RNA–Protein interactions for RNA: ENST00000567143.1

GINS3-206, Transcript of GINS complex subunit 3, humanhuman

Gene GINS3, Length 3,202 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-206ENST00000567143 SLC16A10Q8TF71 515 aa7.55□□□□□ -1.2
GINS3-206ENST00000567143 IFNKQ9P0W0 207 aa7.55□□□□□ -1.2
GINS3-206ENST00000567143 CFAP45Q9UL16 551 aa7.55□□□□□ -1.2
GINS3-206ENST00000567143 CLIC4Q9Y696 253 aa7.55□□□□□ -1.2
GINS3-206ENST00000567143 A1BGP04217 495 aa7.54□□□□□ -1.2
GINS3-206ENST00000567143 NDUFA8P51970 172 aa7.54□□□□□ -1.2
GINS3-206ENST00000567143 MTX1Q13505 466 aa7.54□□□□□ -1.2
GINS3-206ENST00000567143 GNL2Q13823 731 aaKnown RBP7.54□□□□□ -1.2
GINS3-206ENST00000567143 TXNRD1Q16881 649 aa7.54□□□□□ -1.2
GINS3-206ENST00000567143 LRRC8AQ8IWT6 810 aa7.54□□□□□ -1.2
GINS3-206ENST00000567143 FLAD1Q8NFF5 587 aa7.54□□□□□ -1.2
GINS3-206ENST00000567143 SGIP1Q9BQI5 828 aa7.54□□□□□ -1.2
GINS3-206ENST00000567143 MYL10Q9BUA6 226 aa7.54□□□□□ -1.2
GINS3-206ENST00000567143 INCENPQ9NQS7 918 aa7.54□□□□□ -1.2
GINS3-206ENST00000567143 ZNF609O15014 1411 aa7.54□□□□□ -1.2
GINS3-206ENST00000567143 IFIT1P09914 478 aaKnown RBP7.54□□□□□ -1.2
GINS3-206ENST00000567143 SYT10Q6XYQ8 523 aa7.54□□□□□ -1.2
GINS3-206ENST00000567143 CCAR2Q8N163 923 aaKnown RBP7.54□□□□□ -1.2
GINS3-206ENST00000567143 SYNE4Q8N205 404 aa7.54□□□□□ -1.2
GINS3-206ENST00000567143 EPC1Q9H2F5 836 aa7.54□□□□□ -1.2
GINS3-206ENST00000567143 TOMM22Q9NS69 142 aa7.54□□□□□ -1.2
GINS3-206ENST00000567143 GOLGA8BA8MQT2 603 aa7.54□□□□□ -1.2
GINS3-206ENST00000567143 KCNQ2O43526 872 aa7.54□□□□□ -1.2
GINS3-206ENST00000567143 ATP1A3P13637 1013 aa7.54□□□□□ -1.2
GINS3-206ENST00000567143 ADORA1P30542 326 aa7.54□□□□□ -1.2
GINS3-206ENST00000567143 DMTNQ08495 405 aa7.54□□□□□ -1.2
GINS3-206ENST00000567143 SF3B2Q13435 895 aaKnown RBP7.54□□□□□ -1.2
GINS3-206ENST00000567143 PLA2G4DQ86XP0 818 aa7.54□□□□□ -1.2
GINS3-206ENST00000567143 TEX13AQ9BXU3 409 aaPredicted RBP7.54□□□□□ -1.2
GINS3-206ENST00000567143 PAG1Q9NWQ8 432 aa7.54□□□□□ -1.2
GINS3-206ENST00000567143 PCDHA7Q9UN72 937 aa7.54□□□□□ -1.2
GINS3-206ENST00000567143 CACNA1FO60840 1977 aa7.53□□□□□ -1.2
GINS3-206ENST00000567143 KLF18A0A0U1RQI7 1052 aa7.53□□□□□ -1.2
GINS3-206ENST00000567143 E7EWF7 191 aa7.53□□□□□ -1.2
GINS3-206ENST00000567143 APBA3O96018 575 aa7.53□□□□□ -1.2
GINS3-206ENST00000567143 STX1AQ16623 288 aa7.53□□□□□ -1.2
GINS3-206ENST00000567143 ERCC6LQ2NKX8 1250 aa7.53□□□□□ -1.2
GINS3-206ENST00000567143 TAF7LQ5H9L4 462 aa7.53□□□□□ -1.2
GINS3-206ENST00000567143 DHX32Q7L7V1 743 aaKnown RBP7.53□□□□□ -1.2
GINS3-206ENST00000567143 CREBRFQ8IUR6 639 aa7.53□□□□□ -1.2
GINS3-206ENST00000567143 CEP57L1Q8IYX8 460 aa7.53□□□□□ -1.2
GINS3-206ENST00000567143 TDRD7Q8NHU6 1098 aaKnown RBP7.53□□□□□ -1.2
GINS3-206ENST00000567143 METTL22Q9BUU2 404 aaPredicted RBP7.53□□□□□ -1.2
GINS3-206ENST00000567143 ZSWIM4Q9H7M6 989 aa7.53□□□□□ -1.2
GINS3-206ENST00000567143 LRRC4BQ9NT99 713 aa7.53□□□□□ -1.2
GINS3-206ENST00000567143 U3KPZ7 1027 aaPredicted RBP7.53□□□□□ -1.2
GINS3-206ENST00000567143 LAMB2P55268 1798 aa7.53□□□□□ -1.2
GINS3-206ENST00000567143 HSPD1P10809 573 aaKnown RBP7.53□□□□□ -1.2
GINS3-206ENST00000567143 IQCB1Q15051 598 aa7.53□□□□□ -1.2
GINS3-206ENST00000567143 PTF1AQ7RTS3 328 aa7.53□□□□□ -1.2
GINS3-206ENST00000567143 MICU3Q86XE3 530 aa7.53□□□□□ -1.2
GINS3-206ENST00000567143 PHKBQ93100 1093 aa7.53□□□□□ -1.2
GINS3-206ENST00000567143 ZFP91Q96JP5 570 aaPredicted RBP7.53□□□□□ -1.2
GINS3-206ENST00000567143 XPO4Q9C0E2 1151 aaKnown RBP7.53□□□□□ -1.2
GINS3-206ENST00000567143 ORC3Q9UBD5 711 aaPredicted RBP7.53□□□□□ -1.2
GINS3-206ENST00000567143 MYH14Q7Z406 1995 aaKnown RBP7.53□□□□□ -1.2
GINS3-206ENST00000567143 USP42Q9H9J4 1324 aaKnown RBP7.52□□□□□ -1.2
GINS3-206ENST00000567143 M0R2C6 588 aa7.52□□□□□ -1.21
GINS3-206ENST00000567143 SNAP23O00161 211 aa7.52□□□□□ -1.21
GINS3-206ENST00000567143 TPM3P06753 285 aa7.52□□□□□ -1.21
GINS3-206ENST00000567143 GPTP24298 496 aa7.52□□□□□ -1.21
GINS3-206ENST00000567143 GTF2F1P35269 517 aaKnown RBP eCLIP7.52□□□□□ -1.21
GINS3-206ENST00000567143 CABP4P57796 275 aa7.52□□□□□ -1.21
GINS3-206ENST00000567143 KRT32Q14532 448 aa7.52□□□□□ -1.21
GINS3-206ENST00000567143 EZH2Q15910 746 aaKnown RBP7.52□□□□□ -1.21
GINS3-206ENST00000567143 CMTR1Q8N1G2 835 aaKnown RBP7.52□□□□□ -1.21
GINS3-206ENST00000567143 PDILTQ8N807 584 aa7.52□□□□□ -1.21
GINS3-206ENST00000567143 OSBP2Q969R2 916 aa7.52□□□□□ -1.21
GINS3-206ENST00000567143 C8orf76Q96K31 380 aa7.52□□□□□ -1.21
GINS3-206ENST00000567143 SLC4A9Q96Q91 983 aa7.52□□□□□ -1.21
GINS3-206ENST00000567143 TMOD3Q9NYL9 352 aa7.52□□□□□ -1.21
GINS3-206ENST00000567143 HMG20BQ9P0W2 317 aa7.52□□□□□ -1.21
GINS3-206ENST00000567143 HDAC5Q9UQL6 1122 aa7.52□□□□□ -1.21
GINS3-206ENST00000567143 ANKRD36CQ5JPF3 1778 aa7.52□□□□□ -1.21
GINS3-206ENST00000567143 MED23Q9ULK4 1368 aa7.52□□□□□ -1.21
GINS3-206ENST00000567143 ELP1O95163 1332 aa7.52□□□□□ -1.21
GINS3-206ENST00000567143 A0A1B0GUL7 405 aa7.52□□□□□ -1.21
GINS3-206ENST00000567143 SMTNL1A8MU46 457 aa7.52□□□□□ -1.21
GINS3-206ENST00000567143 ATP5JP18859 108 aa7.52□□□□□ -1.21
GINS3-206ENST00000567143 PDIA3P30101 505 aaKnown RBP7.52□□□□□ -1.21
GINS3-206ENST00000567143 ADD1P35611 737 aaKnown RBP7.52□□□□□ -1.21
GINS3-206ENST00000567143 SYNE3Q6ZMZ3 975 aa7.52□□□□□ -1.21
GINS3-206ENST00000567143 CLIC6Q96NY7 704 aa7.52□□□□□ -1.21
GINS3-206ENST00000567143 POLR3GO15318 223 aaPredicted RBP7.52□□□□□ -1.21
GINS3-206ENST00000567143 SNW1Q13573 536 aaKnown RBP7.52□□□□□ -1.21
GINS3-206ENST00000567143 SCARF1Q14162 830 aa7.52□□□□□ -1.21
GINS3-206ENST00000567143 SLC15A2Q16348 729 aa7.52□□□□□ -1.21
GINS3-206ENST00000567143 KMT5BQ4FZB7 885 aa7.52□□□□□ -1.21
GINS3-206ENST00000567143 RRP12Q5JTH9 1297 aaKnown RBP7.52□□□□□ -1.21
GINS3-206ENST00000567143 FBXO38Q6PIJ6 1188 aa7.52□□□□□ -1.21
GINS3-206ENST00000567143 DHX40Q8IX18 779 aaKnown RBP7.52□□□□□ -1.21
GINS3-206ENST00000567143 KBTBD3Q8NAB2 608 aa7.52□□□□□ -1.21
GINS3-206ENST00000567143 HELBQ8NG08 1087 aaPredicted RBP7.52□□□□□ -1.21
GINS3-206ENST00000567143 IL17RAQ96F46 866 aa7.52□□□□□ -1.21
GINS3-206ENST00000567143 FAM89AQ96GI7 184 aa7.52□□□□□ -1.21
GINS3-206ENST00000567143 EPB41L2O43491 1005 aaKnown RBP7.51□□□□□ -1.21
GINS3-206ENST00000567143 IDH1O75874 414 aaKnown RBP7.51□□□□□ -1.21
GINS3-206ENST00000567143 FAM160A1Q05DH4 1040 aa7.51□□□□□ -1.21
GINS3-206ENST00000567143 ZNF827Q17R98 1081 aa7.51□□□□□ -1.21
GINS3-206ENST00000567143 NKX2-3Q8TAU0 364 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms