RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 IRF6O14896 467 aa17.68■□□□□ 0.42
SNRPF-203ENST00000551316 TFRCP02786 760 aaKnown RBP17.68■□□□□ 0.42
SNRPF-203ENST00000551316 CDX2Q99626 313 aaPredicted RBP17.68■□□□□ 0.42
SNRPF-203ENST00000551316 JAG2Q9Y219 1238 aa17.68■□□□□ 0.42
SNRPF-203ENST00000551316 CCDC152Q4G0S7 254 aa17.67■□□□□ 0.42
SNRPF-203ENST00000551316 FAM109BQ6ICB4 259 aaPredicted RBP17.67■□□□□ 0.42
SNRPF-203ENST00000551316 ZBTB38Q8NAP3 1195 aaPredicted RBP17.67■□□□□ 0.42
SNRPF-203ENST00000551316 SLAIN1Q8ND83 568 aa17.67■□□□□ 0.42
SNRPF-203ENST00000551316 CFAP53Q96M91 514 aa17.67■□□□□ 0.42
SNRPF-203ENST00000551316 PLEKHF1Q96S99 279 aa17.67■□□□□ 0.42
SNRPF-203ENST00000551316 FRMPD3Q5JV73 1810 aa17.66■□□□□ 0.42
SNRPF-203ENST00000551316 SNAP23O00161 211 aa17.66■□□□□ 0.42
SNRPF-203ENST00000551316 NFE2L2Q16236 605 aa17.66■□□□□ 0.42
SNRPF-203ENST00000551316 TMEM39BQ9GZU3 492 aa17.66■□□□□ 0.42
SNRPF-203ENST00000551316 NUDCQ9Y266 331 aa17.66■□□□□ 0.42
SNRPF-203ENST00000551316 PTPRFP10586 1907 aa17.66■□□□□ 0.42
SNRPF-203ENST00000551316 TMEM265A0A087WTH1 108 aa17.65■□□□□ 0.42
SNRPF-203ENST00000551316 ADCY3O60266 1144 aa17.65■□□□□ 0.42
SNRPF-203ENST00000551316 CETPP11597 493 aa17.65■□□□□ 0.42
SNRPF-203ENST00000551316 MAP3K9P80192 1104 aa17.65■□□□□ 0.42
SNRPF-203ENST00000551316 NECAB2Q7Z6G3 386 aa17.65■□□□□ 0.42
SNRPF-203ENST00000551316 MYLIPQ8WY64 445 aa17.65■□□□□ 0.42
SNRPF-203ENST00000551316 ZCCHC17Q9NP64 241 aaKnown RBP17.65■□□□□ 0.42
SNRPF-203ENST00000551316 PLXNB2O15031 1838 aa17.65■□□□□ 0.42
SNRPF-203ENST00000551316 REV3LO60673 3130 aa17.65■□□□□ 0.42
SNRPF-203ENST00000551316 TNFRSF10AO00220 468 aa17.64■□□□□ 0.41
SNRPF-203ENST00000551316 MMP14P50281 582 aa17.64■□□□□ 0.41
SNRPF-203ENST00000551316 TRIM28Q13263 835 aaKnown RBP17.64■□□□□ 0.41
SNRPF-203ENST00000551316 MOGSQ13724 837 aa17.64■□□□□ 0.41
SNRPF-203ENST00000551316 USP38Q8NB14 1042 aa17.64■□□□□ 0.41
SNRPF-203ENST00000551316 ZKSCAN4Q969J2 545 aaPredicted RBP17.64■□□□□ 0.41
SNRPF-203ENST00000551316 PFASO15067 1338 aa17.64■□□□□ 0.41
SNRPF-203ENST00000551316 PDE8AO60658 829 aa17.63■□□□□ 0.41
SNRPF-203ENST00000551316 BCRP11274 1271 aa17.63■□□□□ 0.41
SNRPF-203ENST00000551316 MDM2Q00987 491 aaPredicted RBP17.63■□□□□ 0.41
SNRPF-203ENST00000551316 SPDYE2Q495Y8 402 aa17.63■□□□□ 0.41
SNRPF-203ENST00000551316 GREM2Q9H772 168 aa17.63■□□□□ 0.41
SNRPF-203ENST00000551316 ZNF70Q9UC06 446 aaPredicted RBP17.63■□□□□ 0.41
SNRPF-203ENST00000551316 HOXD10P28358 340 aa17.62■□□□□ 0.41
SNRPF-203ENST00000551316 FLT3LGP49771 235 aa17.62■□□□□ 0.41
SNRPF-203ENST00000551316 TDRD3Q9H7E2 651 aaKnown RBP17.62■□□□□ 0.41
SNRPF-203ENST00000551316 CD209Q9NNX6 404 aa17.62■□□□□ 0.41
SNRPF-203ENST00000551316 CSADQ9Y600 493 aa17.62■□□□□ 0.41
SNRPF-203ENST00000551316 NCOR1O75376 2440 aa17.62■□□□□ 0.41
SNRPF-203ENST00000551316 PDHXO00330 501 aa17.61■□□□□ 0.41
SNRPF-203ENST00000551316 PPP2R1AP30153 589 aa17.61■□□□□ 0.41
SNRPF-203ENST00000551316 SNAPC2Q13487 334 aa17.61■□□□□ 0.41
SNRPF-203ENST00000551316 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.61■□□□□ 0.41
SNRPF-203ENST00000551316 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.61■□□□□ 0.41
SNRPF-203ENST00000551316 BSDC1Q9NW68 430 aaPredicted RBP17.61■□□□□ 0.41
SNRPF-203ENST00000551316 TCP10L2B9ZVM9 353 aa17.6■□□□□ 0.41
SNRPF-203ENST00000551316 MYO1BO43795 1136 aa17.6■□□□□ 0.41
SNRPF-203ENST00000551316 PCCAP05165 728 aaPredicted RBP17.6■□□□□ 0.41
SNRPF-203ENST00000551316 CYP2C8P10632 490 aa17.6■□□□□ 0.41
SNRPF-203ENST00000551316 CTSWP56202 376 aa17.6■□□□□ 0.41
SNRPF-203ENST00000551316 MAP3K12Q12852 859 aa17.6■□□□□ 0.41
SNRPF-203ENST00000551316 PPIL2Q13356 520 aa17.6■□□□□ 0.41
SNRPF-203ENST00000551316 ZNF697Q5TEC3 545 aa17.6■□□□□ 0.41
SNRPF-203ENST00000551316 TTYH1Q9H313 450 aaPredicted RBP17.6■□□□□ 0.41
SNRPF-203ENST00000551316 FAM205AQ6ZU69 1335 aa17.6■□□□□ 0.41
SNRPF-203ENST00000551316 FCGRTP55899 365 aa17.59■□□□□ 0.41
SNRPF-203ENST00000551316 TRIM32Q13049 653 aa17.59■□□□□ 0.41
SNRPF-203ENST00000551316 ERO1BQ86YB8 467 aa17.59■□□□□ 0.41
SNRPF-203ENST00000551316 MYD88Q99836 296 aa17.59■□□□□ 0.41
SNRPF-203ENST00000551316 WDHD1O75717 1129 aaPredicted RBP17.58■□□□□ 0.4
SNRPF-203ENST00000551316 RBM5P52756 815 aaKnown RBP eCLIP17.58■□□□□ 0.4
SNRPF-203ENST00000551316 ANKRD23Q86SG2 305 aa17.58■□□□□ 0.4
SNRPF-203ENST00000551316 HELBQ8NG08 1087 aaPredicted RBP17.58■□□□□ 0.4
SNRPF-203ENST00000551316 WRNIP1Q96S55 665 aa17.58■□□□□ 0.4
SNRPF-203ENST00000551316 PHIPQ8WWQ0 1821 aa17.57■□□□□ 0.4
SNRPF-203ENST00000551316 XIRP2A4UGR9 3374 aa17.57■□□□□ 0.4
SNRPF-203ENST00000551316 CACNB3P54284 484 aa17.57■□□□□ 0.4
SNRPF-203ENST00000551316 HDGFL1Q5TGJ6 251 aa17.57■□□□□ 0.4
SNRPF-203ENST00000551316 TTLL11Q8NHH1 800 aa17.57■□□□□ 0.4
SNRPF-203ENST00000551316 SYMPKQ92797 1274 aaKnown RBP17.57■□□□□ 0.4
SNRPF-203ENST00000551316 CDC5LQ99459 802 aaKnown RBP17.57■□□□□ 0.4
SNRPF-203ENST00000551316 LEMD3Q9Y2U8 911 aa17.57■□□□□ 0.4
SNRPF-203ENST00000551316 TJAP1Q5JTD0 557 aa17.56■□□□□ 0.4
SNRPF-203ENST00000551316 SEMA6BQ9H3T3 888 aa17.56■□□□□ 0.4
SNRPF-203ENST00000551316 C11orf49Q9H6J7 331 aa17.56■□□□□ 0.4
SNRPF-203ENST00000551316 PHAXQ9H814 394 aaKnown RBP17.56■□□□□ 0.4
SNRPF-203ENST00000551316 PIEZO1Q92508 2521 aa17.56■□□□□ 0.4
SNRPF-203ENST00000551316 INPP5BP32019 993 aa17.55■□□□□ 0.4
SNRPF-203ENST00000551316 GPAT2Q6NUI2 795 aa17.55■□□□□ 0.4
SNRPF-203ENST00000551316 PXYLP1Q8TE99 480 aa17.55■□□□□ 0.4
SNRPF-203ENST00000551316 NBPF3Q9H094 633 aa17.55■□□□□ 0.4
SNRPF-203ENST00000551316 TAOK2Q9UL54 1235 aa17.55■□□□□ 0.4
SNRPF-203ENST00000551316 TNFAIP1Q13829 316 aa17.54■□□□□ 0.4
SNRPF-203ENST00000551316 LRRC26Q2I0M4 334 aa17.54■□□□□ 0.4
SNRPF-203ENST00000551316 ANKLE1Q8NAG6 615 aa17.54■□□□□ 0.4
SNRPF-203ENST00000551316 CHD9Q3L8U1 2897 aa17.54■□□□□ 0.4
SNRPF-203ENST00000551316 FOSL2P15408 326 aa17.53■□□□□ 0.4
SNRPF-203ENST00000551316 IRF5Q13568 498 aa17.53■□□□□ 0.4
SNRPF-203ENST00000551316 GRIK5Q16478 980 aa17.53■□□□□ 0.4
SNRPF-203ENST00000551316 RIC3Q7Z5B4 369 aa17.52■□□□□ 0.4
SNRPF-203ENST00000551316 CWC25Q9NXE8 425 aaPredicted RBP17.52■□□□□ 0.4
SNRPF-203ENST00000551316 TIMELESSQ9UNS1 1208 aa17.52■□□□□ 0.4
SNRPF-203ENST00000551316 KCNH4Q9UQ05 1017 aa17.52■□□□□ 0.4
SNRPF-203ENST00000551316 SYNGAP1Q96PV0 1343 aa17.51■□□□□ 0.39
SNRPF-203ENST00000551316 TAF5LO75529 589 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms