RNA–Protein interactions for RNA: ENST00000560615.5

TPM1-224, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-224ENST00000560615 FZD1Q9UP38 647 aa23.19■■□□□ 1.3
TPM1-224ENST00000560615 HPS5Q9UPZ3 1129 aa23.19■■□□□ 1.3
TPM1-224ENST00000560615 USP2O75604 605 aaPredicted RBP23.18■■□□□ 1.3
TPM1-224ENST00000560615 CT47B1P0C2W7 299 aaPredicted RBP23.18■■□□□ 1.3
TPM1-224ENST00000560615 PUM3Q15397 648 aaKnown RBP23.18■■□□□ 1.3
TPM1-224ENST00000560615 FBXO46Q6PJ61 603 aaPredicted RBP23.18■■□□□ 1.3
TPM1-224ENST00000560615 TEKT1Q969V4 418 aa23.18■■□□□ 1.3
TPM1-224ENST00000560615 HOOK2Q96ED9 719 aa23.18■■□□□ 1.3
TPM1-224ENST00000560615 CLMNQ96JQ2 1002 aa23.18■■□□□ 1.3
TPM1-224ENST00000560615 SUGT1Q9Y2Z0 365 aa23.18■■□□□ 1.3
TPM1-224ENST00000560615 KIF16BQ96L93 1317 aa23.17■■□□□ 1.3
TPM1-224ENST00000560615 SOX10P56693 466 aa23.17■■□□□ 1.3
TPM1-224ENST00000560615 MRIQ9BWK5 157 aa23.17■■□□□ 1.3
TPM1-224ENST00000560615 IQSEC3Q9UPP2 1182 aaPredicted RBP23.17■■□□□ 1.3
TPM1-224ENST00000560615 TCP10L2B9ZVM9 353 aa23.16■■□□□ 1.3
TPM1-224ENST00000560615 A0A1B0GUL6 1792 aa23.15■■□□□ 1.3
TPM1-224ENST00000560615 SLC5A1P13866 664 aa23.15■■□□□ 1.3
TPM1-224ENST00000560615 VGLL2Q8N8G2 317 aa23.15■■□□□ 1.3
TPM1-224ENST00000560615 FBXO3Q9UK99 471 aa23.15■■□□□ 1.3
TPM1-224ENST00000560615 CSADQ9Y600 493 aa23.15■■□□□ 1.3
TPM1-224ENST00000560615 SSC5DA1L4H1 1573 aa23.14■■□□□ 1.3
TPM1-224ENST00000560615 EYA2O00167 538 aa23.14■■□□□ 1.29
TPM1-224ENST00000560615 UBTFL1P0CB47 393 aaPredicted RBP23.14■■□□□ 1.29
TPM1-224ENST00000560615 BCAMP50895 628 aa23.14■■□□□ 1.29
TPM1-224ENST00000560615 LPIN2Q92539 896 aa23.14■■□□□ 1.29
TPM1-224ENST00000560615 WDHD1O75717 1129 aaPredicted RBP23.13■■□□□ 1.29
TPM1-224ENST00000560615 MAP3K9P80192 1104 aa23.13■■□□□ 1.29
TPM1-224ENST00000560615 KLHDC4Q8TBB5 520 aa23.13■■□□□ 1.29
TPM1-224ENST00000560615 WDR66Q8TBY9 1149 aa23.13■■□□□ 1.29
TPM1-224ENST00000560615 ERO1AQ96HE7 468 aa23.13■■□□□ 1.29
TPM1-224ENST00000560615 API5Q9BZZ5 524 aaKnown RBP23.13■■□□□ 1.29
TPM1-224ENST00000560615 AOX1Q06278 1338 aa23.12■■□□□ 1.29
TPM1-224ENST00000560615 OPTNQ96CV9 577 aa23.12■■□□□ 1.29
TPM1-224ENST00000560615 ZDHHC15Q96MV8 337 aa23.12■■□□□ 1.29
TPM1-224ENST00000560615 ELP3Q9H9T3 547 aa23.12■■□□□ 1.29
TPM1-224ENST00000560615 GNL3LQ9NVN8 582 aaKnown RBP23.12■■□□□ 1.29
TPM1-224ENST00000560615 ECM29Q5VYK3 1845 aa23.12■■□□□ 1.29
TPM1-224ENST00000560615 IGF2BP3O00425 579 aaKnown RBP eCLIP23.11■■□□□ 1.29
TPM1-224ENST00000560615 ARHGEF6Q15052 776 aa23.11■■□□□ 1.29
TPM1-224ENST00000560615 TMEM39BQ9GZU3 492 aa23.11■■□□□ 1.29
TPM1-224ENST00000560615 TESPA1A2RU30 521 aaPredicted RBP23.1■■□□□ 1.29
TPM1-224ENST00000560615 FGFR2P21802 821 aa23.1■■□□□ 1.29
TPM1-224ENST00000560615 GTF2A2P52657 109 aa23.1■■□□□ 1.29
TPM1-224ENST00000560615 FKBP1CQ5VVH2 108 aa23.1■■□□□ 1.29
TPM1-224ENST00000560615 HHIPL2Q6UWX4 724 aa23.1■■□□□ 1.29
TPM1-224ENST00000560615 FAM83AQ86UY5 434 aa23.1■■□□□ 1.29
TPM1-224ENST00000560615 TEPSINQ96N21 525 aa23.1■■□□□ 1.29
TPM1-224ENST00000560615 CEP126Q9P2H0 1117 aa23.1■■□□□ 1.29
TPM1-224ENST00000560615 TRIM17Q9Y577 477 aa23.1■■□□□ 1.29
TPM1-224ENST00000560615 DCAF15Q66K64 600 aa23.09■■□□□ 1.29
TPM1-224ENST00000560615 CDCA7LQ96GN5 454 aa23.09■■□□□ 1.29
TPM1-224ENST00000560615 R3HDMLQ9H3Y0 253 aa23.09■■□□□ 1.29
TPM1-224ENST00000560615 CIAO1O76071 339 aa23.08■■□□□ 1.29
TPM1-224ENST00000560615 RFX5P48382 616 aaPredicted RBP23.08■■□□□ 1.29
TPM1-224ENST00000560615 CRHR2Q13324 411 aa23.07■■□□□ 1.28
TPM1-224ENST00000560615 VGLL4Q14135 290 aa23.07■■□□□ 1.28
TPM1-224ENST00000560615 GRIK5Q16478 980 aa23.07■■□□□ 1.28
TPM1-224ENST00000560615 INTS3Q68E01 1043 aaKnown RBP23.07■■□□□ 1.28
TPM1-224ENST00000560615 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.07■■□□□ 1.28
TPM1-224ENST00000560615 TRMT2AQ8IZ69 625 aaKnown RBP23.07■■□□□ 1.28
TPM1-224ENST00000560615 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.07■■□□□ 1.28
TPM1-224ENST00000560615 NOB1Q9ULX3 412 aaKnown RBP23.07■■□□□ 1.28
TPM1-224ENST00000560615 GJA5P36382 358 aa23.06■■□□□ 1.28
TPM1-224ENST00000560615 SP3Q02447 781 aa23.06■■□□□ 1.28
TPM1-224ENST00000560615 ATP2B3Q16720 1220 aa23.06■■□□□ 1.28
TPM1-224ENST00000560615 ZFYVE28Q9HCC9 887 aa23.06■■□□□ 1.28
TPM1-224ENST00000560615 CCL15-CCL14A0A0B4J2E2 113 aa23.05■■□□□ 1.28
TPM1-224ENST00000560615 IL15P40933 162 aaPredicted RBP23.05■■□□□ 1.28
TPM1-224ENST00000560615 CCL15Q16663 113 aa23.05■■□□□ 1.28
TPM1-224ENST00000560615 APOBEC3HQ6NTF7 200 aaKnown RBP23.05■■□□□ 1.28
TPM1-224ENST00000560615 OTOP1Q7RTM1 612 aa23.05■■□□□ 1.28
TPM1-224ENST00000560615 SIL1Q9H173 461 aa23.05■■□□□ 1.28
TPM1-224ENST00000560615 CCER2I3L3R5 266 aa23.04■■□□□ 1.28
TPM1-224ENST00000560615 SEMA3EO15041 775 aa23.04■■□□□ 1.28
TPM1-224ENST00000560615 CACNB3P54284 484 aa23.04■■□□□ 1.28
TPM1-224ENST00000560615 ATG9AQ7Z3C6 839 aa23.04■■□□□ 1.28
TPM1-224ENST00000560615 ERO1BQ86YB8 467 aa23.04■■□□□ 1.28
TPM1-224ENST00000560615 OTUD5Q96G74 571 aa23.04■■□□□ 1.28
TPM1-224ENST00000560615 MS4A4AQ96JQ5 239 aa23.04■■□□□ 1.28
TPM1-224ENST00000560615 WRNIP1Q96S55 665 aa23.04■■□□□ 1.28
TPM1-224ENST00000560615 PTPN18Q99952 460 aa23.04■■□□□ 1.28
TPM1-224ENST00000560615 EFCC1Q9HA90 598 aa23.04■■□□□ 1.28
TPM1-224ENST00000560615 DENND2AQ9ULE3 1009 aa23.04■■□□□ 1.28
TPM1-224ENST00000560615 ARAP2Q8WZ64 1704 aa23.03■■□□□ 1.28
TPM1-224ENST00000560615 SPDYE5A6NIY4 337 aa23.03■■□□□ 1.28
TPM1-224ENST00000560615 LDHBP07195 334 aaKnown RBP23.03■■□□□ 1.28
TPM1-224ENST00000560615 CETPP11597 493 aa23.03■■□□□ 1.28
TPM1-224ENST00000560615 TAF1CQ15572 869 aaPredicted RBP23.03■■□□□ 1.28
TPM1-224ENST00000560615 ZGPATQ8N5A5 531 aaKnown RBP23.03■■□□□ 1.28
TPM1-224ENST00000560615 ZNF341Q9BYN7 854 aa23.03■■□□□ 1.28
TPM1-224ENST00000560615 CDAN1Q8IWY9 1227 aa23.02■■□□□ 1.28
TPM1-224ENST00000560615 CD99L2Q8TCZ2 262 aa23.02■■□□□ 1.28
TPM1-224ENST00000560615 FAM151AQ8WW52 585 aa23.02■■□□□ 1.28
TPM1-224ENST00000560615 ZCCHC17Q9NP64 241 aaKnown RBP23.02■■□□□ 1.28
TPM1-224ENST00000560615 PTPN22Q9Y2R2 807 aa23.02■■□□□ 1.28
TPM1-224ENST00000560615 RPAP1Q9BWH6 1393 aaPredicted RBP23.01■■□□□ 1.27
TPM1-224ENST00000560615 GNAI3P08754 354 aa23.01■■□□□ 1.27
TPM1-224ENST00000560615 SNAPC2Q13487 334 aa23.01■■□□□ 1.27
TPM1-224ENST00000560615 BRI3BPQ8WY22 251 aa23.01■■□□□ 1.27
TPM1-224ENST00000560615 ARHGAP45Q92619 1136 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms