RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 ATF7IPQ6VMQ6 1270 aa17.55■□□□□ 0.4
SPTLC2-202ENST00000554365 ANKRD13AQ8IZ07 590 aa17.55■□□□□ 0.4
SPTLC2-202ENST00000554365 TTF2Q9UNY4 1162 aaKnown RBP17.55■□□□□ 0.4
SPTLC2-202ENST00000554365 FAM205AQ6ZU69 1335 aa17.54■□□□□ 0.4
SPTLC2-202ENST00000554365 RLBP1P12271 317 aa17.54■□□□□ 0.4
SPTLC2-202ENST00000554365 HIBADHP31937 336 aaKnown RBP17.54■□□□□ 0.4
SPTLC2-202ENST00000554365 OTUD7BQ6GQQ9 843 aa17.54■□□□□ 0.4
SPTLC2-202ENST00000554365 CD99L2Q8TCZ2 262 aa17.54■□□□□ 0.4
SPTLC2-202ENST00000554365 ERO1AQ96HE7 468 aa17.54■□□□□ 0.4
SPTLC2-202ENST00000554365 TDRD3Q9H7E2 651 aaKnown RBP17.54■□□□□ 0.4
SPTLC2-202ENST00000554365 ELP3Q9H9T3 547 aa17.54■□□□□ 0.4
SPTLC2-202ENST00000554365 ZNF70Q9UC06 446 aaPredicted RBP17.54■□□□□ 0.4
SPTLC2-202ENST00000554365 CRHR2Q13324 411 aa17.53■□□□□ 0.4
SPTLC2-202ENST00000554365 TNFAIP1Q13829 316 aa17.53■□□□□ 0.4
SPTLC2-202ENST00000554365 SPDYE2Q495Y8 402 aa17.53■□□□□ 0.4
SPTLC2-202ENST00000554365 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.53■□□□□ 0.4
SPTLC2-202ENST00000554365 TDRD7Q8NHU6 1098 aaKnown RBP17.53■□□□□ 0.4
SPTLC2-202ENST00000554365 PUS3Q9BZE2 481 aaKnown RBP17.53■□□□□ 0.4
SPTLC2-202ENST00000554365 SRCIN1Q9C0H9 1055 aa17.53■□□□□ 0.4
SPTLC2-202ENST00000554365 SERPINA10Q9UK55 444 aa17.53■□□□□ 0.4
SPTLC2-202ENST00000554365 IPO8O15397 1037 aaKnown RBP17.52■□□□□ 0.4
SPTLC2-202ENST00000554365 ALDH1L1O75891 902 aa17.52■□□□□ 0.4
SPTLC2-202ENST00000554365 UBE4AQ14139 1066 aa17.52■□□□□ 0.4
SPTLC2-202ENST00000554365 OPTNQ96CV9 577 aa17.52■□□□□ 0.4
SPTLC2-202ENST00000554365 SUCLG2Q96I99 432 aa17.52■□□□□ 0.4
SPTLC2-202ENST00000554365 FAM84BQ96KN1 310 aaPredicted RBP17.52■□□□□ 0.4
SPTLC2-202ENST00000554365 TCP10L2B9ZVM9 353 aa17.51■□□□□ 0.39
SPTLC2-202ENST00000554365 PDE3AQ14432 1141 aa17.51■□□□□ 0.39
SPTLC2-202ENST00000554365 CDAN1Q8IWY9 1227 aa17.51■□□□□ 0.39
SPTLC2-202ENST00000554365 DZIP1LQ8IYY4 767 aaKnown RBP17.51■□□□□ 0.39
SPTLC2-202ENST00000554365 PANK1Q8TE04 598 aa17.51■□□□□ 0.39
SPTLC2-202ENST00000554365 PTPN18Q99952 460 aa17.51■□□□□ 0.39
SPTLC2-202ENST00000554365 API5Q9BZZ5 524 aaKnown RBP17.51■□□□□ 0.39
SPTLC2-202ENST00000554365 PTPN22Q9Y2R2 807 aa17.51■□□□□ 0.39
SPTLC2-202ENST00000554365 POTEFA5A3E0 1075 aa17.5■□□□□ 0.39
SPTLC2-202ENST00000554365 CRKP46108 304 aa17.5■□□□□ 0.39
SPTLC2-202ENST00000554365 IRX6P78412 446 aaPredicted RBP17.5■□□□□ 0.39
SPTLC2-202ENST00000554365 SP3Q02447 781 aa17.5■□□□□ 0.39
SPTLC2-202ENST00000554365 INTS3Q68E01 1043 aaKnown RBP17.5■□□□□ 0.39
SPTLC2-202ENST00000554365 VPS37DQ86XT2 251 aa17.5■□□□□ 0.39
SPTLC2-202ENST00000554365 CLUAP1Q96AJ1 413 aa17.5■□□□□ 0.39
SPTLC2-202ENST00000554365 EFCC1Q9HA90 598 aa17.5■□□□□ 0.39
SPTLC2-202ENST00000554365 IQSEC3Q9UPP2 1182 aaPredicted RBP17.5■□□□□ 0.39
SPTLC2-202ENST00000554365 LAMB1P07942 1786 aa17.5■□□□□ 0.39
SPTLC2-202ENST00000554365 TESPA1A2RU30 521 aaPredicted RBP17.49■□□□□ 0.39
SPTLC2-202ENST00000554365 FRAT2O75474 233 aaPredicted RBP17.49■□□□□ 0.39
SPTLC2-202ENST00000554365 TNNI2P48788 182 aa17.49■□□□□ 0.39
SPTLC2-202ENST00000554365 CHAF1AQ13111 956 aaPredicted RBP17.49■□□□□ 0.39
SPTLC2-202ENST00000554365 CNKSR2Q8WXI2 1034 aa17.49■□□□□ 0.39
SPTLC2-202ENST00000554365 TMEM39BQ9GZU3 492 aa17.49■□□□□ 0.39
SPTLC2-202ENST00000554365 OTOFQ9HC10 1997 aa17.49■□□□□ 0.39
SPTLC2-202ENST00000554365 NBPF7P0C2Y1 421 aaPredicted RBP17.48■□□□□ 0.39
SPTLC2-202ENST00000554365 GRIK5Q16478 980 aa17.48■□□□□ 0.39
SPTLC2-202ENST00000554365 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.48■□□□□ 0.39
SPTLC2-202ENST00000554365 KAZALD1Q96I82 304 aa17.48■□□□□ 0.39
SPTLC2-202ENST00000554365 TEPSINQ96N21 525 aa17.48■□□□□ 0.39
SPTLC2-202ENST00000554365 BICC1Q9H694 974 aaKnown RBP17.48■□□□□ 0.39
SPTLC2-202ENST00000554365 RIPOR2Q9Y4F9 1068 aa17.48■□□□□ 0.39
SPTLC2-202ENST00000554365 MROH5Q6ZUA9 1318 aa17.47■□□□□ 0.39
SPTLC2-202ENST00000554365 ARAP2Q8WZ64 1704 aa17.47■□□□□ 0.39
SPTLC2-202ENST00000554365 CCL15-CCL14A0A0B4J2E2 113 aa17.47■□□□□ 0.39
SPTLC2-202ENST00000554365 MAP3K9P80192 1104 aa17.47■□□□□ 0.39
SPTLC2-202ENST00000554365 VGLL4Q14135 290 aa17.47■□□□□ 0.39
SPTLC2-202ENST00000554365 CCL15Q16663 113 aa17.47■□□□□ 0.39
SPTLC2-202ENST00000554365 METTL24Q5JXM2 366 aa17.47■□□□□ 0.39
SPTLC2-202ENST00000554365 TMEM57Q8N5G2 664 aa17.47■□□□□ 0.39
SPTLC2-202ENST00000554365 MS4A4AQ96JQ5 239 aa17.47■□□□□ 0.39
SPTLC2-202ENST00000554365 CSADQ9Y600 493 aa17.47■□□□□ 0.39
SPTLC2-202ENST00000554365 CACNB3P54284 484 aa17.46■□□□□ 0.39
SPTLC2-202ENST00000554365 TAF1CQ15572 869 aaPredicted RBP17.46■□□□□ 0.39
SPTLC2-202ENST00000554365 LRRC24Q50LG9 513 aa17.46■□□□□ 0.39
SPTLC2-202ENST00000554365 CAVIN4Q5BKX8 364 aa17.46■□□□□ 0.39
SPTLC2-202ENST00000554365 BRI3BPQ8WY22 251 aa17.46■□□□□ 0.39
SPTLC2-202ENST00000554365 OTUD5Q96G74 571 aa17.46■□□□□ 0.39
SPTLC2-202ENST00000554365 CRBNQ96SW2 442 aa17.46■□□□□ 0.39
SPTLC2-202ENST00000554365 MS4A1P11836 297 aa17.45■□□□□ 0.38
SPTLC2-202ENST00000554365 GTF2A2P52657 109 aa17.45■□□□□ 0.38
SPTLC2-202ENST00000554365 CAP1Q01518 475 aa17.45■□□□□ 0.38
SPTLC2-202ENST00000554365 FBXO33Q7Z6M2 555 aa17.45■□□□□ 0.38
SPTLC2-202ENST00000554365 FTSJ3Q8IY81 847 aaKnown RBP17.45■□□□□ 0.38
SPTLC2-202ENST00000554365 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.45■□□□□ 0.38
SPTLC2-202ENST00000554365 TBC1D22AQ8WUA7 517 aa17.45■□□□□ 0.38
SPTLC2-202ENST00000554365 GCC1Q96CN9 775 aa17.45■□□□□ 0.38
SPTLC2-202ENST00000554365 ZFYVE28Q9HCC9 887 aa17.45■□□□□ 0.38
SPTLC2-202ENST00000554365 COG6Q9Y2V7 657 aa17.45■□□□□ 0.38
SPTLC2-202ENST00000554365 HTTP42858 3142 aa17.44■□□□□ 0.38
SPTLC2-202ENST00000554365 TEKT1Q969V4 418 aa17.44■□□□□ 0.38
SPTLC2-202ENST00000554365 ARMC5Q96C12 935 aa17.44■□□□□ 0.38
SPTLC2-202ENST00000554365 UTYO14607 1347 aa17.44■□□□□ 0.38
SPTLC2-202ENST00000554365 PDE8BO95263 885 aa17.43■□□□□ 0.38
SPTLC2-202ENST00000554365 EN2P19622 333 aaPredicted RBP17.43■□□□□ 0.38
SPTLC2-202ENST00000554365 HDLBPQ00341 1268 aaKnown RBP17.43■□□□□ 0.38
SPTLC2-202ENST00000554365 MVPQ14764 893 aaKnown RBP17.43■□□□□ 0.38
SPTLC2-202ENST00000554365 RABL6Q3YEC7 729 aaPredicted RBP17.43■□□□□ 0.38
SPTLC2-202ENST00000554365 FAM43AQ8N2R8 423 aa17.43■□□□□ 0.38
SPTLC2-202ENST00000554365 ANKRD44Q8N8A2 993 aa17.43■□□□□ 0.38
SPTLC2-202ENST00000554365 TMOD2Q9NZR1 351 aa17.43■□□□□ 0.38
SPTLC2-202ENST00000554365 BCAMP50895 628 aa17.42■□□□□ 0.38
SPTLC2-202ENST00000554365 ARHGEF6Q15052 776 aa17.42■□□□□ 0.38
SPTLC2-202ENST00000554365 EXOC6Q8TAG9 804 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms