RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 SPOCK3Q9BQ16 436 aa3.42□□□□□ -1.86
TRAV1-1-201ENST00000542354 RGPD8O14715 1765 aaPredicted RBP3.42□□□□□ -1.86
TRAV1-1-201ENST00000542354 PAPPA2Q9BXP8 1791 aa3.42□□□□□ -1.86
TRAV1-1-201ENST00000542354 LMO7Q8WWI1 1683 aa3.42□□□□□ -1.86
TRAV1-1-201ENST00000542354 AKAP11Q9UKA4 1901 aa3.42□□□□□ -1.86
TRAV1-1-201ENST00000542354 ITSN1Q15811 1721 aa3.41□□□□□ -1.86
TRAV1-1-201ENST00000542354 TIAM2Q8IVF5 1701 aa3.41□□□□□ -1.86
TRAV1-1-201ENST00000542354 CCDC88AQ3V6T2 1871 aa3.41□□□□□ -1.86
TRAV1-1-201ENST00000542354 PTPRZ1P23471 2315 aaPredicted RBP3.41□□□□□ -1.86
TRAV1-1-201ENST00000542354 USP54Q70EL1 1684 aa3.41□□□□□ -1.86
TRAV1-1-201ENST00000542354 FAM155AB1AL88 458 aaPredicted RBP3.41□□□□□ -1.86
TRAV1-1-201ENST00000542354 GPR37L1O60883 481 aa3.41□□□□□ -1.86
TRAV1-1-201ENST00000542354 ZNF157P51786 506 aaPredicted RBP3.41□□□□□ -1.86
TRAV1-1-201ENST00000542354 SKIV2LQ15477 1246 aaKnown RBP3.41□□□□□ -1.86
TRAV1-1-201ENST00000542354 LYPD4Q6UWN0 246 aa3.41□□□□□ -1.86
TRAV1-1-201ENST00000542354 AMIGO3Q86WK7 504 aa3.41□□□□□ -1.86
TRAV1-1-201ENST00000542354 GOLGA6L1Q8N7Z2 621 aa3.41□□□□□ -1.86
TRAV1-1-201ENST00000542354 DDX54Q8TDD1 881 aaKnown RBP3.41□□□□□ -1.86
TRAV1-1-201ENST00000542354 ATXN2LQ8WWM7 1075 aaKnown RBP3.41□□□□□ -1.86
TRAV1-1-201ENST00000542354 SIRT1Q96EB6 747 aa3.41□□□□□ -1.86
TRAV1-1-201ENST00000542354 ZNF837Q96EG3 531 aaPredicted RBP3.41□□□□□ -1.86
TRAV1-1-201ENST00000542354 AGBL1Q96MI9 1066 aa3.41□□□□□ -1.86
TRAV1-1-201ENST00000542354 FAM161BQ96MY7 647 aa3.41□□□□□ -1.86
TRAV1-1-201ENST00000542354 CDX2Q99626 313 aaPredicted RBP3.41□□□□□ -1.86
TRAV1-1-201ENST00000542354 CFHR5Q9BXR6 569 aa3.41□□□□□ -1.86
TRAV1-1-201ENST00000542354 ZNF395Q9H8N7 513 aaPredicted RBP3.41□□□□□ -1.86
TRAV1-1-201ENST00000542354 ZNF408Q9H9D4 720 aa3.41□□□□□ -1.86
TRAV1-1-201ENST00000542354 TRIM17Q9Y577 477 aa3.41□□□□□ -1.86
TRAV1-1-201ENST00000542354 ANKARQ7Z5J8 1434 aa3.41□□□□□ -1.86
TRAV1-1-201ENST00000542354 TRPM7Q96QT4 1865 aa3.41□□□□□ -1.86
TRAV1-1-201ENST00000542354 RBBP6Q7Z6E9 1792 aaKnown RBP3.4□□□□□ -1.86
TRAV1-1-201ENST00000542354 ANKRD36BQ8N2N9 1353 aa3.4□□□□□ -1.86
TRAV1-1-201ENST00000542354 PLEKHH1Q9ULM0 1364 aa3.4□□□□□ -1.86
TRAV1-1-201ENST00000542354 QRICH2Q9H0J4 1663 aa3.4□□□□□ -1.86
TRAV1-1-201ENST00000542354 SMIM22K7EJ46 135 aa3.4□□□□□ -1.87
TRAV1-1-201ENST00000542354 MEN1O00255 615 aa3.4□□□□□ -1.87
TRAV1-1-201ENST00000542354 IL2RBP14784 551 aa3.4□□□□□ -1.87
TRAV1-1-201ENST00000542354 LMOD1P29536 600 aaPredicted RBP3.4□□□□□ -1.87
TRAV1-1-201ENST00000542354 RAB15P59190 212 aa3.4□□□□□ -1.87
TRAV1-1-201ENST00000542354 SRPK2P78362 688 aaKnown RBP3.4□□□□□ -1.87
TRAV1-1-201ENST00000542354 CTDSPL2Q05D32 466 aa3.4□□□□□ -1.87
TRAV1-1-201ENST00000542354 SH3D19Q5HYK7 790 aa3.4□□□□□ -1.87
TRAV1-1-201ENST00000542354 RTL5Q5HYW3 569 aaPredicted RBP3.4□□□□□ -1.87
TRAV1-1-201ENST00000542354 TRAPPC3LQ5T215 181 aa3.4□□□□□ -1.87
TRAV1-1-201ENST00000542354 PPIP5K1Q6PFW1 1433 aa3.4□□□□□ -1.87
TRAV1-1-201ENST00000542354 USP50Q70EL3 339 aaPredicted RBP3.4□□□□□ -1.87
TRAV1-1-201ENST00000542354 TAS1R3Q7RTX0 852 aa3.4□□□□□ -1.87
TRAV1-1-201ENST00000542354 PRICKLE2Q7Z3G6 844 aa3.4□□□□□ -1.87
TRAV1-1-201ENST00000542354 TDHQ8IZJ6 230 aa3.4□□□□□ -1.87
TRAV1-1-201ENST00000542354 WHAMMQ8TF30 809 aa3.4□□□□□ -1.87
TRAV1-1-201ENST00000542354 CFAP54Q96N23 3096 aa3.4□□□□□ -1.87
TRAV1-1-201ENST00000542354 ASB2Q96Q27 587 aa3.4□□□□□ -1.87
TRAV1-1-201ENST00000542354 GAS2L1Q99501 681 aaPredicted RBP3.4□□□□□ -1.87
TRAV1-1-201ENST00000542354 OXCT2Q9BYC2 517 aaPredicted RBP3.4□□□□□ -1.87
TRAV1-1-201ENST00000542354 NUCKS1Q9H1E3 243 aaKnown RBP3.4□□□□□ -1.87
TRAV1-1-201ENST00000542354 KCNH6Q9H252 994 aa3.4□□□□□ -1.87
TRAV1-1-201ENST00000542354 TAOK3Q9H2K8 898 aa3.4□□□□□ -1.87
TRAV1-1-201ENST00000542354 EPHX3Q9H6B9 360 aa3.4□□□□□ -1.87
TRAV1-1-201ENST00000542354 ADAMTSL1Q8N6G6 1762 aa3.4□□□□□ -1.87
TRAV1-1-201ENST00000542354 RNF123Q5XPI4 1314 aa3.4□□□□□ -1.87
TRAV1-1-201ENST00000542354 USP9XQ93008 2570 aaPredicted RBP3.4□□□□□ -1.87
TRAV1-1-201ENST00000542354 ABCC6O95255 1503 aa3.39□□□□□ -1.87
TRAV1-1-201ENST00000542354 ABCC11Q96J66 1382 aa3.39□□□□□ -1.87
TRAV1-1-201ENST00000542354 LY75O60449 1722 aa3.39□□□□□ -1.87
TRAV1-1-201ENST00000542354 SPDYE3A6NKU9 549 aa3.39□□□□□ -1.87
TRAV1-1-201ENST00000542354 ESPNB1AK53 854 aa3.39□□□□□ -1.87
TRAV1-1-201ENST00000542354 ERVH48-1M5A8F1 160 aa3.39□□□□□ -1.87
TRAV1-1-201ENST00000542354 OIP5O43482 229 aa3.39□□□□□ -1.87
TRAV1-1-201ENST00000542354 AP1G2O75843 785 aa3.39□□□□□ -1.87
TRAV1-1-201ENST00000542354 MYCP01106 439 aaPredicted RBP3.39□□□□□ -1.87
TRAV1-1-201ENST00000542354 F11P03951 625 aa3.39□□□□□ -1.87
TRAV1-1-201ENST00000542354 UBTFP17480 764 aaKnown RBP3.39□□□□□ -1.87
TRAV1-1-201ENST00000542354 AMPD1P23109 780 aa3.39□□□□□ -1.87
TRAV1-1-201ENST00000542354 NR6A1Q15406 480 aa3.39□□□□□ -1.87
TRAV1-1-201ENST00000542354 EFHC2Q5JST6 749 aa3.39□□□□□ -1.87
TRAV1-1-201ENST00000542354 GNASQ5JWF2 1037 aa3.39□□□□□ -1.87
TRAV1-1-201ENST00000542354 FOXD4L5Q5VV16 416 aaPredicted RBP3.39□□□□□ -1.87
TRAV1-1-201ENST00000542354 CC2D2BQ6DHV5 1058 aa3.39□□□□□ -1.87
TRAV1-1-201ENST00000542354 FIGNL1Q6PIW4 674 aa3.39□□□□□ -1.87
TRAV1-1-201ENST00000542354 OTOP1Q7RTM1 612 aa3.39□□□□□ -1.87
TRAV1-1-201ENST00000542354 GDF15Q99988 308 aa3.39□□□□□ -1.87
TRAV1-1-201ENST00000542354 TIMMDC1Q9NPL8 285 aa3.39□□□□□ -1.87
TRAV1-1-201ENST00000542354 POLR3EQ9NVU0 708 aa3.39□□□□□ -1.87
TRAV1-1-201ENST00000542354 PTPN22Q9Y2R2 807 aa3.39□□□□□ -1.87
TRAV1-1-201ENST00000542354 CNTNAP4Q9C0A0 1308 aa3.39□□□□□ -1.87
TRAV1-1-201ENST00000542354 LTBP3Q9NS15 1303 aa3.39□□□□□ -1.87
TRAV1-1-201ENST00000542354 ZNF292O60281 2723 aa3.38□□□□□ -1.87
TRAV1-1-201ENST00000542354 CFAP47Q6ZTR5 3102 aa3.38□□□□□ -1.87
TRAV1-1-201ENST00000542354 A0A1B0GTH6 734 aa3.38□□□□□ -1.87
TRAV1-1-201ENST00000542354 SPATA31C2B4DYI2 1134 aa3.38□□□□□ -1.87
TRAV1-1-201ENST00000542354 H0YIN7 160 aa3.38□□□□□ -1.87
TRAV1-1-201ENST00000542354 GNB5O14775 395 aa3.38□□□□□ -1.87
TRAV1-1-201ENST00000542354 FOSL2P15408 326 aa3.38□□□□□ -1.87
TRAV1-1-201ENST00000542354 MRPS5P82675 430 aaKnown RBP3.38□□□□□ -1.87
TRAV1-1-201ENST00000542354 CLN3Q13286 438 aa3.38□□□□□ -1.87
TRAV1-1-201ENST00000542354 GAS6Q14393 721 aa3.38□□□□□ -1.87
TRAV1-1-201ENST00000542354 TMEM259Q4ZIN3 620 aa3.38□□□□□ -1.87
TRAV1-1-201ENST00000542354 GPC2Q8N158 579 aa3.38□□□□□ -1.87
TRAV1-1-201ENST00000542354 C2orf69Q8N8R5 385 aa3.38□□□□□ -1.87
TRAV1-1-201ENST00000542354 GTPBP3Q969Y2 492 aaKnown RBP3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms