RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 MKNK2Q9HBH9 465 aa17.11■□□□□ 0.33
ARHGEF40-207ENST00000556399 TLR7Q9NYK1 1049 aaKnown RBP17.11■□□□□ 0.33
ARHGEF40-207ENST00000556399 MYSM1Q5VVJ2 828 aa17.11■□□□□ 0.33
ARHGEF40-207ENST00000556399 C11orf57Q6ZUT1 292 aaPredicted RBP17.11■□□□□ 0.33
ARHGEF40-207ENST00000556399 HDXQ7Z353 690 aa17.11■□□□□ 0.33
ARHGEF40-207ENST00000556399 ESR2Q92731 530 aa17.11■□□□□ 0.33
ARHGEF40-207ENST00000556399 TEX13AQ9BXU3 409 aaPredicted RBP17.11■□□□□ 0.33
ARHGEF40-207ENST00000556399 GUCA1BQ9UMX6 200 aa17.11■□□□□ 0.33
ARHGEF40-207ENST00000556399 YEATS2Q9ULM3 1422 aa17.11■□□□□ 0.33
ARHGEF40-207ENST00000556399 CYLC1P35663 651 aaPredicted RBP17.11■□□□□ 0.33
ARHGEF40-207ENST00000556399 SPECC1Q5M775 1068 aa17.11■□□□□ 0.33
ARHGEF40-207ENST00000556399 PLBD2Q8NHP8 589 aa17.11■□□□□ 0.33
ARHGEF40-207ENST00000556399 ZNF594Q96JF6 807 aaPredicted RBP17.11■□□□□ 0.33
ARHGEF40-207ENST00000556399 PCDHA7Q9UN72 937 aa17.11■□□□□ 0.33
ARHGEF40-207ENST00000556399 ANGEL1Q9UNK9 670 aaKnown RBP17.11■□□□□ 0.33
ARHGEF40-207ENST00000556399 MLH3Q9UHC1 1453 aa17.11■□□□□ 0.33
ARHGEF40-207ENST00000556399 B4E1Z4 1266 aa17.1■□□□□ 0.33
ARHGEF40-207ENST00000556399 POLA2Q14181 598 aa17.1■□□□□ 0.33
ARHGEF40-207ENST00000556399 SETBP1Q9Y6X0 1596 aa17.1■□□□□ 0.33
ARHGEF40-207ENST00000556399 CNGA4Q8IV77 575 aa17.1■□□□□ 0.33
ARHGEF40-207ENST00000556399 IGSF22Q8N9C0 903 aa17.1■□□□□ 0.33
ARHGEF40-207ENST00000556399 DCAF5Q96JK2 942 aa17.1■□□□□ 0.33
ARHGEF40-207ENST00000556399 CUTAO60888 179 aa17.1■□□□□ 0.33
ARHGEF40-207ENST00000556399 USP5P45974 858 aa17.1■□□□□ 0.33
ARHGEF40-207ENST00000556399 ENOX2Q16206 610 aaKnown RBP17.1■□□□□ 0.33
ARHGEF40-207ENST00000556399 SAMD1Q6SPF0 538 aaPredicted RBP17.1■□□□□ 0.33
ARHGEF40-207ENST00000556399 ZNF589Q86UQ0 364 aaPredicted RBP17.1■□□□□ 0.33
ARHGEF40-207ENST00000556399 ZNF274Q96GC6 653 aaPredicted RBP17.1■□□□□ 0.33
ARHGEF40-207ENST00000556399 TCP11L1Q9NUJ3 509 aa17.1■□□□□ 0.33
ARHGEF40-207ENST00000556399 IQGAP1P46940 1657 aa17.1■□□□□ 0.33
ARHGEF40-207ENST00000556399 FAM114A1Q8IWE2 563 aa17.1■□□□□ 0.33
ARHGEF40-207ENST00000556399 TSG101Q99816 390 aa17.1■□□□□ 0.33
ARHGEF40-207ENST00000556399 NFE2L3Q9Y4A8 694 aa17.1■□□□□ 0.33
ARHGEF40-207ENST00000556399 FGFR1OPO95684 399 aaKnown RBP17.09■□□□□ 0.33
ARHGEF40-207ENST00000556399 PFKFB1P16118 471 aa17.09■□□□□ 0.33
ARHGEF40-207ENST00000556399 STAT6P42226 847 aa17.09■□□□□ 0.33
ARHGEF40-207ENST00000556399 CHMP4BP1P59074 171 aa17.09■□□□□ 0.33
ARHGEF40-207ENST00000556399 MTX1Q13505 466 aa17.09■□□□□ 0.33
ARHGEF40-207ENST00000556399 IFIT1BQ5T764 474 aaKnown RBP17.09■□□□□ 0.33
ARHGEF40-207ENST00000556399 C10orf67Q8IYJ2 551 aa17.09■□□□□ 0.33
ARHGEF40-207ENST00000556399 NECTIN1Q15223 517 aa17.09■□□□□ 0.33
ARHGEF40-207ENST00000556399 APPBP2Q92624 585 aa17.09■□□□□ 0.33
ARHGEF40-207ENST00000556399 ABCC3O15438 1527 aa17.09■□□□□ 0.33
ARHGEF40-207ENST00000556399 NEO1Q92859 1461 aa17.09■□□□□ 0.33
ARHGEF40-207ENST00000556399 NLRP1Q9C000 1473 aa17.09■□□□□ 0.33
ARHGEF40-207ENST00000556399 ADCY9O60503 1353 aa17.09■□□□□ 0.33
ARHGEF40-207ENST00000556399 KRT40Q6A162 431 aa17.09■□□□□ 0.33
ARHGEF40-207ENST00000556399 BICDL1Q6ZP65 573 aa17.09■□□□□ 0.33
ARHGEF40-207ENST00000556399 SEC63Q9UGP8 760 aaKnown RBP17.09■□□□□ 0.33
ARHGEF40-207ENST00000556399 A0A087WWV3 80 aa17.09■□□□□ 0.33
ARHGEF40-207ENST00000556399 POLR2DO15514 142 aaKnown RBP17.09■□□□□ 0.33
ARHGEF40-207ENST00000556399 GPAA1O43292 621 aa17.09■□□□□ 0.33
ARHGEF40-207ENST00000556399 KIF5BP33176 963 aa17.09■□□□□ 0.33
ARHGEF40-207ENST00000556399 MEX3CQ5U5Q3 659 aaKnown RBP17.09■□□□□ 0.33
ARHGEF40-207ENST00000556399 NDUFA8P51970 172 aa17.08■□□□□ 0.33
ARHGEF40-207ENST00000556399 ETF1P62495 437 aaKnown RBP17.08■□□□□ 0.33
ARHGEF40-207ENST00000556399 PNOCQ13519 176 aa17.08■□□□□ 0.33
ARHGEF40-207ENST00000556399 RILPL1Q5EBL4 403 aa17.08■□□□□ 0.33
ARHGEF40-207ENST00000556399 CABP5Q9NP86 173 aa17.08■□□□□ 0.33
ARHGEF40-207ENST00000556399 PRR36Q9H6K5 1346 aa17.08■□□□□ 0.33
ARHGEF40-207ENST00000556399 TULP4Q9NRJ4 1543 aa17.08■□□□□ 0.33
ARHGEF40-207ENST00000556399 CCDC96Q2M329 555 aa17.08■□□□□ 0.32
ARHGEF40-207ENST00000556399 PHKBQ93100 1093 aa17.08■□□□□ 0.32
ARHGEF40-207ENST00000556399 CAPZA3Q96KX2 299 aa17.08■□□□□ 0.32
ARHGEF40-207ENST00000556399 AKR1B10O60218 316 aa17.08■□□□□ 0.32
ARHGEF40-207ENST00000556399 CYP7A1P22680 504 aa17.08■□□□□ 0.32
ARHGEF40-207ENST00000556399 MLKLQ8NB16 471 aa17.08■□□□□ 0.32
ARHGEF40-207ENST00000556399 TSPY2A6NKD2 308 aa17.08■□□□□ 0.32
ARHGEF40-207ENST00000556399 UBXN1Q04323 297 aa17.08■□□□□ 0.32
ARHGEF40-207ENST00000556399 XAGE2Q96GT9 111 aa17.08■□□□□ 0.32
ARHGEF40-207ENST00000556399 TTC14Q96N46 770 aa17.08■□□□□ 0.32
ARHGEF40-207ENST00000556399 ZKSCAN3Q9BRR0 538 aa17.08■□□□□ 0.32
ARHGEF40-207ENST00000556399 WDHD1O75717 1129 aaPredicted RBP17.07■□□□□ 0.32
ARHGEF40-207ENST00000556399 OAS2P29728 719 aaKnown RBP17.07■□□□□ 0.32
ARHGEF40-207ENST00000556399 CCT6AP40227 531 aaKnown RBP17.07■□□□□ 0.32
ARHGEF40-207ENST00000556399 PROSER3Q2NL68 480 aa17.07■□□□□ 0.32
ARHGEF40-207ENST00000556399 RNF187Q5TA31 235 aaPredicted RBP17.07■□□□□ 0.32
ARHGEF40-207ENST00000556399 ZCRB1Q8TBF4 217 aaKnown RBP17.07■□□□□ 0.32
ARHGEF40-207ENST00000556399 DRC1Q96MC2 740 aa17.07■□□□□ 0.32
ARHGEF40-207ENST00000556399 ERCC6L2Q5T890 1561 aa17.07■□□□□ 0.32
ARHGEF40-207ENST00000556399 ADGRB3O60242 1522 aa17.07■□□□□ 0.32
ARHGEF40-207ENST00000556399 SYCP1Q15431 976 aa17.07■□□□□ 0.32
ARHGEF40-207ENST00000556399 NBPF11Q86T75 865 aa17.07■□□□□ 0.32
ARHGEF40-207ENST00000556399 TMEM87BQ96K49 555 aa17.07■□□□□ 0.32
ARHGEF40-207ENST00000556399 FTOQ9C0B1 505 aaKnown RBP eCLIP17.07■□□□□ 0.32
ARHGEF40-207ENST00000556399 TUBBP07437 444 aa17.07■□□□□ 0.32
ARHGEF40-207ENST00000556399 KRT2P35908 639 aa17.07■□□□□ 0.32
ARHGEF40-207ENST00000556399 AMPD3Q01432 767 aa17.07■□□□□ 0.32
ARHGEF40-207ENST00000556399 MAGEB6Q8N7X4 407 aa17.07■□□□□ 0.32
ARHGEF40-207ENST00000556399 HAUS7Q99871 368 aa17.07■□□□□ 0.32
ARHGEF40-207ENST00000556399 CYP21A2P08686 494 aa17.07■□□□□ 0.32
ARHGEF40-207ENST00000556399 IDEP14735 1019 aa17.07■□□□□ 0.32
ARHGEF40-207ENST00000556399 CCDC178Q5BJE1 867 aa17.07■□□□□ 0.32
ARHGEF40-207ENST00000556399 SLC52A2Q9HAB3 445 aa17.07■□□□□ 0.32
ARHGEF40-207ENST00000556399 PSMA7O14818 248 aa17.06■□□□□ 0.32
ARHGEF40-207ENST00000556399 KRT86O43790 486 aa17.06■□□□□ 0.32
ARHGEF40-207ENST00000556399 KRT83P78385 493 aa17.06■□□□□ 0.32
ARHGEF40-207ENST00000556399 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.06■□□□□ 0.32
ARHGEF40-207ENST00000556399 NAA15Q9BXJ9 866 aaKnown RBP17.06■□□□□ 0.32
ARHGEF40-207ENST00000556399 SPTLC3Q9NUV7 552 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms