RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 TIAM2Q8IVF5 1701 aa11.54□□□□□ -0.56
SMG1-205ENST00000561947 ZNF804BA4D1E1 1349 aa11.54□□□□□ -0.56
SMG1-205ENST00000561947 TRDNQ13061 729 aa11.53□□□□□ -0.56
SMG1-205ENST00000561947 SMIM5Q71RC9 77 aa11.53□□□□□ -0.56
SMG1-205ENST00000561947 KLHL34Q8N239 644 aa11.53□□□□□ -0.56
SMG1-205ENST00000561947 TRIM44Q96DX7 344 aaPredicted RBP11.53□□□□□ -0.56
SMG1-205ENST00000561947 SPATA32Q96LK8 384 aa11.53□□□□□ -0.56
SMG1-205ENST00000561947 BSDC1Q9NW68 430 aaPredicted RBP11.53□□□□□ -0.56
SMG1-205ENST00000561947 CCNL1Q9UK58 526 aaPredicted RBP11.53□□□□□ -0.56
SMG1-205ENST00000561947 KLF18A0A0U1RQI7 1052 aa11.53□□□□□ -0.56
SMG1-205ENST00000561947 PATL2C9JE40 543 aaKnown RBP11.53□□□□□ -0.56
SMG1-205ENST00000561947 GNPATO15228 680 aa11.53□□□□□ -0.56
SMG1-205ENST00000561947 MBD4O95243 580 aa11.53□□□□□ -0.56
SMG1-205ENST00000561947 GTF2E1P29083 439 aaPredicted RBP11.53□□□□□ -0.56
SMG1-205ENST00000561947 LEO1Q8WVC0 666 aaPredicted RBP11.53□□□□□ -0.56
SMG1-205ENST00000561947 RRAGDQ9NQL2 400 aaPredicted RBP11.53□□□□□ -0.56
SMG1-205ENST00000561947 TFIP11Q9UBB9 837 aaKnown RBP11.53□□□□□ -0.56
SMG1-205ENST00000561947 SRP68Q9UHB9 627 aaKnown RBP11.53□□□□□ -0.56
SMG1-205ENST00000561947 CARMIL3Q8ND23 1372 aa11.53□□□□□ -0.56
SMG1-205ENST00000561947 UBE4AQ14139 1066 aa11.53□□□□□ -0.56
SMG1-205ENST00000561947 GOLGA8BA8MQT2 603 aa11.52□□□□□ -0.57
SMG1-205ENST00000561947 ZPR1O75312 459 aa11.52□□□□□ -0.57
SMG1-205ENST00000561947 IFNL3Q8IZI9 196 aa11.52□□□□□ -0.57
SMG1-205ENST00000561947 SETDB2Q96T68 719 aa11.52□□□□□ -0.57
SMG1-205ENST00000561947 ARMT1Q9H993 441 aa11.52□□□□□ -0.57
SMG1-205ENST00000561947 EPB41L4AQ9HCS5 686 aaPredicted RBP11.52□□□□□ -0.57
SMG1-205ENST00000561947 HPS5Q9UPZ3 1129 aa11.52□□□□□ -0.57
SMG1-205ENST00000561947 PNPLA7Q6ZV29 1317 aa11.52□□□□□ -0.57
SMG1-205ENST00000561947 DHX16O60231 1041 aaKnown RBP11.52□□□□□ -0.57
SMG1-205ENST00000561947 FOSBP53539 338 aa11.52□□□□□ -0.57
SMG1-205ENST00000561947 FAM182BQ5T319 152 aa11.52□□□□□ -0.57
SMG1-205ENST00000561947 RNF214Q8ND24 703 aa11.52□□□□□ -0.57
SMG1-205ENST00000561947 CELF1Q92879 486 aaKnown RBP11.52□□□□□ -0.57
SMG1-205ENST00000561947 PDLIM2Q96JY6 352 aa11.52□□□□□ -0.57
SMG1-205ENST00000561947 NAPBQ9H115 298 aa11.52□□□□□ -0.57
SMG1-205ENST00000561947 GNL3LQ9NVN8 582 aaKnown RBP11.52□□□□□ -0.57
SMG1-205ENST00000561947 DENND2AQ9ULE3 1009 aa11.52□□□□□ -0.57
SMG1-205ENST00000561947 MINPP1Q9UNW1 487 aa11.52□□□□□ -0.57
SMG1-205ENST00000561947 RTCBQ9Y3I0 505 aaKnown RBP11.52□□□□□ -0.57
SMG1-205ENST00000561947 FDPSP14324 419 aaKnown RBP11.51□□□□□ -0.57
SMG1-205ENST00000561947 GNAT2P19087 354 aa11.51□□□□□ -0.57
SMG1-205ENST00000561947 CYB5R4Q7L1T6 521 aa11.51□□□□□ -0.57
SMG1-205ENST00000561947 NBPF5PQ86XG9 351 aaPredicted RBP11.51□□□□□ -0.57
SMG1-205ENST00000561947 GJD4Q96KN9 370 aaPredicted RBP11.51□□□□□ -0.57
SMG1-205ENST00000561947 LRP2BPQ9P2M1 347 aa11.51□□□□□ -0.57
SMG1-205ENST00000561947 ANGEL1Q9UNK9 670 aaKnown RBP11.51□□□□□ -0.57
SMG1-205ENST00000561947 MYH13Q9UKX3 1938 aa11.51□□□□□ -0.57
SMG1-205ENST00000561947 COL1A1P02452 1464 aaPredicted RBP11.51□□□□□ -0.57
SMG1-205ENST00000561947 GSG1L2A8MUP6 293 aa11.51□□□□□ -0.57
SMG1-205ENST00000561947 SH2B2O14492 632 aaPredicted RBP11.51□□□□□ -0.57
SMG1-205ENST00000561947 GYG1P46976 350 aa11.51□□□□□ -0.57
SMG1-205ENST00000561947 LCORLQ8N3X6 602 aa11.51□□□□□ -0.57
SMG1-205ENST00000561947 NLRP3Q96P20 1036 aa11.51□□□□□ -0.57
SMG1-205ENST00000561947 CFAP45Q9UL16 551 aa11.51□□□□□ -0.57
SMG1-205ENST00000561947 NEDD4P46934 1319 aa11.5□□□□□ -0.57
SMG1-205ENST00000561947 B4E1Z4 1266 aa11.5□□□□□ -0.57
SMG1-205ENST00000561947 MEX3CQ5U5Q3 659 aaKnown RBP11.5□□□□□ -0.57
SMG1-205ENST00000561947 NKX2-3Q8TAU0 364 aa11.5□□□□□ -0.57
SMG1-205ENST00000561947 IQSEC3Q9UPP2 1182 aaPredicted RBP11.5□□□□□ -0.57
SMG1-205ENST00000561947 CACNA1SQ13698 1873 aa11.5□□□□□ -0.57
SMG1-205ENST00000561947 GOLGA6L4A6NEF3 574 aa11.5□□□□□ -0.57
SMG1-205ENST00000561947 LIG1P18858 919 aa11.5□□□□□ -0.57
SMG1-205ENST00000561947 ADD1P35611 737 aaKnown RBP11.5□□□□□ -0.57
SMG1-205ENST00000561947 TMEM87BQ96K49 555 aa11.5□□□□□ -0.57
SMG1-205ENST00000561947 FUCA2Q9BTY2 467 aa11.5□□□□□ -0.57
SMG1-205ENST00000561947 NACAP1Q9BZK3 213 aa11.5□□□□□ -0.57
SMG1-205ENST00000561947 PRKAB2O43741 272 aa11.49□□□□□ -0.57
SMG1-205ENST00000561947 PPFIA3O75145 1194 aa11.49□□□□□ -0.57
SMG1-205ENST00000561947 RPS8P62241 208 aaKnown RBP11.49□□□□□ -0.57
SMG1-205ENST00000561947 CAVIN4Q5BKX8 364 aa11.49□□□□□ -0.57
SMG1-205ENST00000561947 GIMAP6Q6P9H5 292 aa11.49□□□□□ -0.57
SMG1-205ENST00000561947 TPTE2Q6XPS3 522 aa11.49□□□□□ -0.57
SMG1-205ENST00000561947 AMIGO3Q86WK7 504 aa11.49□□□□□ -0.57
SMG1-205ENST00000561947 ARHGEF1Q92888 912 aaKnown RBP11.49□□□□□ -0.57
SMG1-205ENST00000561947 SLC4A4Q9Y6R1 1079 aa11.49□□□□□ -0.57
SMG1-205ENST00000561947 TNRC6CQ9HCJ0 1690 aaKnown RBP11.49□□□□□ -0.57
SMG1-205ENST00000561947 WTIPA6NIX2 430 aaPredicted RBP11.49□□□□□ -0.57
SMG1-205ENST00000561947 ESPNB1AK53 854 aa11.49□□□□□ -0.57
SMG1-205ENST00000561947 CPLX1O14810 134 aa11.49□□□□□ -0.57
SMG1-205ENST00000561947 CYP7A1P22680 504 aa11.49□□□□□ -0.57
SMG1-205ENST00000561947 GUCY1B3Q02153 619 aa11.49□□□□□ -0.57
SMG1-205ENST00000561947 CTDSPL2Q05D32 466 aa11.49□□□□□ -0.57
SMG1-205ENST00000561947 UVSSAQ2YD98 709 aa11.49□□□□□ -0.57
SMG1-205ENST00000561947 ATL3Q6DD88 541 aa11.49□□□□□ -0.57
SMG1-205ENST00000561947 RAB11FIP4Q86YS3 637 aa11.49□□□□□ -0.57
SMG1-205ENST00000561947 PGBD1Q96JS3 809 aa11.49□□□□□ -0.57
SMG1-205ENST00000561947 FAM84BQ96KN1 310 aaPredicted RBP11.49□□□□□ -0.57
SMG1-205ENST00000561947 ECM29Q5VYK3 1845 aa11.48□□□□□ -0.57
SMG1-205ENST00000561947 AFF2P51816 1311 aa11.48□□□□□ -0.57
SMG1-205ENST00000561947 TDO2P48775 406 aa11.48□□□□□ -0.57
SMG1-205ENST00000561947 AKNAD1Q5T1N1 836 aa11.48□□□□□ -0.57
SMG1-205ENST00000561947 MIGA1Q8NAN2 632 aa11.48□□□□□ -0.57
SMG1-205ENST00000561947 ZNF396Q96N95 335 aaPredicted RBP11.48□□□□□ -0.57
SMG1-205ENST00000561947 NUP62CLQ9H1M0 184 aa11.48□□□□□ -0.57
SMG1-205ENST00000561947 CNNM2Q9H8M5 875 aa11.48□□□□□ -0.57
SMG1-205ENST00000561947 ORC3Q9UBD5 711 aaPredicted RBP11.48□□□□□ -0.57
SMG1-205ENST00000561947 ABCF2Q9UG63 623 aa11.48□□□□□ -0.57
SMG1-205ENST00000561947 VPS37DQ86XT2 251 aa11.48□□□□□ -0.57
SMG1-205ENST00000561947 IGDCC4Q8TDY8 1250 aa11.48□□□□□ -0.57
SMG1-205ENST00000561947 STAG1Q8WVM7 1258 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms