RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 AKAP11Q9UKA4 1901 aa23.64■■□□□ 1.37
SPSB3-210ENST00000568416 USP2O75604 605 aaPredicted RBP23.63■■□□□ 1.37
SPSB3-210ENST00000568416 TBC1D8O95759 1140 aa23.63■■□□□ 1.37
SPSB3-210ENST00000568416 LPIN2Q92539 896 aa23.63■■□□□ 1.37
SPSB3-210ENST00000568416 ARHGAP45Q92619 1136 aa23.63■■□□□ 1.37
SPSB3-210ENST00000568416 SLC10A4Q96EP9 437 aa23.63■■□□□ 1.37
SPSB3-210ENST00000568416 CLMNQ96JQ2 1002 aa23.63■■□□□ 1.37
SPSB3-210ENST00000568416 CIAO1O76071 339 aa23.62■■□□□ 1.37
SPSB3-210ENST00000568416 SLC5A1P13866 664 aa23.62■■□□□ 1.37
SPSB3-210ENST00000568416 TEPSINQ96N21 525 aa23.62■■□□□ 1.37
SPSB3-210ENST00000568416 MRIQ9BWK5 157 aa23.62■■□□□ 1.37
SPSB3-210ENST00000568416 HDAC5Q9UQL6 1122 aa23.62■■□□□ 1.37
SPSB3-210ENST00000568416 LRRFIP2Q9Y608 721 aaKnown RBP23.62■■□□□ 1.37
SPSB3-210ENST00000568416 ZBTB48P10074 688 aaPredicted RBP23.61■■□□□ 1.37
SPSB3-210ENST00000568416 WNK4Q96J92 1243 aa23.61■■□□□ 1.37
SPSB3-210ENST00000568416 MEIS3Q99687 375 aa23.61■■□□□ 1.37
SPSB3-210ENST00000568416 CFHR5Q9BXR6 569 aa23.61■■□□□ 1.37
SPSB3-210ENST00000568416 SUGT1Q9Y2Z0 365 aa23.61■■□□□ 1.37
SPSB3-210ENST00000568416 TCP10L2B9ZVM9 353 aa23.6■■□□□ 1.37
SPSB3-210ENST00000568416 IREB2P48200 963 aaKnown RBP23.6■■□□□ 1.37
SPSB3-210ENST00000568416 NOM1Q5C9Z4 860 aaKnown RBP23.6■■□□□ 1.37
SPSB3-210ENST00000568416 INTS3Q68E01 1043 aaKnown RBP23.6■■□□□ 1.37
SPSB3-210ENST00000568416 CTU1Q7Z7A3 348 aaKnown RBP23.6■■□□□ 1.37
SPSB3-210ENST00000568416 TEKT1Q969V4 418 aa23.6■■□□□ 1.37
SPSB3-210ENST00000568416 SIL1Q9H173 461 aa23.6■■□□□ 1.37
SPSB3-210ENST00000568416 MANSC4A6NHS7 340 aaPredicted RBP23.59■■□□□ 1.37
SPSB3-210ENST00000568416 TNNI2P48788 182 aa23.59■■□□□ 1.37
SPSB3-210ENST00000568416 RGS19P49795 217 aa23.59■■□□□ 1.37
SPSB3-210ENST00000568416 CDAN1Q8IWY9 1227 aa23.59■■□□□ 1.37
SPSB3-210ENST00000568416 ANKRD13AQ8IZ07 590 aa23.59■■□□□ 1.37
SPSB3-210ENST00000568416 ZNF296Q8WUU4 475 aaPredicted RBP23.59■■□□□ 1.37
SPSB3-210ENST00000568416 ZDHHC15Q96MV8 337 aa23.59■■□□□ 1.37
SPSB3-210ENST00000568416 INHBEP58166 350 aa23.58■■□□□ 1.37
SPSB3-210ENST00000568416 ATP2B3Q16720 1220 aa23.58■■□□□ 1.37
SPSB3-210ENST00000568416 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.58■■□□□ 1.37
SPSB3-210ENST00000568416 CEP126Q9P2H0 1117 aa23.58■■□□□ 1.37
SPSB3-210ENST00000568416 MAST3O60307 1309 aa23.58■■□□□ 1.36
SPSB3-210ENST00000568416 GPR25O00155 361 aa23.57■■□□□ 1.36
SPSB3-210ENST00000568416 IL15P40933 162 aaPredicted RBP23.57■■□□□ 1.36
SPSB3-210ENST00000568416 WDR66Q8TBY9 1149 aa23.57■■□□□ 1.36
SPSB3-210ENST00000568416 TMEM39BQ9GZU3 492 aa23.57■■□□□ 1.36
SPSB3-210ENST00000568416 COPRSQ9NQ92 184 aa23.57■■□□□ 1.36
SPSB3-210ENST00000568416 PA2G4Q9UQ80 394 aaKnown RBP23.57■■□□□ 1.36
SPSB3-210ENST00000568416 ALDH1A1P00352 501 aa23.56■■□□□ 1.36
SPSB3-210ENST00000568416 GJA5P36382 358 aa23.56■■□□□ 1.36
SPSB3-210ENST00000568416 APOBEC3HQ6NTF7 200 aaKnown RBP23.56■■□□□ 1.36
SPSB3-210ENST00000568416 IFNL1Q8IU54 200 aa23.56■■□□□ 1.36
SPSB3-210ENST00000568416 R3HDMLQ9H3Y0 253 aa23.56■■□□□ 1.36
SPSB3-210ENST00000568416 CACNB3P54284 484 aa23.55■■□□□ 1.36
SPSB3-210ENST00000568416 HHIPL2Q6UWX4 724 aa23.55■■□□□ 1.36
SPSB3-210ENST00000568416 GNAI3P08754 354 aa23.54■■□□□ 1.36
SPSB3-210ENST00000568416 IGF2BP3O00425 579 aaKnown RBP eCLIP23.53■■□□□ 1.36
SPSB3-210ENST00000568416 ZBTB22O15209 634 aa23.53■■□□□ 1.36
SPSB3-210ENST00000568416 TRIM27P14373 513 aa23.53■■□□□ 1.36
SPSB3-210ENST00000568416 MTX1Q13505 466 aa23.53■■□□□ 1.36
SPSB3-210ENST00000568416 FKBP1CQ5VVH2 108 aa23.53■■□□□ 1.36
SPSB3-210ENST00000568416 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.53■■□□□ 1.36
SPSB3-210ENST00000568416 FAM83AQ86UY5 434 aa23.53■■□□□ 1.36
SPSB3-210ENST00000568416 ELP3Q9H9T3 547 aa23.53■■□□□ 1.36
SPSB3-210ENST00000568416 TNNQ9UQP3 1299 aa23.53■■□□□ 1.36
SPSB3-210ENST00000568416 LAMB1P07942 1786 aa23.52■■□□□ 1.36
SPSB3-210ENST00000568416 IPO8O15397 1037 aaKnown RBP23.52■■□□□ 1.36
SPSB3-210ENST00000568416 BCAR3O75815 825 aa23.52■■□□□ 1.36
SPSB3-210ENST00000568416 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.52■■□□□ 1.36
SPSB3-210ENST00000568416 GNL3LQ9NVN8 582 aaKnown RBP23.52■■□□□ 1.36
SPSB3-210ENST00000568416 TMOD2Q9NZR1 351 aa23.52■■□□□ 1.36
SPSB3-210ENST00000568416 TESPA1A2RU30 521 aaPredicted RBP23.51■■□□□ 1.35
SPSB3-210ENST00000568416 FKTNO75072 461 aa23.51■■□□□ 1.35
SPSB3-210ENST00000568416 PHKA1P46020 1223 aa23.51■■□□□ 1.35
SPSB3-210ENST00000568416 MAP3K9P80192 1104 aa23.51■■□□□ 1.35
SPSB3-210ENST00000568416 MLLT1Q03111 559 aaPredicted RBP23.51■■□□□ 1.35
SPSB3-210ENST00000568416 PKN2Q16513 984 aaKnown RBP23.51■■□□□ 1.35
SPSB3-210ENST00000568416 ATF7IPQ6VMQ6 1270 aa23.51■■□□□ 1.35
SPSB3-210ENST00000568416 OPTNQ96CV9 577 aa23.51■■□□□ 1.35
SPSB3-210ENST00000568416 SALL1Q9NSC2 1324 aa23.51■■□□□ 1.35
SPSB3-210ENST00000568416 SEMA3EO15041 775 aa23.5■■□□□ 1.35
SPSB3-210ENST00000568416 SRGAP3O43295 1099 aa23.5■■□□□ 1.35
SPSB3-210ENST00000568416 PRDX5P30044 214 aa23.5■■□□□ 1.35
SPSB3-210ENST00000568416 VGLL4Q14135 290 aa23.5■■□□□ 1.35
SPSB3-210ENST00000568416 DENND2AQ9ULE3 1009 aa23.5■■□□□ 1.35
SPSB3-210ENST00000568416 OTOFQ9HC10 1997 aa23.5■■□□□ 1.35
SPSB3-210ENST00000568416 ADORA1P30542 326 aa23.49■■□□□ 1.35
SPSB3-210ENST00000568416 FRAT1Q92837 279 aaPredicted RBP23.49■■□□□ 1.35
SPSB3-210ENST00000568416 HPS5Q9UPZ3 1129 aa23.49■■□□□ 1.35
SPSB3-210ENST00000568416 DAGLAQ9Y4D2 1042 aa23.49■■□□□ 1.35
SPSB3-210ENST00000568416 RPAP1Q9BWH6 1393 aaPredicted RBP23.49■■□□□ 1.35
SPSB3-210ENST00000568416 DIXDC1Q155Q3 683 aa23.48■■□□□ 1.35
SPSB3-210ENST00000568416 CCDC102BQ68D86 513 aa23.48■■□□□ 1.35
SPSB3-210ENST00000568416 MIER1Q8N108 512 aa23.48■■□□□ 1.35
SPSB3-210ENST00000568416 CNKSR2Q8WXI2 1034 aa23.48■■□□□ 1.35
SPSB3-210ENST00000568416 MS4A4AQ96JQ5 239 aa23.48■■□□□ 1.35
SPSB3-210ENST00000568416 PTPN18Q99952 460 aa23.48■■□□□ 1.35
SPSB3-210ENST00000568416 LDHBP07195 334 aaKnown RBP23.47■■□□□ 1.35
SPSB3-210ENST00000568416 TIMM10P62072 90 aa23.47■■□□□ 1.35
SPSB3-210ENST00000568416 OTUD7BQ6GQQ9 843 aa23.47■■□□□ 1.35
SPSB3-210ENST00000568416 CSADQ9Y600 493 aa23.47■■□□□ 1.35
SPSB3-210ENST00000568416 TFCP2Q12800 502 aa23.46■■□□□ 1.35
SPSB3-210ENST00000568416 CDC42EP5Q6NZY7 148 aa23.46■■□□□ 1.35
SPSB3-210ENST00000568416 FAM151AQ8WW52 585 aa23.46■■□□□ 1.35
SPSB3-210ENST00000568416 CLUAP1Q96AJ1 413 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms