RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 CAMSAP1Q5T5Y3 1602 aa7.78□□□□□ -1.16
CPSF6-206ENST00000550987 ADAMTS12P58397 1594 aa7.77□□□□□ -1.17
CPSF6-206ENST00000550987 FAM177BA6PVY3 158 aa7.77□□□□□ -1.17
CPSF6-206ENST00000550987 METTL12A8MUP2 240 aa7.77□□□□□ -1.17
CPSF6-206ENST00000550987 NRG2O14511 850 aaPredicted RBP7.77□□□□□ -1.17
CPSF6-206ENST00000550987 PF4P02776 101 aa7.77□□□□□ -1.17
CPSF6-206ENST00000550987 CELA3AP09093 270 aa7.77□□□□□ -1.17
CPSF6-206ENST00000550987 FGFR3P22607 806 aa7.77□□□□□ -1.17
CPSF6-206ENST00000550987 LIG3P49916 1009 aa7.77□□□□□ -1.17
CPSF6-206ENST00000550987 PPP2R3AQ06190 1150 aa7.77□□□□□ -1.17
CPSF6-206ENST00000550987 NFX1Q12986 1120 aaKnown RBP7.77□□□□□ -1.17
CPSF6-206ENST00000550987 TTBK2Q6IQ55 1244 aa7.77□□□□□ -1.17
CPSF6-206ENST00000550987 CRIPAKQ8N1N5 446 aa7.77□□□□□ -1.17
CPSF6-206ENST00000550987 TMEM102Q8N9M5 508 aaPredicted RBP7.77□□□□□ -1.17
CPSF6-206ENST00000550987 GOLM1Q8NBJ4 401 aa7.77□□□□□ -1.17
CPSF6-206ENST00000550987 CNTNAP3BQ96NU0 1288 aa7.77□□□□□ -1.17
CPSF6-206ENST00000550987 CNTNAP3Q9BZ76 1288 aa7.77□□□□□ -1.17
CPSF6-206ENST00000550987 TLR6Q9Y2C9 796 aa7.77□□□□□ -1.17
CPSF6-206ENST00000550987 R3HCC1Q9Y3T6 440 aaKnown RBP7.77□□□□□ -1.17
CPSF6-206ENST00000550987 SAMM50Q9Y512 469 aa7.77□□□□□ -1.17
CPSF6-206ENST00000550987 POGZQ7Z3K3 1410 aa7.77□□□□□ -1.17
CPSF6-206ENST00000550987 FANCAO15360 1455 aa7.76□□□□□ -1.17
CPSF6-206ENST00000550987 ST8SIA5O15466 376 aa7.76□□□□□ -1.17
CPSF6-206ENST00000550987 SMNDC1O75940 238 aaKnown RBP eCLIP7.76□□□□□ -1.17
CPSF6-206ENST00000550987 NCLP19338 710 aaKnown RBP7.76□□□□□ -1.17
CPSF6-206ENST00000550987 ZNF157P51786 506 aaPredicted RBP7.76□□□□□ -1.17
CPSF6-206ENST00000550987 MAP3K10Q02779 954 aa7.76□□□□□ -1.17
CPSF6-206ENST00000550987 APOBRQ0VD83 1088 aa7.76□□□□□ -1.17
CPSF6-206ENST00000550987 CAMK2GQ13555 558 aaPredicted RBP7.76□□□□□ -1.17
CPSF6-206ENST00000550987 UBAP2LQ14157 1087 aaKnown RBP7.76□□□□□ -1.17
CPSF6-206ENST00000550987 FBXL19Q6PCT2 694 aa7.76□□□□□ -1.17
CPSF6-206ENST00000550987 PHC3Q8NDX5 983 aa7.76□□□□□ -1.17
CPSF6-206ENST00000550987 EAF1Q96JC9 268 aaPredicted RBP7.76□□□□□ -1.17
CPSF6-206ENST00000550987 NT5C1AQ9BXI3 368 aa7.76□□□□□ -1.17
CPSF6-206ENST00000550987 PBX4Q9BYU1 374 aa7.76□□□□□ -1.17
CPSF6-206ENST00000550987 UBE2OQ9C0C9 1292 aaKnown RBP7.76□□□□□ -1.17
CPSF6-206ENST00000550987 OSBPL2Q9H1P3 480 aa7.76□□□□□ -1.17
CPSF6-206ENST00000550987 SENP2Q9HC62 589 aa7.76□□□□□ -1.17
CPSF6-206ENST00000550987 SEC31BQ9NQW1 1179 aa7.76□□□□□ -1.17
CPSF6-206ENST00000550987 GINM1Q9NU53 330 aa7.76□□□□□ -1.17
CPSF6-206ENST00000550987 NDFIP2Q9NV92 336 aa7.76□□□□□ -1.17
CPSF6-206ENST00000550987 SETD1BQ9UPS6 1966 aaKnown RBP7.75□□□□□ -1.17
CPSF6-206ENST00000550987 TLDC2A0PJX2 215 aa7.75□□□□□ -1.17
CPSF6-206ENST00000550987 U2SURPO15042 1029 aaKnown RBP7.75□□□□□ -1.17
CPSF6-206ENST00000550987 HOXD8P13378 290 aaPredicted RBP7.75□□□□□ -1.17
CPSF6-206ENST00000550987 EIF2AK2P19525 551 aaKnown RBP7.75□□□□□ -1.17
CPSF6-206ENST00000550987 ITPKAP23677 461 aa7.75□□□□□ -1.17
CPSF6-206ENST00000550987 COL9A2Q14055 689 aaPredicted RBP7.75□□□□□ -1.17
CPSF6-206ENST00000550987 CEP135Q66GS9 1140 aa7.75□□□□□ -1.17
CPSF6-206ENST00000550987 TRPM4Q8TD43 1214 aa7.75□□□□□ -1.17
CPSF6-206ENST00000550987 NKD1Q969G9 470 aa7.75□□□□□ -1.17
CPSF6-206ENST00000550987 KIFC2Q96AC6 838 aa7.75□□□□□ -1.17
CPSF6-206ENST00000550987 NECAB3Q96P71 396 aaPredicted RBP7.75□□□□□ -1.17
CPSF6-206ENST00000550987 HHIPQ96QV1 700 aa7.75□□□□□ -1.17
CPSF6-206ENST00000550987 BHLHE41Q9C0J9 482 aaPredicted RBP7.75□□□□□ -1.17
CPSF6-206ENST00000550987 RASSF4Q9H2L5 321 aa7.75□□□□□ -1.17
CPSF6-206ENST00000550987 MRVI1Q9Y6F6 885 aa7.75□□□□□ -1.17
CPSF6-206ENST00000550987 RGS12O14924 1447 aa7.75□□□□□ -1.17
CPSF6-206ENST00000550987 FRMPD1Q5SYB0 1578 aa7.75□□□□□ -1.17
CPSF6-206ENST00000550987 CDC14CA4D256 554 aa7.74□□□□□ -1.17
CPSF6-206ENST00000550987 ITGA6P23229 1130 aa7.74□□□□□ -1.17
CPSF6-206ENST00000550987 RXRBP28702 533 aa7.74□□□□□ -1.17
CPSF6-206ENST00000550987 CEBPAP49715 358 aaPredicted RBP7.74□□□□□ -1.17
CPSF6-206ENST00000550987 GPLD1P80108 840 aa7.74□□□□□ -1.17
CPSF6-206ENST00000550987 LMNB2Q03252 620 aa7.74□□□□□ -1.17
CPSF6-206ENST00000550987 BMS1Q14692 1282 aaKnown RBP7.74□□□□□ -1.17
CPSF6-206ENST00000550987 NFE2L2Q16236 605 aa7.74□□□□□ -1.17
CPSF6-206ENST00000550987 RPS26P11Q5JNZ5 115 aaPredicted RBP7.74□□□□□ -1.17
CPSF6-206ENST00000550987 JARID2Q92833 1246 aaPredicted RBP7.74□□□□□ -1.17
CPSF6-206ENST00000550987 ZNF837Q96EG3 531 aaPredicted RBP7.74□□□□□ -1.17
CPSF6-206ENST00000550987 MRFAP1L1Q96HT8 127 aa7.74□□□□□ -1.17
CPSF6-206ENST00000550987 TRIM55Q9BYV6 548 aa7.74□□□□□ -1.17
CPSF6-206ENST00000550987 AAASQ9NRG9 546 aa7.74□□□□□ -1.17
CPSF6-206ENST00000550987 TMEM39AQ9NV64 488 aa7.74□□□□□ -1.17
CPSF6-206ENST00000550987 DNAJB12Q9NXW2 375 aaKnown RBP7.74□□□□□ -1.17
CPSF6-206ENST00000550987 UBP1Q9NZI7 540 aa7.74□□□□□ -1.17
CPSF6-206ENST00000550987 STRIP2Q9ULQ0 834 aa7.74□□□□□ -1.17
CPSF6-206ENST00000550987 CD109Q6YHK3 1445 aa7.73□□□□□ -1.17
CPSF6-206ENST00000550987 ZBTB42B2RXF5 422 aa7.73□□□□□ -1.17
CPSF6-206ENST00000550987 NFKBIEO00221 500 aa7.73□□□□□ -1.17
CPSF6-206ENST00000550987 ENC1O14682 589 aa7.73□□□□□ -1.17
CPSF6-206ENST00000550987 PPM1GO15355 546 aaPredicted RBP7.73□□□□□ -1.17
CPSF6-206ENST00000550987 ATP11AP98196 1134 aa7.73□□□□□ -1.17
CPSF6-206ENST00000550987 CTBSQ01459 385 aa7.73□□□□□ -1.17
CPSF6-206ENST00000550987 FAM182BQ5T319 152 aa7.73□□□□□ -1.17
CPSF6-206ENST00000550987 ZNF772Q68DY9 489 aaPredicted RBP7.73□□□□□ -1.17
CPSF6-206ENST00000550987 AGMOQ6ZNB7 445 aa7.73□□□□□ -1.17
CPSF6-206ENST00000550987 SYT9Q86SS6 491 aa7.73□□□□□ -1.17
CPSF6-206ENST00000550987 BSNDQ8WZ55 320 aa7.73□□□□□ -1.17
CPSF6-206ENST00000550987 ANAPC16Q96DE5 110 aa7.73□□□□□ -1.17
CPSF6-206ENST00000550987 ZNF576Q9H609 170 aa7.73□□□□□ -1.17
CPSF6-206ENST00000550987 RNF17Q9BXT8 1623 aaKnown RBP7.73□□□□□ -1.17
CPSF6-206ENST00000550987 EP400Q96L91 3159 aa7.72□□□□□ -1.17
CPSF6-206ENST00000550987 BMP4P12644 408 aa7.72□□□□□ -1.17
CPSF6-206ENST00000550987 CPB1P15086 417 aa7.72□□□□□ -1.17
CPSF6-206ENST00000550987 MCM4P33991 863 aa7.72□□□□□ -1.17
CPSF6-206ENST00000550987 RPS26P62854 115 aaKnown RBP7.72□□□□□ -1.17
CPSF6-206ENST00000550987 FBXW10Q5XX13 1052 aa7.72□□□□□ -1.17
CPSF6-206ENST00000550987 PCNX4Q63HM2 1172 aa7.72□□□□□ -1.17
CPSF6-206ENST00000550987 ANKS3Q6ZW76 656 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms