RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 RLBP1P12271 317 aa19.51■□□□□ 0.71
USB1-208ENST00000563207 CHMP4BQ9H444 224 aaKnown RBP19.51■□□□□ 0.71
USB1-208ENST00000563207 RASA3Q14644 834 aa19.5■□□□□ 0.71
USB1-208ENST00000563207 ATG9AQ7Z3C6 839 aa19.5■□□□□ 0.71
USB1-208ENST00000563207 ARMC9Q7Z3E5 817 aa19.5■□□□□ 0.71
USB1-208ENST00000563207 ITPRIPQ8IWB1 547 aa19.5■□□□□ 0.71
USB1-208ENST00000563207 ZNF70Q9UC06 446 aaPredicted RBP19.5■□□□□ 0.71
USB1-208ENST00000563207 FGFR2P21802 821 aa19.49■□□□□ 0.71
USB1-208ENST00000563207 TM4SF4P48230 202 aa19.49■□□□□ 0.71
USB1-208ENST00000563207 RRP1P56182 461 aaKnown RBP19.49■□□□□ 0.71
USB1-208ENST00000563207 MYO1BO43795 1136 aa19.48■□□□□ 0.71
USB1-208ENST00000563207 USP2O75604 605 aaPredicted RBP19.48■□□□□ 0.71
USB1-208ENST00000563207 CRKP46108 304 aa19.48■□□□□ 0.71
USB1-208ENST00000563207 MVPQ14764 893 aaKnown RBP19.48■□□□□ 0.71
USB1-208ENST00000563207 SPDYE2Q495Y8 402 aa19.48■□□□□ 0.71
USB1-208ENST00000563207 SPRYD7Q5W111 196 aa19.48■□□□□ 0.71
USB1-208ENST00000563207 VPS37DQ86XT2 251 aa19.48■□□□□ 0.71
USB1-208ENST00000563207 PANK1Q8TE04 598 aa19.48■□□□□ 0.71
USB1-208ENST00000563207 MEIS3Q99687 375 aa19.48■□□□□ 0.71
USB1-208ENST00000563207 SIL1Q9H173 461 aa19.48■□□□□ 0.71
USB1-208ENST00000563207 OTOFQ9HC10 1997 aa19.48■□□□□ 0.71
USB1-208ENST00000563207 COL1A1P02452 1464 aaPredicted RBP19.48■□□□□ 0.71
USB1-208ENST00000563207 TCP10L2B9ZVM9 353 aa19.47■□□□□ 0.71
USB1-208ENST00000563207 EYA2O00167 538 aa19.47■□□□□ 0.71
USB1-208ENST00000563207 GJA5P36382 358 aa19.47■□□□□ 0.71
USB1-208ENST00000563207 CACNB3P54284 484 aa19.47■□□□□ 0.71
USB1-208ENST00000563207 SERPINA10Q9UK55 444 aa19.47■□□□□ 0.71
USB1-208ENST00000563207 DDX19BQ9UMR2 479 aa19.47■□□□□ 0.71
USB1-208ENST00000563207 ZBTB7BO15156 539 aaPredicted RBP19.46■□□□□ 0.71
USB1-208ENST00000563207 GNAI2P04899 355 aa19.46■□□□□ 0.71
USB1-208ENST00000563207 MAP3K11Q16584 847 aa19.46■□□□□ 0.71
USB1-208ENST00000563207 CAVIN4Q5BKX8 364 aa19.46■□□□□ 0.71
USB1-208ENST00000563207 SLC10A4Q96EP9 437 aa19.46■□□□□ 0.71
USB1-208ENST00000563207 TEPSINQ96N21 525 aa19.46■□□□□ 0.71
USB1-208ENST00000563207 TMEM39BQ9GZU3 492 aa19.46■□□□□ 0.71
USB1-208ENST00000563207 PA2G4Q9UQ80 394 aaKnown RBP19.46■□□□□ 0.71
USB1-208ENST00000563207 LRRFIP2Q9Y608 721 aaKnown RBP19.46■□□□□ 0.71
USB1-208ENST00000563207 FRAT2O75474 233 aaPredicted RBP19.45■□□□□ 0.7
USB1-208ENST00000563207 PUM3Q15397 648 aaKnown RBP19.45■□□□□ 0.7
USB1-208ENST00000563207 REM2Q8IYK8 340 aaPredicted RBP19.45■□□□□ 0.7
USB1-208ENST00000563207 ZNF296Q8WUU4 475 aaPredicted RBP19.45■□□□□ 0.7
USB1-208ENST00000563207 WNK4Q96J92 1243 aa19.45■□□□□ 0.7
USB1-208ENST00000563207 PPP2R3BQ9Y5P8 575 aa19.45■□□□□ 0.7
USB1-208ENST00000563207 MYH13Q9UKX3 1938 aa19.45■□□□□ 0.7
USB1-208ENST00000563207 TNRC18O15417 2968 aaPredicted RBP19.44■□□□□ 0.7
USB1-208ENST00000563207 SUPT20HL1Q3ZLR7 823 aa19.44■□□□□ 0.7
USB1-208ENST00000563207 PPP1R12BO60237 982 aaPredicted RBP19.43■□□□□ 0.7
USB1-208ENST00000563207 CNKSR2Q8WXI2 1034 aa19.43■□□□□ 0.7
USB1-208ENST00000563207 COG6Q9Y2V7 657 aa19.43■□□□□ 0.7
USB1-208ENST00000563207 GPR25O00155 361 aa19.42■□□□□ 0.7
USB1-208ENST00000563207 IGF2BP3O00425 579 aaKnown RBP eCLIP19.42■□□□□ 0.7
USB1-208ENST00000563207 IFIT1P09914 478 aaKnown RBP19.42■□□□□ 0.7
USB1-208ENST00000563207 CTU1Q7Z7A3 348 aaKnown RBP19.42■□□□□ 0.7
USB1-208ENST00000563207 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.42■□□□□ 0.7
USB1-208ENST00000563207 LAMB1P07942 1786 aa19.42■□□□□ 0.7
USB1-208ENST00000563207 ADORA1P30542 326 aa19.41■□□□□ 0.7
USB1-208ENST00000563207 RGS19P49795 217 aa19.41■□□□□ 0.7
USB1-208ENST00000563207 MTX1Q13505 466 aa19.41■□□□□ 0.7
USB1-208ENST00000563207 C20orf194Q5TEA3 1177 aa19.41■□□□□ 0.7
USB1-208ENST00000563207 APOBEC3HQ6NTF7 200 aaKnown RBP19.41■□□□□ 0.7
USB1-208ENST00000563207 LPIN2Q92539 896 aa19.41■□□□□ 0.7
USB1-208ENST00000563207 ELP3Q9H9T3 547 aa19.41■□□□□ 0.7
USB1-208ENST00000563207 SLC5A1P13866 664 aa19.4■□□□□ 0.7
USB1-208ENST00000563207 SREBF2Q12772 1141 aa19.4■□□□□ 0.7
USB1-208ENST00000563207 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.4■□□□□ 0.7
USB1-208ENST00000563207 IFNL1Q8IU54 200 aa19.4■□□□□ 0.7
USB1-208ENST00000563207 TBC1D22AQ8WUA7 517 aa19.4■□□□□ 0.7
USB1-208ENST00000563207 TEKT1Q969V4 418 aa19.4■□□□□ 0.7
USB1-208ENST00000563207 PTPN18Q99952 460 aa19.4■□□□□ 0.7
USB1-208ENST00000563207 SUPT16HQ9Y5B9 1047 aaKnown RBP19.4■□□□□ 0.7
USB1-208ENST00000563207 IREB2P48200 963 aaKnown RBP19.39■□□□□ 0.69
USB1-208ENST00000563207 SOX10P56693 466 aa19.39■□□□□ 0.69
USB1-208ENST00000563207 ZBTB40Q9NUA8 1239 aa19.39■□□□□ 0.69
USB1-208ENST00000563207 PHKA1P46020 1223 aa19.38■□□□□ 0.69
USB1-208ENST00000563207 HDLBPQ00341 1268 aaKnown RBP19.38■□□□□ 0.69
USB1-208ENST00000563207 DIXDC1Q155Q3 683 aa19.38■□□□□ 0.69
USB1-208ENST00000563207 ATP2B3Q16720 1220 aa19.38■□□□□ 0.69
USB1-208ENST00000563207 ANKRD13AQ8IZ07 590 aa19.38■□□□□ 0.69
USB1-208ENST00000563207 ZDHHC15Q96MV8 337 aa19.38■□□□□ 0.69
USB1-208ENST00000563207 CEP126Q9P2H0 1117 aa19.38■□□□□ 0.69
USB1-208ENST00000563207 FBXO3Q9UK99 471 aa19.38■□□□□ 0.69
USB1-208ENST00000563207 MANSC4A6NHS7 340 aaPredicted RBP19.37■□□□□ 0.69
USB1-208ENST00000563207 CIAO1O76071 339 aa19.37■□□□□ 0.69
USB1-208ENST00000563207 CENPBP07199 599 aaPredicted RBP19.37■□□□□ 0.69
USB1-208ENST00000563207 ZBTB48P10074 688 aaPredicted RBP19.37■□□□□ 0.69
USB1-208ENST00000563207 PRDX5P30044 214 aa19.37■□□□□ 0.69
USB1-208ENST00000563207 TIMM10P62072 90 aa19.37■□□□□ 0.69
USB1-208ENST00000563207 MLLT1Q03111 559 aaPredicted RBP19.37■□□□□ 0.69
USB1-208ENST00000563207 AAMPQ13685 434 aa19.37■□□□□ 0.69
USB1-208ENST00000563207 TNFAIP1Q13829 316 aa19.37■□□□□ 0.69
USB1-208ENST00000563207 VGLL4Q14135 290 aa19.37■□□□□ 0.69
USB1-208ENST00000563207 OPTNQ96CV9 577 aa19.37■□□□□ 0.69
USB1-208ENST00000563207 CAP1Q01518 475 aa19.36■□□□□ 0.69
USB1-208ENST00000563207 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.36■□□□□ 0.69
USB1-208ENST00000563207 COPRSQ9NQ92 184 aa19.36■□□□□ 0.69
USB1-208ENST00000563207 HPS5Q9UPZ3 1129 aa19.36■□□□□ 0.69
USB1-208ENST00000563207 HTTP42858 3142 aa19.35■□□□□ 0.69
USB1-208ENST00000563207 SRGAP3O43295 1099 aa19.35■□□□□ 0.69
USB1-208ENST00000563207 FKTNO75072 461 aa19.35■□□□□ 0.69
USB1-208ENST00000563207 ATP8B2P98198 1209 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms