RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 CAP1Q01518 475 aa15.06■□□□□ 0
ACTN1-221ENST00000556571 TAF1CQ15572 869 aaPredicted RBP15.06■□□□□ 0
ACTN1-221ENST00000556571 CCL15Q16663 113 aa15.06■□□□□ 0
ACTN1-221ENST00000556571 FAM84BQ96KN1 310 aaPredicted RBP15.06■□□□□ 0
ACTN1-221ENST00000556571 CSADQ9Y600 493 aa15.06■□□□□ 0
ACTN1-221ENST00000556571 CENPFP49454 3210 aa15.06■□□□□ 0
ACTN1-221ENST00000556571 TCP10L2B9ZVM9 353 aa15.05■□□□□ -0
ACTN1-221ENST00000556571 CRKP46108 304 aa15.05■□□□□ -0
ACTN1-221ENST00000556571 GYG1P46976 350 aa15.05■□□□□ -0
ACTN1-221ENST00000556571 VGLL4Q14135 290 aa15.05■□□□□ -0
ACTN1-221ENST00000556571 SLC9C1Q4G0N8 1177 aa15.05■□□□□ -0
ACTN1-221ENST00000556571 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.05■□□□□ -0
ACTN1-221ENST00000556571 TMEM39BQ9GZU3 492 aa15.05■□□□□ -0
ACTN1-221ENST00000556571 C9orf78Q9NZ63 289 aaPredicted RBP15.05■□□□□ -0
ACTN1-221ENST00000556571 ECM29Q5VYK3 1845 aa15.05■□□□□ -0
ACTN1-221ENST00000556571 CEP290O15078 2479 aa15.05■□□□□ -0
ACTN1-221ENST00000556571 LAMB1P07942 1786 aa15.04■□□□□ -0
ACTN1-221ENST00000556571 EXOSC9Q06265 439 aaKnown RBP15.04■□□□□ -0
ACTN1-221ENST00000556571 CCDC184Q52MB2 194 aa15.04■□□□□ -0
ACTN1-221ENST00000556571 WDR63Q8IWG1 891 aa15.04■□□□□ -0
ACTN1-221ENST00000556571 FAM43AQ8N2R8 423 aa15.04■□□□□ -0
ACTN1-221ENST00000556571 CNKSR2Q8WXI2 1034 aa15.04■□□□□ -0
ACTN1-221ENST00000556571 PTCH2Q9Y6C5 1203 aa15.04■□□□□ -0
ACTN1-221ENST00000556571 ALDH1L1O75891 902 aa15.03■□□□□ -0
ACTN1-221ENST00000556571 HDLBPQ00341 1268 aaKnown RBP15.03■□□□□ -0
ACTN1-221ENST00000556571 SLC4A8Q2Y0W8 1093 aa15.03■□□□□ -0
ACTN1-221ENST00000556571 CDAN1Q8IWY9 1227 aa15.03■□□□□ -0
ACTN1-221ENST00000556571 OTUD5Q96G74 571 aa15.03■□□□□ -0
ACTN1-221ENST00000556571 CACNA1FO60840 1977 aa15.02■□□□□ -0
ACTN1-221ENST00000556571 SPDYE5A6NIY4 337 aa15.02■□□□□ -0
ACTN1-221ENST00000556571 CETPP11597 493 aa15.02■□□□□ -0
ACTN1-221ENST00000556571 FXR1P51114 621 aaKnown RBP eCLIP15.02■□□□□ -0
ACTN1-221ENST00000556571 KIF22Q14807 665 aa15.02■□□□□ -0
ACTN1-221ENST00000556571 VPS37DQ86XT2 251 aa15.02■□□□□ -0
ACTN1-221ENST00000556571 TBC1D22AQ8WUA7 517 aa15.02■□□□□ -0
ACTN1-221ENST00000556571 ZCCHC17Q9NP64 241 aaKnown RBP15.02■□□□□ -0
ACTN1-221ENST00000556571 BRCA2P51587 3418 aa15.02□□□□□ -0.01
ACTN1-221ENST00000556571 RBBP6Q7Z6E9 1792 aaKnown RBP15.01□□□□□ -0.01
ACTN1-221ENST00000556571 MROH5Q6ZUA9 1318 aa15.01□□□□□ -0.01
ACTN1-221ENST00000556571 TLR2O60603 784 aa15.01□□□□□ -0.01
ACTN1-221ENST00000556571 GNRH1P01148 92 aa15.01□□□□□ -0.01
ACTN1-221ENST00000556571 FBXO33Q7Z6M2 555 aa15.01□□□□□ -0.01
ACTN1-221ENST00000556571 ERO1BQ86YB8 467 aa15.01□□□□□ -0.01
ACTN1-221ENST00000556571 HOOK2Q96ED9 719 aa15.01□□□□□ -0.01
ACTN1-221ENST00000556571 MRIQ9BWK5 157 aa15.01□□□□□ -0.01
ACTN1-221ENST00000556571 PUS3Q9BZE2 481 aaKnown RBP15.01□□□□□ -0.01
ACTN1-221ENST00000556571 SRCIN1Q9C0H9 1055 aa15.01□□□□□ -0.01
ACTN1-221ENST00000556571 RIPOR2Q9Y4F9 1068 aa15.01□□□□□ -0.01
ACTN1-221ENST00000556571 FRAT2O75474 233 aaPredicted RBP15□□□□□ -0.01
ACTN1-221ENST00000556571 SNAPC2Q13487 334 aa15□□□□□ -0.01
ACTN1-221ENST00000556571 CAVIN4Q5BKX8 364 aa15□□□□□ -0.01
ACTN1-221ENST00000556571 TEKT1Q969V4 418 aa15□□□□□ -0.01
ACTN1-221ENST00000556571 TMOD2Q9NZR1 351 aa15□□□□□ -0.01
ACTN1-221ENST00000556571 SNCAIPQ9Y6H5 919 aa15□□□□□ -0.01
ACTN1-221ENST00000556571 BTBD19C9JJ37 291 aa14.99□□□□□ -0.01
ACTN1-221ENST00000556571 PRMT2P55345 433 aa14.99□□□□□ -0.01
ACTN1-221ENST00000556571 LACTBP83111 547 aaPredicted RBP14.99□□□□□ -0.01
ACTN1-221ENST00000556571 CHAF1AQ13111 956 aaPredicted RBP14.99□□□□□ -0.01
ACTN1-221ENST00000556571 GRIK5Q16478 980 aa14.99□□□□□ -0.01
ACTN1-221ENST00000556571 FKBP1CQ5VVH2 108 aa14.99□□□□□ -0.01
ACTN1-221ENST00000556571 SLC4A10Q6U841 1118 aa14.99□□□□□ -0.01
ACTN1-221ENST00000556571 FAM83AQ86UY5 434 aa14.99□□□□□ -0.01
ACTN1-221ENST00000556571 SUCLG2Q96I99 432 aa14.99□□□□□ -0.01
ACTN1-221ENST00000556571 WRNIP1Q96S55 665 aa14.99□□□□□ -0.01
ACTN1-221ENST00000556571 IQSEC3Q9UPP2 1182 aaPredicted RBP14.99□□□□□ -0.01
ACTN1-221ENST00000556571 COLQQ9Y215 455 aaPredicted RBP14.99□□□□□ -0.01
ACTN1-221ENST00000556571 SALL2Q9Y467 1007 aaPredicted RBP14.99□□□□□ -0.01
ACTN1-221ENST00000556571 TRIOBPQ9H2D6 2365 aa14.99□□□□□ -0.01
ACTN1-221ENST00000556571 A0A1B0GUL6 1792 aa14.98□□□□□ -0.01
ACTN1-221ENST00000556571 IRF6O14896 467 aa14.98□□□□□ -0.01
ACTN1-221ENST00000556571 CACNB3P54284 484 aa14.98□□□□□ -0.01
ACTN1-221ENST00000556571 PPIL2Q13356 520 aa14.98□□□□□ -0.01
ACTN1-221ENST00000556571 DCAF15Q66K64 600 aa14.98□□□□□ -0.01
ACTN1-221ENST00000556571 SH3TC2Q8TF17 1288 aa14.98□□□□□ -0.01
ACTN1-221ENST00000556571 ZKSCAN4Q969J2 545 aaPredicted RBP14.98□□□□□ -0.01
ACTN1-221ENST00000556571 KAZALD1Q96I82 304 aa14.98□□□□□ -0.01
ACTN1-221ENST00000556571 ZDHHC15Q96MV8 337 aa14.98□□□□□ -0.01
ACTN1-221ENST00000556571 ARHGAP39Q9C0H5 1083 aa14.98□□□□□ -0.01
ACTN1-221ENST00000556571 OTOFQ9HC10 1997 aa14.97□□□□□ -0.01
ACTN1-221ENST00000556571 MYCP01106 439 aaPredicted RBP14.97□□□□□ -0.01
ACTN1-221ENST00000556571 METTL24Q5JXM2 366 aa14.97□□□□□ -0.01
ACTN1-221ENST00000556571 SUGT1Q9Y2Z0 365 aa14.97□□□□□ -0.01
ACTN1-221ENST00000556571 UTYO14607 1347 aa14.96□□□□□ -0.01
ACTN1-221ENST00000556571 MAST3O60307 1309 aa14.96□□□□□ -0.01
ACTN1-221ENST00000556571 H0YGN5 161 aa14.96□□□□□ -0.01
ACTN1-221ENST00000556571 PDE8BO95263 885 aa14.96□□□□□ -0.01
ACTN1-221ENST00000556571 NBPF7P0C2Y1 421 aaPredicted RBP14.96□□□□□ -0.01
ACTN1-221ENST00000556571 PPATQ06203 517 aa14.96□□□□□ -0.01
ACTN1-221ENST00000556571 RABL6Q3YEC7 729 aaPredicted RBP14.96□□□□□ -0.01
ACTN1-221ENST00000556571 APOBEC3HQ6NTF7 200 aaKnown RBP14.96□□□□□ -0.01
ACTN1-221ENST00000556571 HHIPL2Q6UWX4 724 aa14.96□□□□□ -0.01
ACTN1-221ENST00000556571 HOXD10P28358 340 aa14.95□□□□□ -0.02
ACTN1-221ENST00000556571 BCAMP50895 628 aa14.95□□□□□ -0.02
ACTN1-221ENST00000556571 LRRC24Q50LG9 513 aa14.95□□□□□ -0.02
ACTN1-221ENST00000556571 C17orf99Q6UX52 265 aa14.95□□□□□ -0.02
ACTN1-221ENST00000556571 ZNF341Q9BYN7 854 aa14.95□□□□□ -0.02
ACTN1-221ENST00000556571 BICC1Q9H694 974 aaKnown RBP14.95□□□□□ -0.02
ACTN1-221ENST00000556571 MRS2Q9HD23 443 aa14.95□□□□□ -0.02
ACTN1-221ENST00000556571 SPINK5Q9NQ38 1064 aaPredicted RBP14.95□□□□□ -0.02
ACTN1-221ENST00000556571 ANKRD23Q86SG2 305 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms