RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 SNAPC2Q13487 334 aa8.82□□□□□ -1
HERPUD1-217ENST00000569429 DLGAP5Q15398 846 aa8.82□□□□□ -1
HERPUD1-217ENST00000569429 TAF7Q15545 349 aaPredicted RBP8.82□□□□□ -1
HERPUD1-217ENST00000569429 IL27Q8NEV9 243 aa8.82□□□□□ -1
HERPUD1-217ENST00000569429 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.82□□□□□ -1
HERPUD1-217ENST00000569429 EPHX3Q9H6B9 360 aa8.82□□□□□ -1
HERPUD1-217ENST00000569429 PANK3Q9H999 370 aa8.82□□□□□ -1
HERPUD1-217ENST00000569429 OGDHLQ9ULD0 1010 aa8.82□□□□□ -1
HERPUD1-217ENST00000569429 CSADQ9Y600 493 aa8.82□□□□□ -1
HERPUD1-217ENST00000569429 MED23Q9ULK4 1368 aa8.82□□□□□ -1
HERPUD1-217ENST00000569429 BRWD1Q9NSI6 2320 aa8.82□□□□□ -1
HERPUD1-217ENST00000569429 ARAP2Q8WZ64 1704 aa8.82□□□□□ -1
HERPUD1-217ENST00000569429 XDHP47989 1333 aa8.81□□□□□ -1
HERPUD1-217ENST00000569429 C5orf42Q9H799 3197 aa8.81□□□□□ -1
HERPUD1-217ENST00000569429 IRF6O14896 467 aa8.81□□□□□ -1
HERPUD1-217ENST00000569429 MYO1BO43795 1136 aa8.81□□□□□ -1
HERPUD1-217ENST00000569429 COL6A1P12109 1028 aa8.81□□□□□ -1
HERPUD1-217ENST00000569429 RASA3Q14644 834 aa8.81□□□□□ -1
HERPUD1-217ENST00000569429 TTLL5Q6EMB2 1281 aa8.81□□□□□ -1
HERPUD1-217ENST00000569429 MCM10Q7L590 875 aa8.81□□□□□ -1
HERPUD1-217ENST00000569429 ANKRD23Q86SG2 305 aa8.81□□□□□ -1
HERPUD1-217ENST00000569429 RTF1Q92541 710 aaKnown RBP8.81□□□□□ -1
HERPUD1-217ENST00000569429 TPRP12270 2363 aaKnown RBP8.81□□□□□ -1
HERPUD1-217ENST00000569429 BAHCC1Q9P281 2608 aa8.81□□□□□ -1
HERPUD1-217ENST00000569429 GRIN2CQ14957 1233 aa8.8□□□□□ -1
HERPUD1-217ENST00000569429 SHHQ15465 462 aa8.8□□□□□ -1
HERPUD1-217ENST00000569429 AKNAD1Q5T1N1 836 aa8.8□□□□□ -1
HERPUD1-217ENST00000569429 ERO1BQ86YB8 467 aa8.8□□□□□ -1
HERPUD1-217ENST00000569429 FBXW7Q969H0 707 aa8.8□□□□□ -1
HERPUD1-217ENST00000569429 PHACTR3Q96KR7 559 aa8.8□□□□□ -1
HERPUD1-217ENST00000569429 COA1Q9GZY4 146 aa8.8□□□□□ -1
HERPUD1-217ENST00000569429 CLRN2A0PK11 232 aa8.79□□□□□ -1
HERPUD1-217ENST00000569429 SPDYE2BA6NHP3 402 aa8.79□□□□□ -1
HERPUD1-217ENST00000569429 PDHXO00330 501 aa8.79□□□□□ -1
HERPUD1-217ENST00000569429 HTATSF1O43719 755 aaKnown RBP8.79□□□□□ -1
HERPUD1-217ENST00000569429 SPDYE6P0CI01 402 aa8.79□□□□□ -1
HERPUD1-217ENST00000569429 BMP1P13497 986 aa8.79□□□□□ -1
HERPUD1-217ENST00000569429 EIF4A1P60842 406 aaKnown RBP8.79□□□□□ -1
HERPUD1-217ENST00000569429 PPIL2Q13356 520 aa8.79□□□□□ -1
HERPUD1-217ENST00000569429 PDIA6Q15084 440 aa8.79□□□□□ -1
HERPUD1-217ENST00000569429 LRRC26Q2I0M4 334 aa8.79□□□□□ -1
HERPUD1-217ENST00000569429 NECAB3Q96P71 396 aaPredicted RBP8.79□□□□□ -1
HERPUD1-217ENST00000569429 VEZTQ9HBM0 779 aa8.79□□□□□ -1
HERPUD1-217ENST00000569429 C11orf16Q9NQ32 467 aa8.79□□□□□ -1
HERPUD1-217ENST00000569429 SEC31BQ9NQW1 1179 aa8.79□□□□□ -1
HERPUD1-217ENST00000569429 RIF1Q5UIP0 2472 aaKnown RBP8.79□□□□□ -1
HERPUD1-217ENST00000569429 CHD7Q9P2D1 2997 aa8.79□□□□□ -1
HERPUD1-217ENST00000569429 CHD8Q9HCK8 2581 aa8.78□□□□□ -1
HERPUD1-217ENST00000569429 DLG5Q8TDM6 1919 aa8.78□□□□□ -1
HERPUD1-217ENST00000569429 FRMPD3Q5JV73 1810 aa8.78□□□□□ -1
HERPUD1-217ENST00000569429 CHD9Q3L8U1 2897 aa8.78□□□□□ -1
HERPUD1-217ENST00000569429 TNFAIP1Q13829 316 aa8.78□□□□□ -1
HERPUD1-217ENST00000569429 C9orf50Q5SZB4 431 aa8.78□□□□□ -1
HERPUD1-217ENST00000569429 PNISRQ8TF01 805 aaKnown RBP8.78□□□□□ -1
HERPUD1-217ENST00000569429 FAM89AQ96GI7 184 aa8.78□□□□□ -1
HERPUD1-217ENST00000569429 PRMT6Q96LA8 375 aaPredicted RBP8.78□□□□□ -1
HERPUD1-217ENST00000569429 TEPSINQ96N21 525 aa8.78□□□□□ -1
HERPUD1-217ENST00000569429 THUMPD2Q9BTF0 503 aaKnown RBP8.78□□□□□ -1
HERPUD1-217ENST00000569429 HMX1Q9NP08 348 aaPredicted RBP8.78□□□□□ -1
HERPUD1-217ENST00000569429 MIS18AQ9NYP9 233 aa8.78□□□□□ -1
HERPUD1-217ENST00000569429 PCDHAC2Q9Y5I4 1007 aa8.78□□□□□ -1
HERPUD1-217ENST00000569429 SNCAIPQ9Y6H5 919 aa8.78□□□□□ -1
HERPUD1-217ENST00000569429 EPG5Q9HCE0 2579 aa8.77□□□□□ -1
HERPUD1-217ENST00000569429 PRRC2BQ5JSZ5 2229 aaKnown RBP8.77□□□□□ -1.01
HERPUD1-217ENST00000569429 PLXNA1Q9UIW2 1896 aa8.77□□□□□ -1.01
HERPUD1-217ENST00000569429 TNPO2O14787 897 aaKnown RBP8.77□□□□□ -1.01
HERPUD1-217ENST00000569429 HMGCRP04035 888 aa8.77□□□□□ -1.01
HERPUD1-217ENST00000569429 NHLH1Q02575 133 aa8.77□□□□□ -1.01
HERPUD1-217ENST00000569429 DCTN1Q14203 1278 aa8.77□□□□□ -1.01
HERPUD1-217ENST00000569429 CFAP100Q494V2 611 aa8.77□□□□□ -1.01
HERPUD1-217ENST00000569429 NCBP3Q53F19 620 aaKnown RBP8.77□□□□□ -1.01
HERPUD1-217ENST00000569429 POTEEQ6S8J3 1075 aa8.77□□□□□ -1.01
HERPUD1-217ENST00000569429 PARK7Q99497 189 aaKnown RBP8.77□□□□□ -1.01
HERPUD1-217ENST00000569429 PTPRFP10586 1907 aa8.77□□□□□ -1.01
HERPUD1-217ENST00000569429 SPEF2Q9C093 1822 aa8.77□□□□□ -1.01
HERPUD1-217ENST00000569429 FAM186AA6NE01 2351 aa8.77□□□□□ -1.01
HERPUD1-217ENST00000569429 CACNA1HO95180 2353 aa8.77□□□□□ -1.01
HERPUD1-217ENST00000569429 RLFQ13129 1914 aa8.76□□□□□ -1.01
HERPUD1-217ENST00000569429 IRS4O14654 1257 aaPredicted RBP8.76□□□□□ -1.01
HERPUD1-217ENST00000569429 U2SURPO15042 1029 aaKnown RBP8.76□□□□□ -1.01
HERPUD1-217ENST00000569429 PPATQ06203 517 aa8.76□□□□□ -1.01
HERPUD1-217ENST00000569429 COPS6Q7L5N1 327 aa8.76□□□□□ -1.01
HERPUD1-217ENST00000569429 PPM1EQ8WY54 764 aa8.76□□□□□ -1.01
HERPUD1-217ENST00000569429 DCHS1Q96JQ0 3298 aa8.76□□□□□ -1.01
HERPUD1-217ENST00000569429 AOX1Q06278 1338 aa8.76□□□□□ -1.01
HERPUD1-217ENST00000569429 MYH3P11055 1940 aa8.76□□□□□ -1.01
HERPUD1-217ENST00000569429 SMIM22K7EJ46 135 aa8.75□□□□□ -1.01
HERPUD1-217ENST00000569429 U2AF1L5P0DN76 240 aaPredicted RBP8.75□□□□□ -1.01
HERPUD1-217ENST00000569429 PRKAR2BP31323 418 aa8.75□□□□□ -1.01
HERPUD1-217ENST00000569429 GTF2IP78347 998 aa8.75□□□□□ -1.01
HERPUD1-217ENST00000569429 U2AF1Q01081 240 aaKnown RBP eCLIP8.75□□□□□ -1.01
HERPUD1-217ENST00000569429 MOGSQ13724 837 aa8.75□□□□□ -1.01
HERPUD1-217ENST00000569429 PROSER3Q2NL68 480 aa8.75□□□□□ -1.01
HERPUD1-217ENST00000569429 CDAN1Q8IWY9 1227 aa8.75□□□□□ -1.01
HERPUD1-217ENST00000569429 ZBTB38Q8NAP3 1195 aaPredicted RBP8.75□□□□□ -1.01
HERPUD1-217ENST00000569429 GAS2L1Q99501 681 aaPredicted RBP8.75□□□□□ -1.01
HERPUD1-217ENST00000569429 POLR3GLQ9BT43 218 aa8.75□□□□□ -1.01
HERPUD1-217ENST00000569429 ISCA1Q9BUE6 129 aa8.75□□□□□ -1.01
HERPUD1-217ENST00000569429 RSPH6AQ9H0K4 717 aa8.75□□□□□ -1.01
HERPUD1-217ENST00000569429 KCNH6Q9H252 994 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms