -0.75
PPP4R1-211ENST00000578875 MGAMO43451 1857 aa10.36□□□□□ -0.75
PPP4R1-211ENST00000578875 BDP1A6H8Y1 2624 aa10.36□□□□□ -0.75
PPP4R1-211ENST00000578875 DDX60LQ5H9U9 1706 aaKnown RBP10.36□□□□□ -0.75
PPP4R1-211ENST00000578875 NCOR1O75376 2440 aa10.35□□□□□ -0.75
PPP4R1-211ENST00000578875 DLG5Q8TDM6 1919 aa10.35□□□□□ -0.75
PPP4R1-211ENST00000578875 PIEZO1Q92508 2521 aa10.35□□□□□ -0.75
PPP4R1-211ENST00000578875 CTSWP56202 376 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms