RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 PRR20EP86478 221 aa8.68□□□□□ -1.02
TGFBR1-208ENST00000550253 PRR20CP86479 221 aa8.68□□□□□ -1.02
TGFBR1-208ENST00000550253 PRR20DP86480 221 aa8.68□□□□□ -1.02
TGFBR1-208ENST00000550253 PRR20BP86481 221 aa8.68□□□□□ -1.02
TGFBR1-208ENST00000550253 PRR20AP86496 221 aa8.68□□□□□ -1.02
TGFBR1-208ENST00000550253 CHMP4AQ9BY43 222 aa8.68□□□□□ -1.02
TGFBR1-208ENST00000550253 hCG_2014768A0A024R1R8 64 aa8.67□□□□□ -1.02
TGFBR1-208ENST00000550253 HOXD8P13378 290 aaPredicted RBP8.67□□□□□ -1.02
TGFBR1-208ENST00000550253 PLEKHG4Q58EX7 1191 aa8.67□□□□□ -1.02
TGFBR1-208ENST00000550253 RNF187Q5TA31 235 aaPredicted RBP8.67□□□□□ -1.02
TGFBR1-208ENST00000550253 TTBK2Q6IQ55 1244 aa8.67□□□□□ -1.02
TGFBR1-208ENST00000550253 NCAPG2Q86XI2 1143 aa8.67□□□□□ -1.02
TGFBR1-208ENST00000550253 CEP120Q8N960 986 aa8.67□□□□□ -1.02
TGFBR1-208ENST00000550253 SEC31BQ9NQW1 1179 aa8.67□□□□□ -1.02
TGFBR1-208ENST00000550253 TLR7Q9NYK1 1049 aaKnown RBP8.67□□□□□ -1.02
TGFBR1-208ENST00000550253 MSRB2Q9Y3D2 182 aa8.67□□□□□ -1.02
TGFBR1-208ENST00000550253 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.67□□□□□ -1.02
TGFBR1-208ENST00000550253 PHLDB1Q86UU1 1377 aa8.67□□□□□ -1.02
TGFBR1-208ENST00000550253 ROBO2Q9HCK4 1378 aa8.67□□□□□ -1.02
TGFBR1-208ENST00000550253 FHOD3Q2V2M9 1422 aa8.66□□□□□ -1.02
TGFBR1-208ENST00000550253 FIGNL2A6NMB9 653 aa8.66□□□□□ -1.02
TGFBR1-208ENST00000550253 SMAD7O15105 426 aaKnown RBP8.66□□□□□ -1.02
TGFBR1-208ENST00000550253 TRPA1O75762 1119 aa8.66□□□□□ -1.02
TGFBR1-208ENST00000550253 RPS26P62854 115 aaKnown RBP8.66□□□□□ -1.02
TGFBR1-208ENST00000550253 SPRED3Q2MJR0 410 aa8.66□□□□□ -1.02
TGFBR1-208ENST00000550253 TRIM42Q8IWZ5 723 aa8.66□□□□□ -1.02
TGFBR1-208ENST00000550253 PPT2Q9UMR5 302 aa8.66□□□□□ -1.02
TGFBR1-208ENST00000550253 METTL12A8MUP2 240 aa8.65□□□□□ -1.02
TGFBR1-208ENST00000550253 NFKBIEO00221 500 aa8.65□□□□□ -1.02
TGFBR1-208ENST00000550253 PAGE1O75459 146 aa8.65□□□□□ -1.02
TGFBR1-208ENST00000550253 THBS1P07996 1170 aa8.65□□□□□ -1.02
TGFBR1-208ENST00000550253 HSPA2P54652 639 aa8.65□□□□□ -1.02
TGFBR1-208ENST00000550253 HYAL2Q12891 473 aa8.65□□□□□ -1.02
TGFBR1-208ENST00000550253 CCDC81Q6ZN84 652 aa8.65□□□□□ -1.02
TGFBR1-208ENST00000550253 FAM169BQ8N8A8 192 aa8.65□□□□□ -1.02
TGFBR1-208ENST00000550253 LRRC3Q9BY71 257 aa8.65□□□□□ -1.02
TGFBR1-208ENST00000550253 BHLHE41Q9C0J9 482 aaPredicted RBP8.65□□□□□ -1.02
TGFBR1-208ENST00000550253 CCDC113Q9H0I3 377 aa8.65□□□□□ -1.02
TGFBR1-208ENST00000550253 IFT57Q9NWB7 429 aa8.65□□□□□ -1.02
TGFBR1-208ENST00000550253 NOP58Q9Y2X3 529 aaKnown RBP8.65□□□□□ -1.02
TGFBR1-208ENST00000550253 R3HCC1Q9Y3T6 440 aaKnown RBP8.65□□□□□ -1.02
TGFBR1-208ENST00000550253 FER1L4A9Z1Z3 1794 aa8.65□□□□□ -1.03
TGFBR1-208ENST00000550253 YEATS2Q9ULM3 1422 aa8.65□□□□□ -1.03
TGFBR1-208ENST00000550253 ZMYM4Q5VZL5 1548 aa8.65□□□□□ -1.03
TGFBR1-208ENST00000550253 ATXN7O15265 892 aaPredicted RBP8.64□□□□□ -1.03
TGFBR1-208ENST00000550253 PSAPP07602 524 aa8.64□□□□□ -1.03
TGFBR1-208ENST00000550253 IBSPP21815 317 aaPredicted RBP8.64□□□□□ -1.03
TGFBR1-208ENST00000550253 FAAP100Q0VG06 881 aa8.64□□□□□ -1.03
TGFBR1-208ENST00000550253 SEZ6Q53EL9 994 aa8.64□□□□□ -1.03
TGFBR1-208ENST00000550253 TNNI3KQ59H18 835 aa8.64□□□□□ -1.03
TGFBR1-208ENST00000550253 EFHC2Q5JST6 749 aa8.64□□□□□ -1.03
TGFBR1-208ENST00000550253 SPNS2Q8IVW8 549 aa8.64□□□□□ -1.03
TGFBR1-208ENST00000550253 CELF2-AS1Q8N7Q2 184 aa8.64□□□□□ -1.03
TGFBR1-208ENST00000550253 HHIPQ96QV1 700 aa8.64□□□□□ -1.03
TGFBR1-208ENST00000550253 GAS2L1Q99501 681 aaPredicted RBP8.64□□□□□ -1.03
TGFBR1-208ENST00000550253 KANSL2Q9H9L4 492 aa8.64□□□□□ -1.03
TGFBR1-208ENST00000550253 STRN4Q9NRL3 753 aa8.64□□□□□ -1.03
TGFBR1-208ENST00000550253 AKNAQ7Z591 1439 aa8.64□□□□□ -1.03
TGFBR1-208ENST00000550253 HECW1Q76N89 1606 aa8.64□□□□□ -1.03
TGFBR1-208ENST00000550253 A0A0G2JS52 829 aa8.64□□□□□ -1.03
TGFBR1-208ENST00000550253 MAP3K6O95382 1288 aa8.64□□□□□ -1.03
TGFBR1-208ENST00000550253 NFKB1P19838 968 aa8.64□□□□□ -1.03
TGFBR1-208ENST00000550253 GIPRP48546 466 aa8.64□□□□□ -1.03
TGFBR1-208ENST00000550253 UBAP2LQ14157 1087 aaKnown RBP8.64□□□□□ -1.03
TGFBR1-208ENST00000550253 LBRQ14739 615 aaKnown RBP8.64□□□□□ -1.03
TGFBR1-208ENST00000550253 RPS26P11Q5JNZ5 115 aaPredicted RBP8.64□□□□□ -1.03
TGFBR1-208ENST00000550253 BNC2Q6ZN30 1099 aaPredicted RBP8.64□□□□□ -1.03
TGFBR1-208ENST00000550253 FILIP1Q7Z7B0 1213 aa8.64□□□□□ -1.03
TGFBR1-208ENST00000550253 CCDC84Q86UT8 332 aaPredicted RBP8.64□□□□□ -1.03
TGFBR1-208ENST00000550253 LILRB2Q8N423 598 aa8.64□□□□□ -1.03
TGFBR1-208ENST00000550253 TMEM102Q8N9M5 508 aaPredicted RBP8.64□□□□□ -1.03
TGFBR1-208ENST00000550253 FBXO27Q8NI29 283 aa8.64□□□□□ -1.03
TGFBR1-208ENST00000550253 ZCRB1Q8TBF4 217 aaKnown RBP8.64□□□□□ -1.03
TGFBR1-208ENST00000550253 MICAL1Q8TDZ2 1067 aa8.64□□□□□ -1.03
TGFBR1-208ENST00000550253 NXPE3Q969Y0 559 aa8.64□□□□□ -1.03
TGFBR1-208ENST00000550253 HCN2Q9UL51 889 aa8.64□□□□□ -1.03
TGFBR1-208ENST00000550253 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.64□□□□□ -1.03
TGFBR1-208ENST00000550253 ARID4BQ4LE39 1312 aaPredicted RBP8.63□□□□□ -1.03
TGFBR1-208ENST00000550253 CFAP74Q9C0B2 1584 aa8.63□□□□□ -1.03
TGFBR1-208ENST00000550253 FANCAO15360 1455 aa8.63□□□□□ -1.03
TGFBR1-208ENST00000550253 DENND4BO75064 1496 aaPredicted RBP8.63□□□□□ -1.03
TGFBR1-208ENST00000550253 A0A096LPE4 126 aa8.63□□□□□ -1.03
TGFBR1-208ENST00000550253 A0A1W2PPZ6 126 aa8.63□□□□□ -1.03
TGFBR1-208ENST00000550253 MARCH6O60337 910 aa8.63□□□□□ -1.03
TGFBR1-208ENST00000550253 F13A1P00488 732 aa8.63□□□□□ -1.03
TGFBR1-208ENST00000550253 PLAURQ03405 335 aa8.63□□□□□ -1.03
TGFBR1-208ENST00000550253 TNP2Q05952 138 aa8.63□□□□□ -1.03
TGFBR1-208ENST00000550253 FIGNL1Q6PIW4 674 aa8.63□□□□□ -1.03
TGFBR1-208ENST00000550253 SH3TC2Q8TF17 1288 aa8.63□□□□□ -1.03
TGFBR1-208ENST00000550253 ZNF576Q9H609 170 aa8.63□□□□□ -1.03
TGFBR1-208ENST00000550253 EFCC1Q9HA90 598 aa8.63□□□□□ -1.03
TGFBR1-208ENST00000550253 PCDHGC4Q9Y5F7 938 aa8.63□□□□□ -1.03
TGFBR1-208ENST00000550253 COL4A3BPQ9Y5P4 624 aa8.63□□□□□ -1.03
TGFBR1-208ENST00000550253 ZFYVE16Q7Z3T8 1539 aa8.63□□□□□ -1.03
TGFBR1-208ENST00000550253 SENP3-EIF4A1A0A087X0R7 540 aa8.62□□□□□ -1.03
TGFBR1-208ENST00000550253 CCDC85CA6NKD9 419 aa8.62□□□□□ -1.03
TGFBR1-208ENST00000550253 EIF6P56537 245 aaKnown RBP8.62□□□□□ -1.03
TGFBR1-208ENST00000550253 CHMP4BP1P59074 171 aa8.62□□□□□ -1.03
TGFBR1-208ENST00000550253 LAMC2Q13753 1193 aa8.62□□□□□ -1.03
TGFBR1-208ENST00000550253 GATAD2BQ8WXI9 593 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms