RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 DEFB132Q7Z7B7 95 aa23.39■■□□□ 1.33
SSH1-209ENST00000551165 PDGFDQ9GZP0 370 aaPredicted RBP23.39■■□□□ 1.33
SSH1-209ENST00000551165 ZNF213O14771 459 aa23.38■■□□□ 1.33
SSH1-209ENST00000551165 BRF1Q92994 677 aa23.38■■□□□ 1.33
SSH1-209ENST00000551165 CRAMP1Q96RY5 1269 aa23.38■■□□□ 1.33
SSH1-209ENST00000551165 SH2B1Q9NRF2 756 aaPredicted RBP23.38■■□□□ 1.33
SSH1-209ENST00000551165 GSG1L2A8MUP6 293 aa23.38■■□□□ 1.33
SSH1-209ENST00000551165 GPHNQ9NQX3 736 aaPredicted RBP23.38■■□□□ 1.33
SSH1-209ENST00000551165 PARP3Q9Y6F1 533 aa23.38■■□□□ 1.33
SSH1-209ENST00000551165 MYH13Q9UKX3 1938 aa23.38■■□□□ 1.33
SSH1-209ENST00000551165 BBOX1O75936 387 aa23.37■■□□□ 1.33
SSH1-209ENST00000551165 UFL1O94874 794 aa23.37■■□□□ 1.33
SSH1-209ENST00000551165 SRGNP10124 158 aa23.37■■□□□ 1.33
SSH1-209ENST00000551165 PRDX5P30044 214 aa23.37■■□□□ 1.33
SSH1-209ENST00000551165 ANKRD1Q15327 319 aa23.37■■□□□ 1.33
SSH1-209ENST00000551165 TBC1D10CQ8IV04 446 aa23.37■■□□□ 1.33
SSH1-209ENST00000551165 INCENPQ9NQS7 918 aa23.37■■□□□ 1.33
SSH1-209ENST00000551165 PATL2C9JE40 543 aaKnown RBP23.37■■□□□ 1.33
SSH1-209ENST00000551165 SEMA3EO15041 775 aa23.37■■□□□ 1.33
SSH1-209ENST00000551165 IFNL3Q8IZI9 196 aa23.37■■□□□ 1.33
SSH1-209ENST00000551165 POLLQ9UGP5 575 aa23.37■■□□□ 1.33
SSH1-209ENST00000551165 DYNLL1P63167 89 aaKnown RBP23.36■■□□□ 1.33
SSH1-209ENST00000551165 BAG4O95429 457 aaKnown RBP23.36■■□□□ 1.33
SSH1-209ENST00000551165 HMGB1P09429 215 aaKnown RBP23.36■■□□□ 1.33
SSH1-209ENST00000551165 SLC4A4Q9Y6R1 1079 aa23.36■■□□□ 1.33
SSH1-209ENST00000551165 BRD1O95696 1058 aa23.35■■□□□ 1.33
SSH1-209ENST00000551165 MECOMQ03112 1051 aa23.35■■□□□ 1.33
SSH1-209ENST00000551165 SMC3Q9UQE7 1217 aa23.35■■□□□ 1.33
SSH1-209ENST00000551165 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.35■■□□□ 1.33
SSH1-209ENST00000551165 TACC3Q9Y6A5 838 aa23.35■■□□□ 1.33
SSH1-209ENST00000551165 APOBRQ0VD83 1088 aa23.35■■□□□ 1.33
SSH1-209ENST00000551165 SDR42E1Q8WUS8 393 aa23.35■■□□□ 1.33
SSH1-209ENST00000551165 NSUN4Q96CB9 384 aaKnown RBP23.35■■□□□ 1.33
SSH1-209ENST00000551165 PPEF1O14829 653 aaPredicted RBP23.34■■□□□ 1.33
SSH1-209ENST00000551165 GJB2P29033 226 aa23.34■■□□□ 1.33
SSH1-209ENST00000551165 FGD1P98174 961 aa23.34■■□□□ 1.33
SSH1-209ENST00000551165 RIOK1Q9BRS2 568 aaKnown RBP23.34■■□□□ 1.33
SSH1-209ENST00000551165 GGA1Q9UJY5 639 aa23.34■■□□□ 1.33
SSH1-209ENST00000551165 COL11A2P13942 1736 aaPredicted RBP23.34■■□□□ 1.33
SSH1-209ENST00000551165 ANTXR2P58335 489 aa23.34■■□□□ 1.33
SSH1-209ENST00000551165 GRIK5Q16478 980 aa23.34■■□□□ 1.33
SSH1-209ENST00000551165 NAA16Q6N069 864 aaPredicted RBP23.34■■□□□ 1.33
SSH1-209ENST00000551165 MB21D2Q8IYB1 491 aaPredicted RBP23.34■■□□□ 1.33
SSH1-209ENST00000551165 TDRD7Q8NHU6 1098 aaKnown RBP23.34■■□□□ 1.33
SSH1-209ENST00000551165 TBC1D16Q8TBP0 767 aa23.34■■□□□ 1.33
SSH1-209ENST00000551165 GBP4Q96PP9 640 aa23.34■■□□□ 1.33
SSH1-209ENST00000551165 MAGEB6P1A0A0J9YX57 407 aa23.33■■□□□ 1.33
SSH1-209ENST00000551165 CLEC17AQ6ZS10 378 aa23.33■■□□□ 1.33
SSH1-209ENST00000551165 PDS5AQ29RF7 1337 aaKnown RBP23.33■■□□□ 1.33
SSH1-209ENST00000551165 SMIM22K7EJ46 135 aa23.33■■□□□ 1.32
SSH1-209ENST00000551165 CTDSPL2Q05D32 466 aa23.33■■□□□ 1.32
SSH1-209ENST00000551165 ALX1Q15699 326 aa23.33■■□□□ 1.32
SSH1-209ENST00000551165 AGXT2Q9BYV1 514 aa23.33■■□□□ 1.32
SSH1-209ENST00000551165 NAPBQ9H115 298 aa23.33■■□□□ 1.32
SSH1-209ENST00000551165 STK32BQ9NY57 414 aa23.33■■□□□ 1.32
SSH1-209ENST00000551165 ATP2B4P23634 1241 aa23.32■■□□□ 1.32
SSH1-209ENST00000551165 C15orf52Q6ZUT6 534 aaKnown RBP23.32■■□□□ 1.32
SSH1-209ENST00000551165 PODXL2Q9NZ53 605 aa23.32■■□□□ 1.32
SSH1-209ENST00000551165 SYT1P21579 422 aa23.31■■□□□ 1.32
SSH1-209ENST00000551165 STK11IPQ8N1F8 1099 aa23.31■■□□□ 1.32
SSH1-209ENST00000551165 NCOA7Q8NI08 942 aa23.31■■□□□ 1.32
SSH1-209ENST00000551165 C6orf229H3BNL8 230 aa23.3■■□□□ 1.32
SSH1-209ENST00000551165 NPR1P16066 1061 aa23.3■■□□□ 1.32
SSH1-209ENST00000551165 ZNF804AQ7Z570 1209 aa23.3■■□□□ 1.32
SSH1-209ENST00000551165 SP8Q8IXZ3 490 aa23.3■■□□□ 1.32
SSH1-209ENST00000551165 CD209Q9NNX6 404 aa23.3■■□□□ 1.32
SSH1-209ENST00000551165 NEDD4P46934 1319 aa23.3■■□□□ 1.32
SSH1-209ENST00000551165 LRRC37AA6NMS7 1700 aa23.3■■□□□ 1.32
SSH1-209ENST00000551165 LTBP1Q14766 1721 aa23.3■■□□□ 1.32
SSH1-209ENST00000551165 PRC1O43663 620 aa23.3■■□□□ 1.32
SSH1-209ENST00000551165 PDE6BP35913 854 aa23.3■■□□□ 1.32
SSH1-209ENST00000551165 SCRN1Q12765 414 aa23.3■■□□□ 1.32
SSH1-209ENST00000551165 FOXD4L6Q3SYB3 417 aaPredicted RBP23.3■■□□□ 1.32
SSH1-209ENST00000551165 MCTP1Q6DN14 999 aa23.3■■□□□ 1.32
SSH1-209ENST00000551165 FOXD4L3Q6VB84 417 aaPredicted RBP23.3■■□□□ 1.32
SSH1-209ENST00000551165 CYB5R4Q7L1T6 521 aa23.3■■□□□ 1.32
SSH1-209ENST00000551165 GTF3C6Q969F1 213 aa23.3■■□□□ 1.32
SSH1-209ENST00000551165 ATP6V0A2Q9Y487 856 aa23.3■■□□□ 1.32
SSH1-209ENST00000551165 TDO2P48775 406 aa23.29■■□□□ 1.32
SSH1-209ENST00000551165 B4E1Z4 1266 aa23.29■■□□□ 1.32
SSH1-209ENST00000551165 JAK2O60674 1132 aa23.29■■□□□ 1.32
SSH1-209ENST00000551165 GNAT2P19087 354 aa23.29■■□□□ 1.32
SSH1-209ENST00000551165 DDX11L8A8MPP1 907 aa23.28■■□□□ 1.32
SSH1-209ENST00000551165 RALYLQ86SE5 291 aaKnown RBP23.28■■□□□ 1.32
SSH1-209ENST00000551165 ZNF622Q969S3 477 aaKnown RBP eCLIP23.28■■□□□ 1.32
SSH1-209ENST00000551165 AATFQ9NY61 560 aaKnown RBP eCLIP23.28■■□□□ 1.32
SSH1-209ENST00000551165 RIMBP2O15034 1052 aa23.28■■□□□ 1.32
SSH1-209ENST00000551165 MCM5P33992 734 aa23.28■■□□□ 1.32
SSH1-209ENST00000551165 NCOA5Q9HCD5 579 aaKnown RBP23.28■■□□□ 1.32
SSH1-209ENST00000551165 NAP1L2Q9ULW6 460 aaPredicted RBP23.28■■□□□ 1.32
SSH1-209ENST00000551165 ZMYM6O95789 1325 aa23.28■■□□□ 1.32
SSH1-209ENST00000551165 TRAK2O60296 914 aa23.27■■□□□ 1.32
SSH1-209ENST00000551165 CCT2P78371 535 aaKnown RBP23.27■■□□□ 1.32
SSH1-209ENST00000551165 MASTLQ96GX5 879 aa23.27■■□□□ 1.32
SSH1-209ENST00000551165 STX6O43752 255 aa23.27■■□□□ 1.32
SSH1-209ENST00000551165 PPFIA3O75145 1194 aa23.27■■□□□ 1.32
SSH1-209ENST00000551165 CHRNA5P30532 468 aa23.27■■□□□ 1.32
SSH1-209ENST00000551165 BRPF3Q9ULD4 1205 aa23.27■■□□□ 1.32
SSH1-209ENST00000551165 CYP2D7A0A087X1C5 515 aa23.26■■□□□ 1.31
SSH1-209ENST00000551165 PDIA3P30101 505 aaKnown RBP23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms