RNA–Protein interactions for RNA: ENST00000556020.1

GPHN-211, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-211ENST00000556020 SPDYE2Q495Y8 402 aa21.42■■□□□ 1.02
GPHN-211ENST00000556020 NBPF12Q5TAG4 269 aaPredicted RBP21.42■■□□□ 1.02
GPHN-211ENST00000556020 INTS3Q68E01 1043 aaKnown RBP21.42■■□□□ 1.02
GPHN-211ENST00000556020 LPIN2Q92539 896 aa21.42■■□□□ 1.02
GPHN-211ENST00000556020 TRIM27P14373 513 aa21.41■■□□□ 1.02
GPHN-211ENST00000556020 ATP2B3Q16720 1220 aa21.41■■□□□ 1.02
GPHN-211ENST00000556020 SUPT20HL1Q3ZLR7 823 aa21.41■■□□□ 1.02
GPHN-211ENST00000556020 REM2Q8IYK8 340 aaPredicted RBP21.41■■□□□ 1.02
GPHN-211ENST00000556020 CLUAP1Q96AJ1 413 aa21.41■■□□□ 1.02
GPHN-211ENST00000556020 CEP126Q9P2H0 1117 aa21.41■■□□□ 1.02
GPHN-211ENST00000556020 TCP10L2B9ZVM9 353 aa21.4■■□□□ 1.02
GPHN-211ENST00000556020 PPP1R12BO60237 982 aaPredicted RBP21.4■■□□□ 1.02
GPHN-211ENST00000556020 CIAO1O76071 339 aa21.4■■□□□ 1.02
GPHN-211ENST00000556020 DGKZQ13574 1117 aa21.4■■□□□ 1.02
GPHN-211ENST00000556020 GNAI3P08754 354 aa21.39■■□□□ 1.01
GPHN-211ENST00000556020 TNFAIP1Q13829 316 aa21.39■■□□□ 1.01
GPHN-211ENST00000556020 LDLRAD1Q5T700 205 aa21.39■■□□□ 1.01
GPHN-211ENST00000556020 ATF7IPQ6VMQ6 1270 aa21.39■■□□□ 1.01
GPHN-211ENST00000556020 TEKT1Q969V4 418 aa21.39■■□□□ 1.01
GPHN-211ENST00000556020 MCOLN1Q9GZU1 580 aa21.39■■□□□ 1.01
GPHN-211ENST00000556020 FBXO3Q9UK99 471 aa21.39■■□□□ 1.01
GPHN-211ENST00000556020 SRGAP3O43295 1099 aa21.38■■□□□ 1.01
GPHN-211ENST00000556020 IL15P40933 162 aaPredicted RBP21.38■■□□□ 1.01
GPHN-211ENST00000556020 CACNB3P54284 484 aa21.38■■□□□ 1.01
GPHN-211ENST00000556020 SLC10A4Q96EP9 437 aa21.38■■□□□ 1.01
GPHN-211ENST00000556020 CLMNQ96JQ2 1002 aa21.38■■□□□ 1.01
GPHN-211ENST00000556020 CCDC85CA6NKD9 419 aa21.37■■□□□ 1.01
GPHN-211ENST00000556020 SPRYD7Q5W111 196 aa21.37■■□□□ 1.01
GPHN-211ENST00000556020 CDAN1Q8IWY9 1227 aa21.37■■□□□ 1.01
GPHN-211ENST00000556020 COPRSQ9NQ92 184 aa21.37■■□□□ 1.01
GPHN-211ENST00000556020 IREB2P48200 963 aaKnown RBP21.36■■□□□ 1.01
GPHN-211ENST00000556020 TNNI2P48788 182 aa21.36■■□□□ 1.01
GPHN-211ENST00000556020 HDLBPQ00341 1268 aaKnown RBP21.36■■□□□ 1.01
GPHN-211ENST00000556020 TMEM39BQ9GZU3 492 aa21.36■■□□□ 1.01
GPHN-211ENST00000556020 GNL3LQ9NVN8 582 aaKnown RBP21.36■■□□□ 1.01
GPHN-211ENST00000556020 OTOFQ9HC10 1997 aa21.36■■□□□ 1.01
GPHN-211ENST00000556020 MAST3O60307 1309 aa21.35■■□□□ 1.01
GPHN-211ENST00000556020 USP2O75604 605 aaPredicted RBP21.35■■□□□ 1.01
GPHN-211ENST00000556020 TBC1D8O95759 1140 aa21.35■■□□□ 1.01
GPHN-211ENST00000556020 ADORA1P30542 326 aa21.35■■□□□ 1.01
GPHN-211ENST00000556020 SREBF2Q12772 1141 aa21.35■■□□□ 1.01
GPHN-211ENST00000556020 MAP3K11Q16584 847 aa21.35■■□□□ 1.01
GPHN-211ENST00000556020 ZKSCAN2Q63HK3 967 aa21.35■■□□□ 1.01
GPHN-211ENST00000556020 WDR66Q8TBY9 1149 aa21.35■■□□□ 1.01
GPHN-211ENST00000556020 PHKA1P46020 1223 aa21.34■■□□□ 1.01
GPHN-211ENST00000556020 TM4SF4P48230 202 aa21.34■■□□□ 1.01
GPHN-211ENST00000556020 WNK4Q96J92 1243 aa21.34■■□□□ 1.01
GPHN-211ENST00000556020 TMOD2Q9NZR1 351 aa21.34■■□□□ 1.01
GPHN-211ENST00000556020 GNAI2P04899 355 aa21.33■■□□□ 1.01
GPHN-211ENST00000556020 TMEM57Q8N5G2 664 aa21.33■■□□□ 1.01
GPHN-211ENST00000556020 ZDHHC15Q96MV8 337 aa21.33■■□□□ 1.01
GPHN-211ENST00000556020 TEPSINQ96N21 525 aa21.33■■□□□ 1.01
GPHN-211ENST00000556020 SUGT1Q9Y2Z0 365 aa21.33■■□□□ 1.01
GPHN-211ENST00000556020 TIMM10P62072 90 aa21.32■■□□□ 1
GPHN-211ENST00000556020 TFCP2Q12800 502 aa21.32■■□□□ 1
GPHN-211ENST00000556020 ELP3Q9H9T3 547 aa21.32■■□□□ 1
GPHN-211ENST00000556020 PRDX5P30044 214 aa21.31■■□□□ 1
GPHN-211ENST00000556020 MTX1Q13505 466 aa21.31■■□□□ 1
GPHN-211ENST00000556020 DIXDC1Q155Q3 683 aa21.31■■□□□ 1
GPHN-211ENST00000556020 APOBEC3HQ6NTF7 200 aaKnown RBP21.31■■□□□ 1
GPHN-211ENST00000556020 HHIPL2Q6UWX4 724 aa21.31■■□□□ 1
GPHN-211ENST00000556020 ANKRD13AQ8IZ07 590 aa21.31■■□□□ 1
GPHN-211ENST00000556020 DENND2AQ9ULE3 1009 aa21.31■■□□□ 1
GPHN-211ENST00000556020 MANSC4A6NHS7 340 aaPredicted RBP21.3■■□□□ 1
GPHN-211ENST00000556020 LDHBP07195 334 aaKnown RBP21.3■■□□□ 1
GPHN-211ENST00000556020 CCDC102BQ68D86 513 aa21.3■■□□□ 1
GPHN-211ENST00000556020 MRIQ9BWK5 157 aa21.3■■□□□ 1
GPHN-211ENST00000556020 PNMA6EA0A0J9YXQ4 647 aa21.29■■□□□ 1
GPHN-211ENST00000556020 A0A1B0GUL7 405 aa21.29■■□□□ 1
GPHN-211ENST00000556020 ZBTB48P10074 688 aaPredicted RBP21.29■■□□□ 1
GPHN-211ENST00000556020 FTSJ3Q8IY81 847 aaKnown RBP21.29■■□□□ 1
GPHN-211ENST00000556020 NEUROD6Q96NK8 337 aa21.29■■□□□ 1
GPHN-211ENST00000556020 DAGLAQ9Y4D2 1042 aa21.29■■□□□ 1
GPHN-211ENST00000556020 AK9Q5TCS8 1911 aa21.28■■□□□ 1
GPHN-211ENST00000556020 UNCXA6NJT0 531 aa21.28■■□□□ 1
GPHN-211ENST00000556020 SEMA3EO15041 775 aa21.28■■□□□ 1
GPHN-211ENST00000556020 GJA5P36382 358 aa21.28■■□□□ 1
GPHN-211ENST00000556020 ZNF296Q8WUU4 475 aaPredicted RBP21.28■■□□□ 1
GPHN-211ENST00000556020 XAGE2Q96GT9 111 aa21.28■■□□□ 1
GPHN-211ENST00000556020 AKAP2Q9Y2D5 859 aa21.28■■□□□ 1
GPHN-211ENST00000556020 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.28■■□□□ 1
GPHN-211ENST00000556020 CTU1Q7Z7A3 348 aaKnown RBP21.27■■□□□ 1
GPHN-211ENST00000556020 IFNL1Q8IU54 200 aa21.27■■□□□ 1
GPHN-211ENST00000556020 OPTNQ96CV9 577 aa21.27■■□□□ 1
GPHN-211ENST00000556020 R3HDMLQ9H3Y0 253 aa21.27■■□□□ 1
GPHN-211ENST00000556020 C1orf115Q9H7X2 142 aa21.27■■□□□ 1
GPHN-211ENST00000556020 MYH2Q9UKX2 1941 aa21.27■■□□□ 1
GPHN-211ENST00000556020 ZBED9Q6R2W3 1325 aa21.27■□□□□ 0.99
GPHN-211ENST00000556020 LAMB1P07942 1786 aa21.26■□□□□ 0.99
GPHN-211ENST00000556020 GPR25O00155 361 aa21.26■□□□□ 0.99
GPHN-211ENST00000556020 MAP3K9P80192 1104 aa21.26■□□□□ 0.99
GPHN-211ENST00000556020 TCP10Q12799 353 aa21.26■□□□□ 0.99
GPHN-211ENST00000556020 G3BP1Q13283 466 aaKnown RBP eCLIP21.26■□□□□ 0.99
GPHN-211ENST00000556020 RASGRF1Q13972 1273 aa21.26■□□□□ 0.99
GPHN-211ENST00000556020 VGLL4Q14135 290 aa21.26■□□□□ 0.99
GPHN-211ENST00000556020 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.26■□□□□ 0.99
GPHN-211ENST00000556020 FAM83AQ86UY5 434 aa21.26■□□□□ 0.99
GPHN-211ENST00000556020 ITPRIPQ8IWB1 547 aa21.26■□□□□ 0.99
GPHN-211ENST00000556020 CNKSR2Q8WXI2 1034 aa21.26■□□□□ 0.99
GPHN-211ENST00000556020 ABCF2Q9UG63 623 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms