RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 NEDD4P46934 1319 aa12.42□□□□□ -0.42
TPM1-210ENST00000558264 CKAP2LQ8IYA6 745 aa12.41□□□□□ -0.42
TPM1-210ENST00000558264 LCORLQ8N3X6 602 aa12.41□□□□□ -0.42
TPM1-210ENST00000558264 PGBD1Q96JS3 809 aa12.41□□□□□ -0.42
TPM1-210ENST00000558264 MYL10Q9BUA6 226 aa12.41□□□□□ -0.42
TPM1-210ENST00000558264 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.41□□□□□ -0.42
TPM1-210ENST00000558264 LRP2BPQ9P2M1 347 aa12.41□□□□□ -0.42
TPM1-210ENST00000558264 PLCB2Q00722 1185 aa12.41□□□□□ -0.42
TPM1-210ENST00000558264 MAP3K12Q12852 859 aa12.41□□□□□ -0.42
TPM1-210ENST00000558264 TRDNQ13061 729 aa12.41□□□□□ -0.42
TPM1-210ENST00000558264 TICAM2Q86XR7 235 aa12.41□□□□□ -0.42
TPM1-210ENST00000558264 BICD2Q8TD16 824 aa12.41□□□□□ -0.42
TPM1-210ENST00000558264 ZNF274Q96GC6 653 aaPredicted RBP12.41□□□□□ -0.42
TPM1-210ENST00000558264 LLPHQ9BRT6 129 aaKnown RBP12.41□□□□□ -0.42
TPM1-210ENST00000558264 DACT1Q9NYF0 836 aa12.41□□□□□ -0.42
TPM1-210ENST00000558264 HPS5Q9UPZ3 1129 aa12.41□□□□□ -0.42
TPM1-210ENST00000558264 SMIM22K7EJ46 135 aa12.4□□□□□ -0.42
TPM1-210ENST00000558264 KLRK1P26718 216 aa12.4□□□□□ -0.42
TPM1-210ENST00000558264 RRP12Q5JTH9 1297 aaKnown RBP12.4□□□□□ -0.42
TPM1-210ENST00000558264 ANKRD18AQ8IVF6 992 aa12.4□□□□□ -0.42
TPM1-210ENST00000558264 TOMM22Q9NS69 142 aa12.4□□□□□ -0.42
TPM1-210ENST00000558264 USP25Q9UHP3 1055 aa12.4□□□□□ -0.42
TPM1-210ENST00000558264 TACC3Q9Y6A5 838 aa12.4□□□□□ -0.42
TPM1-210ENST00000558264 CARMIL3Q8ND23 1372 aa12.4□□□□□ -0.42
TPM1-210ENST00000558264 ADGRA1Q86SQ6 560 aa12.4□□□□□ -0.42
TPM1-210ENST00000558264 CDC5LQ99459 802 aaKnown RBP12.4□□□□□ -0.42
TPM1-210ENST00000558264 SCAND2PQ9GZW5 306 aaPredicted RBP12.4□□□□□ -0.42
TPM1-210ENST00000558264 NAPBQ9H115 298 aa12.4□□□□□ -0.42
TPM1-210ENST00000558264 SALL1Q9NSC2 1324 aa12.4□□□□□ -0.42
TPM1-210ENST00000558264 CCNL1Q9UK58 526 aaPredicted RBP12.4□□□□□ -0.42
TPM1-210ENST00000558264 JAG2Q9Y219 1238 aa12.4□□□□□ -0.42
TPM1-210ENST00000558264 HMGN5P82970 282 aaKnown RBP12.39□□□□□ -0.43
TPM1-210ENST00000558264 MICU3Q86XE3 530 aa12.39□□□□□ -0.43
TPM1-210ENST00000558264 IFNL3Q8IZI9 196 aa12.39□□□□□ -0.43
TPM1-210ENST00000558264 AIFM3Q96NN9 605 aa12.39□□□□□ -0.43
TPM1-210ENST00000558264 ZKSCAN3Q9BRR0 538 aa12.39□□□□□ -0.43
TPM1-210ENST00000558264 CPLX1O14810 134 aa12.39□□□□□ -0.43
TPM1-210ENST00000558264 NR1I2O75469 434 aa12.39□□□□□ -0.43
TPM1-210ENST00000558264 ADD1P35611 737 aaKnown RBP12.39□□□□□ -0.43
TPM1-210ENST00000558264 USP28Q96RU2 1077 aa12.39□□□□□ -0.43
TPM1-210ENST00000558264 SLC4A4Q9Y6R1 1079 aa12.39□□□□□ -0.43
TPM1-210ENST00000558264 ATRNO75882 1429 aa12.38□□□□□ -0.43
TPM1-210ENST00000558264 POLR3DP05423 398 aaPredicted RBP12.38□□□□□ -0.43
TPM1-210ENST00000558264 TDO2P48775 406 aa12.38□□□□□ -0.43
TPM1-210ENST00000558264 ILDR1Q86SU0 546 aaPredicted RBP12.38□□□□□ -0.43
TPM1-210ENST00000558264 SDR42E1Q8WUS8 393 aa12.38□□□□□ -0.43
TPM1-210ENST00000558264 NUP62CLQ9H1M0 184 aa12.38□□□□□ -0.43
TPM1-210ENST00000558264 RAI14Q9P0K7 980 aa12.38□□□□□ -0.43
TPM1-210ENST00000558264 ORC3Q9UBD5 711 aaPredicted RBP12.38□□□□□ -0.43
TPM1-210ENST00000558264 COL5A3P25940 1745 aaPredicted RBP12.38□□□□□ -0.43
TPM1-210ENST00000558264 RREB1Q92766 1687 aa12.38□□□□□ -0.43
TPM1-210ENST00000558264 ELP1O95163 1332 aa12.38□□□□□ -0.43
TPM1-210ENST00000558264 UBE2Q2LH0YL09 131 aa12.38□□□□□ -0.43
TPM1-210ENST00000558264 NPHP1O15259 732 aa12.38□□□□□ -0.43
TPM1-210ENST00000558264 CYP7A1P22680 504 aa12.38□□□□□ -0.43
TPM1-210ENST00000558264 CLEC4GQ6UXB4 293 aa12.38□□□□□ -0.43
TPM1-210ENST00000558264 NBPF5PQ86XG9 351 aaPredicted RBP12.38□□□□□ -0.43
TPM1-210ENST00000558264 PDLIM2Q96JY6 352 aa12.38□□□□□ -0.43
TPM1-210ENST00000558264 TFCP2L1Q9NZI6 479 aa12.38□□□□□ -0.43
TPM1-210ENST00000558264 MINPP1Q9UNW1 487 aa12.38□□□□□ -0.43
TPM1-210ENST00000558264 GSG1L2A8MUP6 293 aa12.37□□□□□ -0.43
TPM1-210ENST00000558264 ZPR1O75312 459 aa12.37□□□□□ -0.43
TPM1-210ENST00000558264 MEX3CQ5U5Q3 659 aaKnown RBP12.37□□□□□ -0.43
TPM1-210ENST00000558264 NFXL1Q6ZNB6 911 aa12.37□□□□□ -0.43
TPM1-210ENST00000558264 VPS37DQ86XT2 251 aa12.37□□□□□ -0.43
TPM1-210ENST00000558264 PHKBQ93100 1093 aa12.37□□□□□ -0.43
TPM1-210ENST00000558264 SETDB2Q96T68 719 aa12.37□□□□□ -0.43
TPM1-210ENST00000558264 ZSCAN16Q9H4T2 348 aaPredicted RBP12.37□□□□□ -0.43
TPM1-210ENST00000558264 PATL2C9JE40 543 aaKnown RBP12.37□□□□□ -0.43
TPM1-210ENST00000558264 NAA16Q6N069 864 aaPredicted RBP12.37□□□□□ -0.43
TPM1-210ENST00000558264 FUCA2Q9BTY2 467 aa12.37□□□□□ -0.43
TPM1-210ENST00000558264 TNMDQ9H2S6 317 aa12.37□□□□□ -0.43
TPM1-210ENST00000558264 ANGEL1Q9UNK9 670 aaKnown RBP12.37□□□□□ -0.43
TPM1-210ENST00000558264 COL1A1P02452 1464 aaPredicted RBP12.36□□□□□ -0.43
TPM1-210ENST00000558264 SH2B2O14492 632 aaPredicted RBP12.36□□□□□ -0.43
TPM1-210ENST00000558264 PDIA4P13667 645 aaKnown RBP12.36□□□□□ -0.43
TPM1-210ENST00000558264 CDC27P30260 824 aa12.36□□□□□ -0.43
TPM1-210ENST00000558264 FNBP4Q8N3X1 1017 aaPredicted RBP12.36□□□□□ -0.43
TPM1-210ENST00000558264 C8orf76Q96K31 380 aa12.36□□□□□ -0.43
TPM1-210ENST00000558264 ZSWIM5Q9P217 1185 aa12.36□□□□□ -0.43
TPM1-210ENST00000558264 CNTNAP4Q9C0A0 1308 aa12.36□□□□□ -0.43
TPM1-210ENST00000558264 CLCN1P35523 988 aa12.36□□□□□ -0.43
TPM1-210ENST00000558264 METAP2P50579 478 aaKnown RBP eCLIP12.36□□□□□ -0.43
TPM1-210ENST00000558264 EVCP57679 992 aa12.36□□□□□ -0.43
TPM1-210ENST00000558264 TMEM67Q5HYA8 995 aa12.36□□□□□ -0.43
TPM1-210ENST00000558264 ARHGEF1Q92888 912 aaKnown RBP12.36□□□□□ -0.43
TPM1-210ENST00000558264 KIF3AQ9Y496 699 aa12.36□□□□□ -0.43
TPM1-210ENST00000558264 ARAP2Q8WZ64 1704 aa12.36□□□□□ -0.43
TPM1-210ENST00000558264 RTL9Q8NET4 1388 aa12.36□□□□□ -0.43
TPM1-210ENST00000558264 A0A087WWV3 80 aa12.35□□□□□ -0.43
TPM1-210ENST00000558264 MINDY4BA8MYZ0 360 aa12.35□□□□□ -0.43
TPM1-210ENST00000558264 LETM1O95202 739 aaPredicted RBP12.35□□□□□ -0.43
TPM1-210ENST00000558264 PTMAP06454 111 aaKnown RBP12.35□□□□□ -0.43
TPM1-210ENST00000558264 DYNLL1P63167 89 aaKnown RBP12.35□□□□□ -0.43
TPM1-210ENST00000558264 MAP3K11Q16584 847 aa12.35□□□□□ -0.43
TPM1-210ENST00000558264 APOA5Q6Q788 366 aa12.35□□□□□ -0.43
TPM1-210ENST00000558264 CCDC82Q8N4S0 544 aa12.35□□□□□ -0.43
TPM1-210ENST00000558264 NARFQ9UHQ1 456 aa12.35□□□□□ -0.43
TPM1-210ENST00000558264 RTCBQ9Y3I0 505 aaKnown RBP12.35□□□□□ -0.43
TPM1-210ENST00000558264 CYP2D7A0A087X1C5 515 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms