RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 ZNF296Q8WUU4 475 aaPredicted RBP17.36■□□□□ 0.37
GTF3C1-211ENST00000569653 WNK4Q96J92 1243 aa17.36■□□□□ 0.37
GTF3C1-211ENST00000569653 MEIS3Q99687 375 aa17.36■□□□□ 0.37
GTF3C1-211ENST00000569653 LRRFIP2Q9Y608 721 aaKnown RBP17.36■□□□□ 0.37
GTF3C1-211ENST00000569653 MYO1BO43795 1136 aa17.35■□□□□ 0.37
GTF3C1-211ENST00000569653 TMEM39BQ9GZU3 492 aa17.35■□□□□ 0.37
GTF3C1-211ENST00000569653 PA2G4Q9UQ80 394 aaKnown RBP17.35■□□□□ 0.37
GTF3C1-211ENST00000569653 KIF16BQ96L93 1317 aa17.35■□□□□ 0.37
GTF3C1-211ENST00000569653 TCP10L2B9ZVM9 353 aa17.34■□□□□ 0.37
GTF3C1-211ENST00000569653 IGF2BP3O00425 579 aaKnown RBP eCLIP17.34■□□□□ 0.37
GTF3C1-211ENST00000569653 CT47B1P0C2W7 299 aaPredicted RBP17.34■□□□□ 0.37
GTF3C1-211ENST00000569653 UBTFL1P0CB47 393 aaPredicted RBP17.34■□□□□ 0.37
GTF3C1-211ENST00000569653 CTU1Q7Z7A3 348 aaKnown RBP17.34■□□□□ 0.37
GTF3C1-211ENST00000569653 SIL1Q9H173 461 aa17.34■□□□□ 0.37
GTF3C1-211ENST00000569653 GPR25O00155 361 aa17.33■□□□□ 0.36
GTF3C1-211ENST00000569653 CAVIN4Q5BKX8 364 aa17.33■□□□□ 0.36
GTF3C1-211ENST00000569653 DIEXFQ68CQ4 756 aaKnown RBP17.33■□□□□ 0.36
GTF3C1-211ENST00000569653 APOBEC3HQ6NTF7 200 aaKnown RBP17.33■□□□□ 0.36
GTF3C1-211ENST00000569653 VPS37DQ86XT2 251 aa17.33■□□□□ 0.36
GTF3C1-211ENST00000569653 CNKSR2Q8WXI2 1034 aa17.33■□□□□ 0.36
GTF3C1-211ENST00000569653 SLC10A4Q96EP9 437 aa17.33■□□□□ 0.36
GTF3C1-211ENST00000569653 CFHR5Q9BXR6 569 aa17.33■□□□□ 0.36
GTF3C1-211ENST00000569653 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.33■□□□□ 0.36
GTF3C1-211ENST00000569653 CENPFP49454 3210 aa17.32■□□□□ 0.36
GTF3C1-211ENST00000569653 PPP1R12BO60237 982 aaPredicted RBP17.32■□□□□ 0.36
GTF3C1-211ENST00000569653 IFIT1P09914 478 aaKnown RBP17.32■□□□□ 0.36
GTF3C1-211ENST00000569653 HDLBPQ00341 1268 aaKnown RBP17.32■□□□□ 0.36
GTF3C1-211ENST00000569653 SUPT20HL1Q3ZLR7 823 aa17.32■□□□□ 0.36
GTF3C1-211ENST00000569653 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.32■□□□□ 0.36
GTF3C1-211ENST00000569653 API5Q9BZZ5 524 aaKnown RBP17.32■□□□□ 0.36
GTF3C1-211ENST00000569653 ADORA1P30542 326 aa17.31■□□□□ 0.36
GTF3C1-211ENST00000569653 CAP1Q01518 475 aa17.31■□□□□ 0.36
GTF3C1-211ENST00000569653 SREBF2Q12772 1141 aa17.31■□□□□ 0.36
GTF3C1-211ENST00000569653 INTS3Q68E01 1043 aaKnown RBP17.31■□□□□ 0.36
GTF3C1-211ENST00000569653 IFNL1Q8IU54 200 aa17.31■□□□□ 0.36
GTF3C1-211ENST00000569653 TBC1D22AQ8WUA7 517 aa17.31■□□□□ 0.36
GTF3C1-211ENST00000569653 LPIN2Q92539 896 aa17.31■□□□□ 0.36
GTF3C1-211ENST00000569653 ZDHHC15Q96MV8 337 aa17.31■□□□□ 0.36
GTF3C1-211ENST00000569653 PTPN18Q99952 460 aa17.31■□□□□ 0.36
GTF3C1-211ENST00000569653 MYH2Q9UKX2 1941 aa17.31■□□□□ 0.36
GTF3C1-211ENST00000569653 PDE4DIPQ5VU43 2346 aa17.3■□□□□ 0.36
GTF3C1-211ENST00000569653 CIAO1O76071 339 aa17.3■□□□□ 0.36
GTF3C1-211ENST00000569653 ZBTB48P10074 688 aaPredicted RBP17.3■□□□□ 0.36
GTF3C1-211ENST00000569653 SLC5A1P13866 664 aa17.3■□□□□ 0.36
GTF3C1-211ENST00000569653 SOX10P56693 466 aa17.3■□□□□ 0.36
GTF3C1-211ENST00000569653 NOM1Q5C9Z4 860 aaKnown RBP17.3■□□□□ 0.36
GTF3C1-211ENST00000569653 TEKT1Q969V4 418 aa17.3■□□□□ 0.36
GTF3C1-211ENST00000569653 ELP3Q9H9T3 547 aa17.3■□□□□ 0.36
GTF3C1-211ENST00000569653 ZSWIM8A7E2V4 1837 aa17.29■□□□□ 0.36
GTF3C1-211ENST00000569653 MANSC4A6NHS7 340 aaPredicted RBP17.29■□□□□ 0.36
GTF3C1-211ENST00000569653 FRAT2O75474 233 aaPredicted RBP17.29■□□□□ 0.36
GTF3C1-211ENST00000569653 BCAR3O75815 825 aa17.29■□□□□ 0.36
GTF3C1-211ENST00000569653 PHKA1P46020 1223 aa17.29■□□□□ 0.36
GTF3C1-211ENST00000569653 IREB2P48200 963 aaKnown RBP17.29■□□□□ 0.36
GTF3C1-211ENST00000569653 TNFAIP1Q13829 316 aa17.29■□□□□ 0.36
GTF3C1-211ENST00000569653 ATP2B3Q16720 1220 aa17.29■□□□□ 0.36
GTF3C1-211ENST00000569653 ANKRD13AQ8IZ07 590 aa17.29■□□□□ 0.36
GTF3C1-211ENST00000569653 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.29■□□□□ 0.364e-9■■■□□ 16.2
GTF3C1-211ENST00000569653 COPRSQ9NQ92 184 aa17.29■□□□□ 0.36
GTF3C1-211ENST00000569653 HPS5Q9UPZ3 1129 aa17.29■□□□□ 0.36
GTF3C1-211ENST00000569653 UNCXA6NJT0 531 aa17.28■□□□□ 0.36
GTF3C1-211ENST00000569653 TRIM27P14373 513 aa17.28■□□□□ 0.36
GTF3C1-211ENST00000569653 PRDX5P30044 214 aa17.28■□□□□ 0.36
GTF3C1-211ENST00000569653 MLLT1Q03111 559 aaPredicted RBP17.28■□□□□ 0.36
GTF3C1-211ENST00000569653 VGLL4Q14135 290 aa17.28■□□□□ 0.36
GTF3C1-211ENST00000569653 DIXDC1Q155Q3 683 aa17.28■□□□□ 0.36
GTF3C1-211ENST00000569653 OPTNQ96CV9 577 aa17.28■□□□□ 0.36
GTF3C1-211ENST00000569653 MS4A4AQ96JQ5 239 aa17.28■□□□□ 0.36
GTF3C1-211ENST00000569653 MRIQ9BWK5 157 aa17.28■□□□□ 0.36
GTF3C1-211ENST00000569653 FBXO3Q9UK99 471 aa17.28■□□□□ 0.36
GTF3C1-211ENST00000569653 DAGLAQ9Y4D2 1042 aa17.28■□□□□ 0.36
GTF3C1-211ENST00000569653 AK9Q5TCS8 1911 aa17.27■□□□□ 0.36
GTF3C1-211ENST00000569653 TESPA1A2RU30 521 aaPredicted RBP17.27■□□□□ 0.36
GTF3C1-211ENST00000569653 HHIPL2Q6UWX4 724 aa17.27■□□□□ 0.36
GTF3C1-211ENST00000569653 ARHGAP45Q92619 1136 aa17.27■□□□□ 0.36
GTF3C1-211ENST00000569653 SUGT1Q9Y2Z0 365 aa17.27■□□□□ 0.36
GTF3C1-211ENST00000569653 CRHR2Q13324 411 aa17.26■□□□□ 0.35
GTF3C1-211ENST00000569653 BRI3BPQ8WY22 251 aa17.26■□□□□ 0.35
GTF3C1-211ENST00000569653 CEP126Q9P2H0 1117 aa17.26■□□□□ 0.35
GTF3C1-211ENST00000569653 SNCAIPQ9Y6H5 919 aa17.26■□□□□ 0.35
GTF3C1-211ENST00000569653 FKTNO75072 461 aa17.25■□□□□ 0.35
GTF3C1-211ENST00000569653 IL15P40933 162 aaPredicted RBP17.25■□□□□ 0.35
GTF3C1-211ENST00000569653 NFIAQ12857 509 aa17.25■□□□□ 0.35
GTF3C1-211ENST00000569653 MTX1Q13505 466 aa17.25■□□□□ 0.35
GTF3C1-211ENST00000569653 CDC42EP5Q6NZY7 148 aa17.25■□□□□ 0.35
GTF3C1-211ENST00000569653 FAM83AQ86UY5 434 aa17.25■□□□□ 0.35
GTF3C1-211ENST00000569653 MIER1Q8N108 512 aa17.25■□□□□ 0.35
GTF3C1-211ENST00000569653 WDR66Q8TBY9 1149 aa17.25■□□□□ 0.35
GTF3C1-211ENST00000569653 DOCK2Q92608 1830 aa17.25■□□□□ 0.35
GTF3C1-211ENST00000569653 RPAP1Q9BWH6 1393 aaPredicted RBP17.25■□□□□ 0.35
GTF3C1-211ENST00000569653 MKI67P46013 3256 aaKnown RBP17.24■□□□□ 0.35
GTF3C1-211ENST00000569653 TNNI2P48788 182 aa17.24■□□□□ 0.35
GTF3C1-211ENST00000569653 INHBEP58166 350 aa17.24■□□□□ 0.35
GTF3C1-211ENST00000569653 TIMM10P62072 90 aa17.24■□□□□ 0.35
GTF3C1-211ENST00000569653 MAP3K9P80192 1104 aa17.24■□□□□ 0.35
GTF3C1-211ENST00000569653 FKBP1CQ5VVH2 108 aa17.24■□□□□ 0.35
GTF3C1-211ENST00000569653 CCDC102BQ68D86 513 aa17.24■□□□□ 0.35
GTF3C1-211ENST00000569653 BRCA2P51587 3418 aa17.24■□□□□ 0.35
GTF3C1-211ENST00000569653 RFX7Q2KHR2 1363 aa17.24■□□□□ 0.35
GTF3C1-211ENST00000569653 MAST3O60307 1309 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms