RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 ZNF70Q9UC06 446 aaPredicted RBP15.68■□□□□ 0.1
SNX6-207ENST00000556303 AKAP11Q9UKA4 1901 aa15.67■□□□□ 0.1
SNX6-207ENST00000556303 SEMA3EO15041 775 aa15.67■□□□□ 0.1
SNX6-207ENST00000556303 GNAI2P04899 355 aa15.67■□□□□ 0.1
SNX6-207ENST00000556303 TM4SF4P48230 202 aa15.67■□□□□ 0.1
SNX6-207ENST00000556303 TNNI2P48788 182 aa15.67■□□□□ 0.1
SNX6-207ENST00000556303 CHAF1AQ13111 956 aaPredicted RBP15.67■□□□□ 0.1
SNX6-207ENST00000556303 RASA3Q14644 834 aa15.67■□□□□ 0.1
SNX6-207ENST00000556303 ATP2B3Q16720 1220 aa15.67■□□□□ 0.1
SNX6-207ENST00000556303 ZKSCAN2Q63HK3 967 aa15.67■□□□□ 0.1
SNX6-207ENST00000556303 MOB2Q70IA6 237 aa15.67■□□□□ 0.1
SNX6-207ENST00000556303 TEKT1Q969V4 418 aa15.67■□□□□ 0.1
SNX6-207ENST00000556303 ZDHHC15Q96MV8 337 aa15.67■□□□□ 0.1
SNX6-207ENST00000556303 RNF186Q9NXI6 227 aa15.67■□□□□ 0.1
SNX6-207ENST00000556303 PCDHAC2Q9Y5I4 1007 aa15.67■□□□□ 0.1
SNX6-207ENST00000556303 ZBED9Q6R2W3 1325 aa15.67■□□□□ 0.1
SNX6-207ENST00000556303 ARAP2Q8WZ64 1704 aa15.66■□□□□ 0.1
SNX6-207ENST00000556303 CLRN2A0PK11 232 aa15.66■□□□□ 0.1
SNX6-207ENST00000556303 IREB2P48200 963 aaKnown RBP15.66■□□□□ 0.1
SNX6-207ENST00000556303 INHBEP58166 350 aa15.66■□□□□ 0.1
SNX6-207ENST00000556303 FKBP1CQ5VVH2 108 aa15.66■□□□□ 0.1
SNX6-207ENST00000556303 HHIPL2Q6UWX4 724 aa15.66■□□□□ 0.1
SNX6-207ENST00000556303 FRAT1Q92837 279 aaPredicted RBP15.66■□□□□ 0.1
SNX6-207ENST00000556303 SIL1Q9H173 461 aa15.66■□□□□ 0.1
SNX6-207ENST00000556303 ANGEL1Q9UNK9 670 aaKnown RBP15.66■□□□□ 0.1
SNX6-207ENST00000556303 IQSEC3Q9UPP2 1182 aaPredicted RBP15.66■□□□□ 0.1
SNX6-207ENST00000556303 AKAP2Q9Y2D5 859 aa15.66■□□□□ 0.1
SNX6-207ENST00000556303 SRGAP3O43295 1099 aa15.65■□□□□ 0.1
SNX6-207ENST00000556303 SREBF2Q12772 1141 aa15.65■□□□□ 0.1
SNX6-207ENST00000556303 SLC10A4Q96EP9 437 aa15.65■□□□□ 0.1
SNX6-207ENST00000556303 TDRD3Q9H7E2 651 aaKnown RBP15.65■□□□□ 0.1
SNX6-207ENST00000556303 TSKSQ9UJT2 592 aa15.65■□□□□ 0.1
SNX6-207ENST00000556303 DENND2AQ9ULE3 1009 aa15.65■□□□□ 0.1
SNX6-207ENST00000556303 TRPA1O75762 1119 aa15.64■□□□□ 0.09
SNX6-207ENST00000556303 ZBTB48P10074 688 aaPredicted RBP15.64■□□□□ 0.09
SNX6-207ENST00000556303 NOM1Q5C9Z4 860 aaKnown RBP15.64■□□□□ 0.09
SNX6-207ENST00000556303 NBPF12Q5TAG4 269 aaPredicted RBP15.64■□□□□ 0.09
SNX6-207ENST00000556303 FAM83AQ86UY5 434 aa15.64■□□□□ 0.09
SNX6-207ENST00000556303 TMOD2Q9NZR1 351 aa15.64■□□□□ 0.09
SNX6-207ENST00000556303 PA2G4Q9UQ80 394 aaKnown RBP15.64■□□□□ 0.09
SNX6-207ENST00000556303 SALL1Q9NSC2 1324 aa15.64■□□□□ 0.09
SNX6-207ENST00000556303 CASP8AP2Q9UKL3 1982 aa15.64■□□□□ 0.09
SNX6-207ENST00000556303 SPRYD7Q5W111 196 aa15.63■□□□□ 0.09
SNX6-207ENST00000556303 ANKRD13AQ8IZ07 590 aa15.63■□□□□ 0.09
SNX6-207ENST00000556303 ZGPATQ8N5A5 531 aaKnown RBP15.63■□□□□ 0.09
SNX6-207ENST00000556303 HOOK2Q96ED9 719 aa15.63■□□□□ 0.09
SNX6-207ENST00000556303 CFHR5Q9BXR6 569 aa15.63■□□□□ 0.09
SNX6-207ENST00000556303 AOX1Q06278 1338 aa15.63■□□□□ 0.09
SNX6-207ENST00000556303 PDS5AQ29RF7 1337 aaKnown RBP15.63■□□□□ 0.09
SNX6-207ENST00000556303 MANSC4A6NHS7 340 aaPredicted RBP15.62■□□□□ 0.09
SNX6-207ENST00000556303 USP2O75604 605 aaPredicted RBP15.62■□□□□ 0.09
SNX6-207ENST00000556303 ALDH1A1P00352 501 aa15.62■□□□□ 0.09
SNX6-207ENST00000556303 PRKG1Q13976 671 aa15.62■□□□□ 0.09
SNX6-207ENST00000556303 GRIK5Q16478 980 aa15.62■□□□□ 0.09
SNX6-207ENST00000556303 APOBEC3HQ6NTF7 200 aaKnown RBP15.62■□□□□ 0.09
SNX6-207ENST00000556303 ABHD8Q96I13 439 aa15.62■□□□□ 0.09
SNX6-207ENST00000556303 TEPSINQ96N21 525 aa15.62■□□□□ 0.09
SNX6-207ENST00000556303 CAPN15O75808 1086 aa15.61■□□□□ 0.09
SNX6-207ENST00000556303 CCDC102BQ68D86 513 aa15.61■□□□□ 0.09
SNX6-207ENST00000556303 FTSJ3Q8IY81 847 aaKnown RBP15.61■□□□□ 0.09
SNX6-207ENST00000556303 TMEM57Q8N5G2 664 aa15.61■□□□□ 0.09
SNX6-207ENST00000556303 CLUAP1Q96AJ1 413 aa15.61■□□□□ 0.09
SNX6-207ENST00000556303 SSC5DA1L4H1 1573 aa15.61■□□□□ 0.09
SNX6-207ENST00000556303 TCP10L2B9ZVM9 353 aa15.6■□□□□ 0.09
SNX6-207ENST00000556303 LDHBP07195 334 aaKnown RBP15.6■□□□□ 0.09
SNX6-207ENST00000556303 G3BP1Q13283 466 aaKnown RBP eCLIP15.6■□□□□ 0.09
SNX6-207ENST00000556303 MVPQ14764 893 aaKnown RBP15.6■□□□□ 0.09
SNX6-207ENST00000556303 MYH13Q9UKX3 1938 aa15.59■□□□□ 0.09
SNX6-207ENST00000556303 A0A1B0GUL7 405 aa15.59■□□□□ 0.09
SNX6-207ENST00000556303 PHKA1P46020 1223 aa15.59■□□□□ 0.09
SNX6-207ENST00000556303 TIMM10P62072 90 aa15.59■□□□□ 0.09
SNX6-207ENST00000556303 SPTY2D1Q68D10 685 aaPredicted RBP15.59■□□□□ 0.09
SNX6-207ENST00000556303 SLF2Q8IX21 1173 aa15.59■□□□□ 0.09
SNX6-207ENST00000556303 WNK4Q96J92 1243 aa15.59■□□□□ 0.09
SNX6-207ENST00000556303 TMEM39BQ9GZU3 492 aa15.59■□□□□ 0.09
SNX6-207ENST00000556303 RPAP1Q9BWH6 1393 aaPredicted RBP15.59■□□□□ 0.09
SNX6-207ENST00000556303 MS4A1P11836 297 aa15.58■□□□□ 0.08
SNX6-207ENST00000556303 MAP3K9P80192 1104 aa15.58■□□□□ 0.08
SNX6-207ENST00000556303 ATP8B2P98198 1209 aa15.58■□□□□ 0.08
SNX6-207ENST00000556303 TFCP2Q12800 502 aa15.58■□□□□ 0.08
SNX6-207ENST00000556303 POLA2Q14181 598 aa15.58■□□□□ 0.08
SNX6-207ENST00000556303 OTUD7BQ6GQQ9 843 aa15.58■□□□□ 0.08
SNX6-207ENST00000556303 FAM163AQ96GL9 167 aaPredicted RBP15.58■□□□□ 0.08
SNX6-207ENST00000556303 XAGE2Q96GT9 111 aa15.58■□□□□ 0.08
SNX6-207ENST00000556303 MCOLN1Q9GZU1 580 aa15.58■□□□□ 0.08
SNX6-207ENST00000556303 TNNQ9UQP3 1299 aa15.58■□□□□ 0.08
SNX6-207ENST00000556303 PNMA6EA0A0J9YXQ4 647 aa15.57■□□□□ 0.08
SNX6-207ENST00000556303 TESPA1A2RU30 521 aaPredicted RBP15.57■□□□□ 0.08
SNX6-207ENST00000556303 ZBTB7BO15156 539 aaPredicted RBP15.57■□□□□ 0.08
SNX6-207ENST00000556303 PRDX5P30044 214 aa15.57■□□□□ 0.08
SNX6-207ENST00000556303 ADORA1P30542 326 aa15.57■□□□□ 0.08
SNX6-207ENST00000556303 DGKZQ13574 1117 aa15.57■□□□□ 0.08
SNX6-207ENST00000556303 PKN2Q16513 984 aaKnown RBP15.57■□□□□ 0.08
SNX6-207ENST00000556303 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.57■□□□□ 0.08
SNX6-207ENST00000556303 SSH3Q8TE77 659 aa15.57■□□□□ 0.08
SNX6-207ENST00000556303 FAM151AQ8WW52 585 aa15.57■□□□□ 0.08
SNX6-207ENST00000556303 CLMNQ96JQ2 1002 aa15.57■□□□□ 0.08
SNX6-207ENST00000556303 GPR108Q9NPR9 543 aa15.57■□□□□ 0.08
SNX6-207ENST00000556303 FZD1Q9UP38 647 aa15.57■□□□□ 0.08
SNX6-207ENST00000556303 DAGLAQ9Y4D2 1042 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms