RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 CTCFLQ8NI51 663 aaPredicted RBP5.88□□□□□ -1.47
UBE4A-203ENST00000545354 BICD2Q8TD16 824 aa5.88□□□□□ -1.47
UBE4A-203ENST00000545354 EPSTI1Q96J88 318 aa5.88□□□□□ -1.47
UBE4A-203ENST00000545354 OSBPL9Q96SU4 736 aa5.88□□□□□ -1.47
UBE4A-203ENST00000545354 CASS4Q9NQ75 786 aa5.88□□□□□ -1.47
UBE4A-203ENST00000545354 LMCD1Q9NZU5 365 aa5.88□□□□□ -1.47
UBE4A-203ENST00000545354 ASAP1Q9ULH1 1129 aa5.88□□□□□ -1.47
UBE4A-203ENST00000545354 SQORQ9Y6N5 450 aa5.88□□□□□ -1.47
UBE4A-203ENST00000545354 ABCC8Q09428 1581 aa5.88□□□□□ -1.47
UBE4A-203ENST00000545354 ERCC6L2Q5T890 1561 aa5.88□□□□□ -1.47
UBE4A-203ENST00000545354 TOP2AP11388 1531 aaKnown RBP5.87□□□□□ -1.47
UBE4A-203ENST00000545354 KIF3BO15066 747 aa5.87□□□□□ -1.47
UBE4A-203ENST00000545354 P4HA2O15460 535 aa5.87□□□□□ -1.47
UBE4A-203ENST00000545354 TBC1D12O60347 775 aa5.87□□□□□ -1.47
UBE4A-203ENST00000545354 DIAPH2O60879 1101 aa5.87□□□□□ -1.47
UBE4A-203ENST00000545354 GCKP35557 465 aa5.87□□□□□ -1.47
UBE4A-203ENST00000545354 PRIM1P49642 420 aaKnown RBP5.87□□□□□ -1.47
UBE4A-203ENST00000545354 LAMB3Q13751 1172 aa5.87□□□□□ -1.47
UBE4A-203ENST00000545354 E2F4Q16254 413 aa5.87□□□□□ -1.47
UBE4A-203ENST00000545354 GNPTABQ3T906 1256 aa5.87□□□□□ -1.47
UBE4A-203ENST00000545354 NAALADL2Q58DX5 795 aa5.87□□□□□ -1.47
UBE4A-203ENST00000545354 GIGYF2Q6Y7W6 1299 aaKnown RBP5.87□□□□□ -1.47
UBE4A-203ENST00000545354 PACS2Q86VP3 889 aa5.87□□□□□ -1.47
UBE4A-203ENST00000545354 RELL1Q8IUW5 271 aa5.87□□□□□ -1.47
UBE4A-203ENST00000545354 MSANTD4Q8NCY6 345 aa5.87□□□□□ -1.47
UBE4A-203ENST00000545354 ZNF512BQ96KM6 892 aaPredicted RBP5.87□□□□□ -1.47
UBE4A-203ENST00000545354 CAPS2Q9BXY5 557 aa5.87□□□□□ -1.47
UBE4A-203ENST00000545354 MMADHCQ9H3L0 296 aaPredicted RBP5.87□□□□□ -1.47
UBE4A-203ENST00000545354 ZNF304Q9HCX3 659 aa5.87□□□□□ -1.47
UBE4A-203ENST00000545354 HDAC6Q9UBN7 1215 aa5.87□□□□□ -1.47
UBE4A-203ENST00000545354 PTPRGP23470 1445 aa5.87□□□□□ -1.47
UBE4A-203ENST00000545354 TLDC2A0PJX2 215 aa5.87□□□□□ -1.47
UBE4A-203ENST00000545354 CLASP2O75122 1294 aaKnown RBP5.87□□□□□ -1.47
UBE4A-203ENST00000545354 RPS6KA5O75582 802 aa5.87□□□□□ -1.47
UBE4A-203ENST00000545354 MYCLP1P12525 358 aaPredicted RBP5.87□□□□□ -1.47
UBE4A-203ENST00000545354 SKIP12755 728 aa5.87□□□□□ -1.47
UBE4A-203ENST00000545354 IDO1P14902 403 aa5.87□□□□□ -1.47
UBE4A-203ENST00000545354 MCM3P25205 808 aa5.87□□□□□ -1.47
UBE4A-203ENST00000545354 KIF5BP33176 963 aa5.87□□□□□ -1.47
UBE4A-203ENST00000545354 MATR3P43243 847 aaKnown RBP eCLIP5.87□□□□□ -1.47
UBE4A-203ENST00000545354 ARPC4P59998 168 aa5.87□□□□□ -1.47
UBE4A-203ENST00000545354 PABPC4Q13310 644 aaKnown RBP eCLIP5.87□□□□□ -1.47
UBE4A-203ENST00000545354 FKBP5Q13451 457 aaPredicted RBP5.87□□□□□ -1.47
UBE4A-203ENST00000545354 DHX8Q14562 1220 aaKnown RBP5.87□□□□□ -1.47
UBE4A-203ENST00000545354 TSGA10IPQ3SY00 556 aa5.87□□□□□ -1.47
UBE4A-203ENST00000545354 SPDYCQ5MJ68 293 aa5.87□□□□□ -1.47
UBE4A-203ENST00000545354 NXNQ6DKJ4 435 aa5.87□□□□□ -1.47
UBE4A-203ENST00000545354 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.87□□□□□ -1.47
UBE4A-203ENST00000545354 UHMK1Q8TAS1 419 aaKnown RBP5.87□□□□□ -1.47
UBE4A-203ENST00000545354 ACMSDQ8TDX5 336 aa5.87□□□□□ -1.47
UBE4A-203ENST00000545354 SH3TC2Q8TF17 1288 aa5.87□□□□□ -1.47
UBE4A-203ENST00000545354 IL17RAQ96F46 866 aa5.87□□□□□ -1.47
UBE4A-203ENST00000545354 DDX27Q96GQ7 796 aaKnown RBP5.87□□□□□ -1.47
UBE4A-203ENST00000545354 KCNH8Q96L42 1107 aa5.87□□□□□ -1.47
UBE4A-203ENST00000545354 CCDC114Q96M63 670 aa5.87□□□□□ -1.47
UBE4A-203ENST00000545354 TRERF1Q96PN7 1200 aa5.87□□□□□ -1.47
UBE4A-203ENST00000545354 BHMT2Q9H2M3 363 aa5.87□□□□□ -1.47
UBE4A-203ENST00000545354 SPTLC3Q9NUV7 552 aa5.87□□□□□ -1.47
UBE4A-203ENST00000545354 MKS1Q9NXB0 559 aa5.87□□□□□ -1.47
UBE4A-203ENST00000545354 H0YC42 278 aa5.86□□□□□ -1.47
UBE4A-203ENST00000545354 CPLX1O14810 134 aa5.86□□□□□ -1.47
UBE4A-203ENST00000545354 TTI1O43156 1089 aa5.86□□□□□ -1.47
UBE4A-203ENST00000545354 AHCYL1O43865 530 aa5.86□□□□□ -1.47
UBE4A-203ENST00000545354 NUDT7P0C024 238 aa5.86□□□□□ -1.47
UBE4A-203ENST00000545354 CASP2P42575 452 aa5.86□□□□□ -1.47
UBE4A-203ENST00000545354 RAB27AP51159 221 aa5.86□□□□□ -1.47
UBE4A-203ENST00000545354 TPD52P55327 224 aaPredicted RBP5.86□□□□□ -1.47
UBE4A-203ENST00000545354 CORO7P57737 925 aa5.86□□□□□ -1.47
UBE4A-203ENST00000545354 MPP3Q13368 585 aa5.86□□□□□ -1.47
UBE4A-203ENST00000545354 TUBA3CQ13748 450 aa5.86□□□□□ -1.47
UBE4A-203ENST00000545354 TMEM110Q86TL2 294 aa5.86□□□□□ -1.47
UBE4A-203ENST00000545354 C11orf74Q86VG3 221 aa5.86□□□□□ -1.47
UBE4A-203ENST00000545354 PROSER2Q86WR7 435 aaPredicted RBP5.86□□□□□ -1.47
UBE4A-203ENST00000545354 ZFPM2Q8WW38 1151 aa5.86□□□□□ -1.47
UBE4A-203ENST00000545354 RPGRQ92834 1020 aaKnown RBP5.86□□□□□ -1.47
UBE4A-203ENST00000545354 TSGA10Q9BZW7 698 aa5.86□□□□□ -1.47
UBE4A-203ENST00000545354 CCDC68Q9H2F9 335 aa5.86□□□□□ -1.47
UBE4A-203ENST00000545354 PANK3Q9H999 370 aa5.86□□□□□ -1.47
UBE4A-203ENST00000545354 DISC1Q9NRI5 854 aa5.86□□□□□ -1.47
UBE4A-203ENST00000545354 UBAP1Q9NZ09 502 aa5.86□□□□□ -1.47
UBE4A-203ENST00000545354 KIF13AQ9H1H9 1805 aa5.86□□□□□ -1.47
UBE4A-203ENST00000545354 TARSL2A2RTX5 802 aaKnown RBP5.86□□□□□ -1.47
UBE4A-203ENST00000545354 GTPBP10A4D1E9 387 aaKnown RBP5.86□□□□□ -1.47
UBE4A-203ENST00000545354 DIAPH1O60610 1272 aaKnown RBP5.86□□□□□ -1.47
UBE4A-203ENST00000545354 ENPP1P22413 925 aa5.86□□□□□ -1.47
UBE4A-203ENST00000545354 IL4RP24394 825 aa5.86□□□□□ -1.47
UBE4A-203ENST00000545354 S100A5P33763 92 aa5.86□□□□□ -1.47
UBE4A-203ENST00000545354 CCT8P50990 548 aa5.86□□□□□ -1.47
UBE4A-203ENST00000545354 MECOMQ03112 1051 aa5.86□□□□□ -1.47
UBE4A-203ENST00000545354 INAQ16352 499 aa5.86□□□□□ -1.47
UBE4A-203ENST00000545354 CCDC57Q2TAC2 916 aa5.86□□□□□ -1.47
UBE4A-203ENST00000545354 VARS2Q5ST30 1063 aaKnown RBP5.86□□□□□ -1.47
UBE4A-203ENST00000545354 ARHGAP22Q7Z5H3 698 aa5.86□□□□□ -1.47
UBE4A-203ENST00000545354 SKAP1Q86WV1 359 aa5.86□□□□□ -1.47
UBE4A-203ENST00000545354 CCDC50Q8IVM0 306 aa5.86□□□□□ -1.47
UBE4A-203ENST00000545354 ARL10Q8N8L6 244 aa5.86□□□□□ -1.47
UBE4A-203ENST00000545354 SUN5Q8TC36 379 aa5.86□□□□□ -1.47
UBE4A-203ENST00000545354 OXER1Q8TDS5 423 aa5.86□□□□□ -1.47
UBE4A-203ENST00000545354 WHAMMQ8TF30 809 aa5.86□□□□□ -1.47
UBE4A-203ENST00000545354 TBC1D5Q92609 795 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms