RNA–Protein interactions for RNA: ENST00000568977.1

CPNE7-209, Transcript of copine 7, humanhuman

TSL 5

Gene CPNE7, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-209ENST00000568977 CIAO1O76071 339 aa23.2■■□□□ 1.3
CPNE7-209ENST00000568977 SUPT20HL1Q3ZLR7 823 aa23.2■■□□□ 1.3
CPNE7-209ENST00000568977 NBPF12Q5TAG4 269 aaPredicted RBP23.2■■□□□ 1.3
CPNE7-209ENST00000568977 INTS3Q68E01 1043 aaKnown RBP23.2■■□□□ 1.3
CPNE7-209ENST00000568977 LPIN2Q92539 896 aa23.2■■□□□ 1.3
CPNE7-209ENST00000568977 PPP1R12BO60237 982 aaPredicted RBP23.19■■□□□ 1.3
CPNE7-209ENST00000568977 DGKZQ13574 1117 aa23.19■■□□□ 1.3
CPNE7-209ENST00000568977 HDLBPQ00341 1268 aaKnown RBP23.18■■□□□ 1.3
CPNE7-209ENST00000568977 ATP2B3Q16720 1220 aa23.18■■□□□ 1.3
CPNE7-209ENST00000568977 MIER1Q8N108 512 aa23.18■■□□□ 1.3
CPNE7-209ENST00000568977 PA2G4Q9UQ80 394 aaKnown RBP23.18■■□□□ 1.3
CPNE7-209ENST00000568977 TRIM27P14373 513 aa23.17■■□□□ 1.3
CPNE7-209ENST00000568977 SREBF2Q12772 1141 aa23.17■■□□□ 1.3
CPNE7-209ENST00000568977 SPRYD7Q5W111 196 aa23.17■■□□□ 1.3
CPNE7-209ENST00000568977 TEKT1Q969V4 418 aa23.17■■□□□ 1.3
CPNE7-209ENST00000568977 CLMNQ96JQ2 1002 aa23.17■■□□□ 1.3
CPNE7-209ENST00000568977 CEP126Q9P2H0 1117 aa23.17■■□□□ 1.3
CPNE7-209ENST00000568977 MAST3O60307 1309 aa23.16■■□□□ 1.3
CPNE7-209ENST00000568977 IL15P40933 162 aaPredicted RBP23.16■■□□□ 1.3
CPNE7-209ENST00000568977 TM4SF4P48230 202 aa23.16■■□□□ 1.3
CPNE7-209ENST00000568977 HNRNPUQ00839 825 aaKnown RBP eCLIP23.16■■□□□ 1.3
CPNE7-209ENST00000568977 DIEXFQ68CQ4 756 aaKnown RBP23.16■■□□□ 1.3
CPNE7-209ENST00000568977 COPRSQ9NQ92 184 aa23.16■■□□□ 1.3
CPNE7-209ENST00000568977 TNNQ9UQP3 1299 aa23.16■■□□□ 1.3
CPNE7-209ENST00000568977 SUGT1Q9Y2Z0 365 aa23.16■■□□□ 1.3
CPNE7-209ENST00000568977 TCP10L2B9ZVM9 353 aa23.15■■□□□ 1.3
CPNE7-209ENST00000568977 IPO8O15397 1037 aaKnown RBP23.15■■□□□ 1.3
CPNE7-209ENST00000568977 BCAR3O75815 825 aa23.15■■□□□ 1.3
CPNE7-209ENST00000568977 GNAI3P08754 354 aa23.15■■□□□ 1.3
CPNE7-209ENST00000568977 ATF7IPQ6VMQ6 1270 aa23.15■■□□□ 1.3
CPNE7-209ENST00000568977 CDAN1Q8IWY9 1227 aa23.15■■□□□ 1.3
CPNE7-209ENST00000568977 FRAT1Q92837 279 aaPredicted RBP23.15■■□□□ 1.3
CPNE7-209ENST00000568977 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.15■■□□□ 1.3
CPNE7-209ENST00000568977 CCDC85CA6NKD9 419 aa23.14■■□□□ 1.29
CPNE7-209ENST00000568977 IREB2P48200 963 aaKnown RBP23.14■■□□□ 1.29
CPNE7-209ENST00000568977 TNNI2P48788 182 aa23.14■■□□□ 1.29
CPNE7-209ENST00000568977 WDR66Q8TBY9 1149 aa23.14■■□□□ 1.29
CPNE7-209ENST00000568977 SLC10A4Q96EP9 437 aa23.14■■□□□ 1.29
CPNE7-209ENST00000568977 ZDHHC15Q96MV8 337 aa23.14■■□□□ 1.29
CPNE7-209ENST00000568977 TEPSINQ96N21 525 aa23.14■■□□□ 1.29
CPNE7-209ENST00000568977 UNCXA6NJT0 531 aa23.13■■□□□ 1.29
CPNE7-209ENST00000568977 USP2O75604 605 aaPredicted RBP23.13■■□□□ 1.29
CPNE7-209ENST00000568977 ZBTB48P10074 688 aaPredicted RBP23.13■■□□□ 1.29
CPNE7-209ENST00000568977 WNK4Q96J92 1243 aa23.13■■□□□ 1.29
CPNE7-209ENST00000568977 TMEM39BQ9GZU3 492 aa23.13■■□□□ 1.29
CPNE7-209ENST00000568977 TBC1D8O95759 1140 aa23.12■■□□□ 1.29
CPNE7-209ENST00000568977 CACNB3P54284 484 aa23.12■■□□□ 1.29
CPNE7-209ENST00000568977 MTX1Q13505 466 aa23.12■■□□□ 1.29
CPNE7-209ENST00000568977 ANKRD13AQ8IZ07 590 aa23.12■■□□□ 1.29
CPNE7-209ENST00000568977 MANSC4A6NHS7 340 aaPredicted RBP23.11■■□□□ 1.29
CPNE7-209ENST00000568977 SRGAP3O43295 1099 aa23.11■■□□□ 1.29
CPNE7-209ENST00000568977 CLUAP1Q96AJ1 413 aa23.11■■□□□ 1.29
CPNE7-209ENST00000568977 MRIQ9BWK5 157 aa23.11■■□□□ 1.29
CPNE7-209ENST00000568977 GNL3LQ9NVN8 582 aaKnown RBP23.11■■□□□ 1.29
CPNE7-209ENST00000568977 TMOD2Q9NZR1 351 aa23.11■■□□□ 1.29
CPNE7-209ENST00000568977 PHKA1P46020 1223 aa23.1■■□□□ 1.29
CPNE7-209ENST00000568977 APOBEC3HQ6NTF7 200 aaKnown RBP23.1■■□□□ 1.29
CPNE7-209ENST00000568977 HHIPL2Q6UWX4 724 aa23.1■■□□□ 1.29
CPNE7-209ENST00000568977 PRDX5P30044 214 aa23.09■■□□□ 1.29
CPNE7-209ENST00000568977 ADORA1P30542 326 aa23.09■■□□□ 1.29
CPNE7-209ENST00000568977 CTU1Q7Z7A3 348 aaKnown RBP23.09■■□□□ 1.29
CPNE7-209ENST00000568977 ZNF296Q8WUU4 475 aaPredicted RBP23.09■■□□□ 1.29
CPNE7-209ENST00000568977 SEMA3EO15041 775 aa23.08■■□□□ 1.29
CPNE7-209ENST00000568977 GJA5P36382 358 aa23.08■■□□□ 1.29
CPNE7-209ENST00000568977 ZKSCAN2Q63HK3 967 aa23.08■■□□□ 1.29
CPNE7-209ENST00000568977 CFHR5Q9BXR6 569 aa23.08■■□□□ 1.29
CPNE7-209ENST00000568977 RPAP1Q9BWH6 1393 aaPredicted RBP23.08■■□□□ 1.29
CPNE7-209ENST00000568977 SALL1Q9NSC2 1324 aa23.08■■□□□ 1.28
CPNE7-209ENST00000568977 GNAI2P04899 355 aa23.07■■□□□ 1.28
CPNE7-209ENST00000568977 DIXDC1Q155Q3 683 aa23.07■■□□□ 1.28
CPNE7-209ENST00000568977 NOM1Q5C9Z4 860 aaKnown RBP23.07■■□□□ 1.28
CPNE7-209ENST00000568977 FKBP1CQ5VVH2 108 aa23.07■■□□□ 1.28
CPNE7-209ENST00000568977 CCDC102BQ68D86 513 aa23.07■■□□□ 1.28
CPNE7-209ENST00000568977 FAM83AQ86UY5 434 aa23.07■■□□□ 1.28
CPNE7-209ENST00000568977 IFNL1Q8IU54 200 aa23.07■■□□□ 1.28
CPNE7-209ENST00000568977 ELP3Q9H9T3 547 aa23.07■■□□□ 1.28
CPNE7-209ENST00000568977 DENND2AQ9ULE3 1009 aa23.07■■□□□ 1.28
CPNE7-209ENST00000568977 GPR25O00155 361 aa23.06■■□□□ 1.28
CPNE7-209ENST00000568977 ALDH1A1P00352 501 aa23.06■■□□□ 1.28
CPNE7-209ENST00000568977 INHBEP58166 350 aa23.06■■□□□ 1.28
CPNE7-209ENST00000568977 TMEM57Q8N5G2 664 aa23.06■■□□□ 1.28
CPNE7-209ENST00000568977 DAGLAQ9Y4D2 1042 aa23.06■■□□□ 1.28
CPNE7-209ENST00000568977 A0A1B0GUL7 405 aa23.05■■□□□ 1.28
CPNE7-209ENST00000568977 IGF2BP3O00425 579 aaKnown RBP eCLIP23.05■■□□□ 1.28
CPNE7-209ENST00000568977 ZBTB22O15209 634 aa23.05■■□□□ 1.28
CPNE7-209ENST00000568977 LDHBP07195 334 aaKnown RBP23.05■■□□□ 1.28
CPNE7-209ENST00000568977 TFCP2Q12800 502 aa23.05■■□□□ 1.28
CPNE7-209ENST00000568977 VGLL4Q14135 290 aa23.05■■□□□ 1.28
CPNE7-209ENST00000568977 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.05■■□□□ 1.28
CPNE7-209ENST00000568977 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.05■■□□□ 1.284e-10■■■□□ 18.4
CPNE7-209ENST00000568977 OPTNQ96CV9 577 aa23.05■■□□□ 1.28
CPNE7-209ENST00000568977 R3HDMLQ9H3Y0 253 aa23.05■■□□□ 1.28
CPNE7-209ENST00000568977 MYH2Q9UKX2 1941 aa23.05■■□□□ 1.28
CPNE7-209ENST00000568977 TIMM10P62072 90 aa23.04■■□□□ 1.28
CPNE7-209ENST00000568977 RASGRF1Q13972 1273 aa23.04■■□□□ 1.28
CPNE7-209ENST00000568977 AKAP2Q9Y2D5 859 aa23.04■■□□□ 1.28
CPNE7-209ENST00000568977 PNMA6EA0A0J9YXQ4 647 aa23.03■■□□□ 1.28
CPNE7-209ENST00000568977 MAP3K9P80192 1104 aa23.03■■□□□ 1.28
CPNE7-209ENST00000568977 CSADQ9Y600 493 aa23.03■■□□□ 1.28
CPNE7-209ENST00000568977 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms